| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551879
Identifier: 209551879
GI number: 209551879
Start: 4477694
End: 4478773
Strand: Reverse
Name: 209551879
Synonym: Rleg2_4312
Alternate gene names: NA
Gene position: 4478773-4477694 (Counterclockwise)
Preceding gene: 209551880
Following gene: 209551877
Centisome position: 98.7
GC content: 64.44
Gene sequence:
>1080_bases ATGATGCGAACCGCCGCGATCAACCGACGCAACTTCGTCAAGGCGGCAGGGATCGGCTTCCTTGCGGGCTTGACGCCACG GTCGCTGATGGCGCTCGAACGCGCCGATGCGGTCTATGCCTCGGGCATTCGTGCCGCGAACGGTTCCTTTGCGGTTGCGA CCGTGACCGAGCGCGGCGAGATCATCGACCAGGTGGCGCTTCCCGCCCGGGCCCACGGCATGGCCTTCAGCGCCGTCACC GGCAGGACCGTCGCCTTCGCCCGCCGGCCGGGCACCTATGCGATGATTTTCGATCCCCGCAATAAGGGCGAACCGATCGT CATCAGCTCGCGGGAAGACCGGCATTTCTACGGCCACGGCGCCTTCTCTCCCGATGGTCGTTTGCTCTACGCCAGCGAGA ACGATTTCGACGGCAATCGCGGCATGATCGGCCTCTACGACGCCACCGACCGCTTCACCCGTATCGGCGAATTCGAGACC TACGGCATCGGCCCGCACGACATGACGGTCTCCGACGACGGACGTCTTCTGATCGTCGCCAATGGCGGCATCGAAACACA TCCGGATTTCGGCCGCACCAAGCTCAATCTCGGAGAGATGCAGCCGTCGCTGGCGCTGATCGATGCCGCCACCGGCGCTC TGGTCGAAAAACATGTGCTGTCGGCGGAATGGGCAGAACTCTCCACCCGCCACGTCGATCTCGACGACAAGGGCCGCATC TGGTTTGCCTGCCAGTACGAAGGCCACCGCAAGGATTTGCCGCCGCTCGTCGGCCATTTCGCCAAGGGCGAAGAGCTTTC CTTCATCGATCTGCCGGAGCAGACGACGCGCAGGCTTGCCAATTACGTCGGCGCGATCGCCGTCAATCGCAGCGAGGGCA TCGTCGGCATCACCTCGCCGAAGGGCGGCGTCTCGGTGACCCTCGACGCAAGGACGGGCAAGGTGCTGGCCGAGACGGCC GTTCCGGACGCGGCCGGCATTGCGCCGGCAAAAAGCGGCTTTGCCGTCTCCTCCTATAACGGCGATTTCCTGTCGACCCG CAGCGACGTCGCCTGGGACCAGCATATCGTGCGGATCTAG
Upstream 100 bases:
>100_bases CTTGCCGAGAGCCGCGACCTGATCACCCGGATCAGCGACGAATATGGCGCCGCGATCGGCCTTTCGGCCGGCTTTTCCTT TTCTGACGGGGACTGAAGCG
Downstream 100 bases:
>100_bases CCGGCGCGTGAATAGGCTTTCTGCTCGGCGCTGATGCTCGAGGCCGCCGCCCTGGCCGCCTCATGCAGCCATTCGTTTCC TCGTGCCTTGATATCCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MMRTAAINRRNFVKAAGIGFLAGLTPRSLMALERADAVYASGIRAANGSFAVATVTERGEIIDQVALPARAHGMAFSAVT GRTVAFARRPGTYAMIFDPRNKGEPIVISSREDRHFYGHGAFSPDGRLLYASENDFDGNRGMIGLYDATDRFTRIGEFET YGIGPHDMTVSDDGRLLIVANGGIETHPDFGRTKLNLGEMQPSLALIDAATGALVEKHVLSAEWAELSTRHVDLDDKGRI WFACQYEGHRKDLPPLVGHFAKGEELSFIDLPEQTTRRLANYVGAIAVNRSEGIVGITSPKGGVSVTLDARTGKVLAETA VPDAAGIAPAKSGFAVSSYNGDFLSTRSDVAWDQHIVRI
Sequences:
>Translated_359_residues MMRTAAINRRNFVKAAGIGFLAGLTPRSLMALERADAVYASGIRAANGSFAVATVTERGEIIDQVALPARAHGMAFSAVT GRTVAFARRPGTYAMIFDPRNKGEPIVISSREDRHFYGHGAFSPDGRLLYASENDFDGNRGMIGLYDATDRFTRIGEFET YGIGPHDMTVSDDGRLLIVANGGIETHPDFGRTKLNLGEMQPSLALIDAATGALVEKHVLSAEWAELSTRHVDLDDKGRI WFACQYEGHRKDLPPLVGHFAKGEELSFIDLPEQTTRRLANYVGAIAVNRSEGIVGITSPKGGVSVTLDARTGKVLAETA VPDAAGIAPAKSGFAVSSYNGDFLSTRSDVAWDQHIVRI >Mature_359_residues MMRTAAINRRNFVKAAGIGFLAGLTPRSLMALERADAVYASGIRAANGSFAVATVTERGEIIDQVALPARAHGMAFSAVT GRTVAFARRPGTYAMIFDPRNKGEPIVISSREDRHFYGHGAFSPDGRLLYASENDFDGNRGMIGLYDATDRFTRIGEFET YGIGPHDMTVSDDGRLLIVANGGIETHPDFGRTKLNLGEMQPSLALIDAATGALVEKHVLSAEWAELSTRHVDLDDKGRI WFACQYEGHRKDLPPLVGHFAKGEELSFIDLPEQTTRRLANYVGAIAVNRSEGIVGITSPKGGVSVTLDARTGKVLAETA VPDAAGIAPAKSGFAVSSYNGDFLSTRSDVAWDQHIVRI
Specific function: Unknown
COG id: COG3490
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38681; Mature: 38681
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRTAAINRRNFVKAAGIGFLAGLTPRSLMALERADAVYASGIRAANGSFAVATVTERGE CCCCCCCCCCCCEECCCCHHEECCCHHHHHHHHHHCHHHHCCEEECCCCEEEEEECCCCH IIDQVALPARAHGMAFSAVTGRTVAFARRPGTYAMIFDPRNKGEPIVISSREDRHFYGHG HHHHHCCCCHHCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEECC AFSPDGRLLYASENDFDGNRGMIGLYDATDRFTRIGEFETYGIGPHDMTVSDDGRLLIVA CCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCEEECCCCCEEEEE NGGIETHPDFGRTKLNLGEMQPSLALIDAATGALVEKHVLSAEWAELSTRHVDLDDKGRI CCCCCCCCCCCCEEEEHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCE WFACQYEGHRKDLPPLVGHFAKGEELSFIDLPEQTTRRLANYVGAIAVNRSEGIVGITSP EEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCEEEEECC KGGVSVTLDARTGKVLAETAVPDAAGIAPAKSGFAVSSYNGDFLSTRSDVAWDQHIVRI CCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCEEECC >Mature Secondary Structure MMRTAAINRRNFVKAAGIGFLAGLTPRSLMALERADAVYASGIRAANGSFAVATVTERGE CCCCCCCCCCCCEECCCCHHEECCCHHHHHHHHHHCHHHHCCEEECCCCEEEEEECCCCH IIDQVALPARAHGMAFSAVTGRTVAFARRPGTYAMIFDPRNKGEPIVISSREDRHFYGHG HHHHHCCCCHHCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEECC AFSPDGRLLYASENDFDGNRGMIGLYDATDRFTRIGEFETYGIGPHDMTVSDDGRLLIVA CCCCCCEEEEEECCCCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCEEECCCCCEEEEE NGGIETHPDFGRTKLNLGEMQPSLALIDAATGALVEKHVLSAEWAELSTRHVDLDDKGRI CCCCCCCCCCCCEEEEHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCE WFACQYEGHRKDLPPLVGHFAKGEELSFIDLPEQTTRRLANYVGAIAVNRSEGIVGITSP EEEEEECCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHHHEEEEEECCCCEEEEECC KGGVSVTLDARTGKVLAETAVPDAAGIAPAKSGFAVSSYNGDFLSTRSDVAWDQHIVRI CCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA