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The map label for this gene is rpsF [H]

Identifier: 209554099

GI number: 209554099

Start: 770579

End: 771061

Strand: Reverse

Name: rpsF [H]

Synonym: UUR10_0645

Alternate gene names: 209554099

Gene position: 771061-770579 (Counterclockwise)

Preceding gene: 209554170

Following gene: 209554187

Centisome position: 88.17

GC content: 30.43

Gene sequence:

>483_bases
ATGGCAAAATACGAAATTATGTTAGTTGTTCGTGGTGATTTAGATCAAGAACAAGCTAACAAAGTTGCAAATGAATTAAA
AGCAACTTTAAAAAACACAGAAGTTAAAGAAAATAATTATGAAGGTGTGCAACAATTAGCTTATGAAATCAACAAGCTAA
AAACTGCTTATCGTTATGTTTATAATTTTGAAACAACTGATGTTAGTTTAATTAATGAATTTAGACGTTTAGCAATTATT
AATAAAAATGTATTAAGACACATTATTATTAATTTAGAAAAAGATTACGGTTACAAAGCAACTGTTAATGCTAAAAAAGT
ACAACGTAATGAAAAACGTGCTGAAGTTTATGTACGTCAAAAAGAAGAAGCAGAACGTCGTGCAGCAGAACGTCAAGCAG
CTTATGAAGCAATGAAGGCTGAACGTGAAGCAGCTGGGCTACCAGTTAAAGAATTTGTTAAAGGTGCAAATTCAAAACGT
TAA

Upstream 100 bases:

>100_bases
ATTTTAACGTTTATTCAACAATAATTATTGGACTAAACACTCTTGCTAATTTTAGAATTAACGAAATTAGCTATTAATAT
CCATAAGAGGAGCAAAATAA

Downstream 100 bases:

>100_bases
AAATAAAAATATTTTAATTTAACTAAAAAGATATTGAGGCGTAAAATGAACAAAGTAATTTTGATTGGTAATCTAGTTCG
TGATCCAGAAGCTCGTCAAA

Product: 30S ribosomal protein S6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYEGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAII
NKNVLRHIIINLEKDYGYKATVNAKKVQRNEKRAEVYVRQKEEAERRAAERQAAYEAMKAEREAAGLPVKEFVKGANSKR

Sequences:

>Translated_160_residues
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYEGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAII
NKNVLRHIIINLEKDYGYKATVNAKKVQRNEKRAEVYVRQKEEAERRAAERQAAYEAMKAEREAAGLPVKEFVKGANSKR
>Mature_159_residues
AKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYEGVQQLAYEINKLKTAYRYVYNFETTDVSLINEFRRLAIIN
KNVLRHIIINLEKDYGYKATVNAKKVQRNEKRAEVYVRQKEEAERRAAERQAAYEAMKAEREAAGLPVKEFVKGANSKR

Specific function: Binds together with S18 to 16S ribosomal RNA [H]

COG id: COG0360

COG function: function code J; Ribosomal protein S6

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S6P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000529
- InterPro:   IPR020814
- InterPro:   IPR014717 [H]

Pfam domain/function: PF01250 Ribosomal_S6 [H]

EC number: NA

Molecular weight: Translated: 18619; Mature: 18488

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYEGVQQLAYEINKLKTAYRYV
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNAKKVQRNEKRAEVYVRQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
KEEAERRAAERQAAYEAMKAEREAAGLPVKEFVKGANSKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
>Mature Secondary Structure 
AKYEIMLVVRGDLDQEQANKVANELKATLKNTEVKENNYEGVQQLAYEINKLKTAYRYV
CCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YNFETTDVSLINEFRRLAIINKNVLRHIIINLEKDYGYKATVNAKKVQRNEKRAEVYVRQ
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHH
KEEAERRAAERQAAYEAMKAEREAAGLPVKEFVKGANSKR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA