| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is dut [H]
Identifier: 209551913
GI number: 209551913
Start: 4511108
End: 4511578
Strand: Reverse
Name: dut [H]
Synonym: Rleg2_4346
Alternate gene names: 209551913
Gene position: 4511578-4511108 (Counterclockwise)
Preceding gene: 209551915
Following gene: 209551912
Centisome position: 99.42
GC content: 67.09
Gene sequence:
>471_bases ATGACCATTCATCATGATCTGAGACCGACGCTGAACCTCATCCGCCTGGCCAATGGCGAAGGCCTCGACCTGCCCGCCTA TGAAAGCAAGGGGGCGGCCGGCATGGACCTGCGCGCCGCCGTCGACGAGGCCGCACCGCTGACGCTTCAGCCCGGCAAAC GGGCGCTGGTGCCGACCGGCTTCATCTTCGAAATCCCCGAAGGTTTCGAAGGCCAGGTGCGGCCGCGCTCCGGCCTCGCC TTCAAACACGGCATCACCTGCCTGAATTCGCCCGGCACCGTCGACAGCGACTATCGCGGCGAGGTGAAGGTGCTGCTCGC CAACCTCGGCGACGAAGCCTTCACCGTCGAGCGCGGTATGCGCATCGCCCAGATGGTGATCGCGCCGGTGACGCAGATGC GGGTGGCCGAAAGTGCCGCCGCAAGCGAGACGACACGCGGCGCCGGTGGCTTCGGCTCCACCGGCGTGTGA
Upstream 100 bases:
>100_bases TTTCGGCCATACTATGAATCCTGTGGAATTGCCGCGTATCTAGCGATTAAAGCCCGGCATTGCAATTGACCTCGGCGTTC GCTGCGCAAAGTAATGGGCC
Downstream 100 bases:
>100_bases TGACAAAGCGCCCCGACAGCGCGGGCCTCTTCTTCCGGCAGGATTATTTCGGCGACCCGGCCGGCTGGGCGGCCTTGGTG CGCCTGCTCCAGGATATTTT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTIHHDLRPTLNLIRLANGEGLDLPAYESKGAAGMDLRAAVDEAAPLTLQPGKRALVPTGFIFEIPEGFEGQVRPRSGLA FKHGITCLNSPGTVDSDYRGEVKVLLANLGDEAFTVERGMRIAQMVIAPVTQMRVAESAAASETTRGAGGFGSTGV
Sequences:
>Translated_156_residues MTIHHDLRPTLNLIRLANGEGLDLPAYESKGAAGMDLRAAVDEAAPLTLQPGKRALVPTGFIFEIPEGFEGQVRPRSGLA FKHGITCLNSPGTVDSDYRGEVKVLLANLGDEAFTVERGMRIAQMVIAPVTQMRVAESAAASETTRGAGGFGSTGV >Mature_155_residues TIHHDLRPTLNLIRLANGEGLDLPAYESKGAAGMDLRAAVDEAAPLTLQPGKRALVPTGFIFEIPEGFEGQVRPRSGLAF KHGITCLNSPGTVDSDYRGEVKVLLANLGDEAFTVERGMRIAQMVIAPVTQMRVAESAAASETTRGAGGFGSTGV
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=145, Percent_Identity=42.7586206896552, Blast_Score=98, Evalue=2e-21, Organism=Homo sapiens, GI4503423, Length=145, Percent_Identity=42.7586206896552, Blast_Score=98, Evalue=3e-21, Organism=Homo sapiens, GI70906441, Length=145, Percent_Identity=42.7586206896552, Blast_Score=97, Evalue=7e-21, Organism=Escherichia coli, GI1790071, Length=138, Percent_Identity=42.0289855072464, Blast_Score=108, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71988561, Length=153, Percent_Identity=43.7908496732026, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6319729, Length=135, Percent_Identity=41.4814814814815, Blast_Score=89, Evalue=3e-19, Organism=Drosophila melanogaster, GI24583610, Length=132, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI19921126, Length=132, Percent_Identity=41.6666666666667, Blast_Score=87, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16434; Mature: 16303
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIHHDLRPTLNLIRLANGEGLDLPAYESKGAAGMDLRAAVDEAAPLTLQPGKRALVPTG CCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCEECCCC FIFEIPEGFEGQVRPRSGLAFKHGITCLNSPGTVDSDYRGEVKVLLANLGDEAFTVERGM EEEECCCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH RIAQMVIAPVTQMRVAESAAASETTRGAGGFGSTGV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure TIHHDLRPTLNLIRLANGEGLDLPAYESKGAAGMDLRAAVDEAAPLTLQPGKRALVPTG CCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCCEECCCC FIFEIPEGFEGQVRPRSGLAFKHGITCLNSPGTVDSDYRGEVKVLLANLGDEAFTVERGM EEEECCCCCCCCCCCCCCCCHHHCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEHHHHH RIAQMVIAPVTQMRVAESAAASETTRGAGGFGSTGV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA