| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yigI [C]
Identifier: 209551877
GI number: 209551877
Start: 4475940
End: 4476389
Strand: Reverse
Name: yigI [C]
Synonym: Rleg2_4310
Alternate gene names: 209551877
Gene position: 4476389-4475940 (Counterclockwise)
Preceding gene: 209551879
Following gene: 209551876
Centisome position: 98.64
GC content: 61.33
Gene sequence:
>450_bases ATGAGCGAGACTGACAGGGGCGATTTCCGCGCGCGAATCCGCCGCAATTTTGCGCGCCAGGCGGCGATGGAGACGATCGG CGCGGAGCTGACGCGCGTCGAGCACGGCGTCGTCGAGATCGAGCTTCCCTTCGACGTCAAACTGACACAGCAGCACGGCA TCCTGCATGCAGGCATCATTTCCGCAGCGCTCGATTCAGCCTGCGGCTTTGCCGCCTACAGCGTCATTGACCCCGAAGCT TCGATCCTGACGATCGAGTTCAAGGTCAATCTCATGTCGCCGGGGCGTGGCGATCGTTTCCTGTTTCGCGGCGAAATCAC CAAACCCGGCTCCACCATCATCGTTGCCGACGGACGAGGCTACGCGATCAGCGACGGGCCGGCGAAACTCATCGCCTCCA TGACCGGGACGATGATGGTGATCCGCGGTAGAGAAGGAATTACGGGATGA
Upstream 100 bases:
>100_bases CGGCCGCAGCTTTCCATCGGCGCTGAGACCGATTTCAGCAACGTGCAGCTTGTCGAATCCGGCCCGCCATGCCACTTTCC CGGCTGCAAGAGGGGCAGAC
Downstream 100 bases:
>100_bases AGTTCGAGTTGAAGTCGGTCGCGGGTAAATCCATGCTGTTCGTCATGGCGGCAGAGGCCGAATACGGCCCCTTCCTGCGC TCGCGCATCGAACCCCTGAT
Product: thioesterase
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Thioesterase; Phenylacetic Acid Degradation-Like Protein; Phenylacetic Acid Degradation Protein PaaI
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSETDRGDFRARIRRNFARQAAMETIGAELTRVEHGVVEIELPFDVKLTQQHGILHAGIISAALDSACGFAAYSVIDPEA SILTIEFKVNLMSPGRGDRFLFRGEITKPGSTIIVADGRGYAISDGPAKLIASMTGTMMVIRGREGITG
Sequences:
>Translated_149_residues MSETDRGDFRARIRRNFARQAAMETIGAELTRVEHGVVEIELPFDVKLTQQHGILHAGIISAALDSACGFAAYSVIDPEA SILTIEFKVNLMSPGRGDRFLFRGEITKPGSTIIVADGRGYAISDGPAKLIASMTGTMMVIRGREGITG >Mature_148_residues SETDRGDFRARIRRNFARQAAMETIGAELTRVEHGVVEIELPFDVKLTQQHGILHAGIISAALDSACGFAAYSVIDPEAS ILTIEFKVNLMSPGRGDRFLFRGEITKPGSTIIVADGRGYAISDGPAKLIASMTGTMMVIRGREGITG
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16054; Mature: 15923
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETDRGDFRARIRRNFARQAAMETIGAELTRVEHGVVEIELPFDVKLTQQHGILHAGII CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCEEECCCCCEEHHHHH SAALDSACGFAAYSVIDPEASILTIEFKVNLMSPGRGDRFLFRGEITKPGSTIIVADGRG HHHHHHCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCC YAISDGPAKLIASMTGTMMVIRGREGITG EEECCCHHHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure SETDRGDFRARIRRNFARQAAMETIGAELTRVEHGVVEIELPFDVKLTQQHGILHAGII CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCEEECCCCCEEHHHHH SAALDSACGFAAYSVIDPEASILTIEFKVNLMSPGRGDRFLFRGEITKPGSTIIVADGRG HHHHHHCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCCC YAISDGPAKLIASMTGTMMVIRGREGITG EEECCCHHHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA