| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yejA [C]
Identifier: 209551703
GI number: 209551703
Start: 4312042
End: 4313874
Strand: Direct
Name: yejA [C]
Synonym: Rleg2_4132
Alternate gene names: 209551703
Gene position: 4312042-4313874 (Clockwise)
Preceding gene: 209551696
Following gene: 209551704
Centisome position: 95.02
GC content: 57.06
Gene sequence:
>1833_bases ATGACGGCTTTGTGGTCGAAGATCGGTTTGTTTGTATCGCTTGCGGGTGTCTTGGCGCCCATGACCGGAACGGGTCAGGA CCAGCCGTTTCAGATCGGCAGTTCCGTCATCAGTGAGATGAAGTACAAGCAGGGCTTTGCGCATTTCGACTACGTCAATC CCAATGCCCCAAAAGGCGGAGACCTGCGCCTTTCTGCAAGCGGCGCTTTCGACACCTTCAATCCTATCCTTGCCAAAGGC CAGATAGCGGCAGGGCTCTCGCTCGTCTACGACACGTTGATGAAGCCGACCGATGACGAGCTCCTTGTCTCCTATGGTCT GCTTGCCGAGGGGCTGTCCTATCCGGATGACGTCTCAAGCGCGACCTTTCGCCTACGCAAGGAAGCGAAATGGGCGGATG GCCAGCCGATAACGCCCGACGACGTCATCTTCAGTCTGGATAAGACGAAGGAATTAAACGCTGCCACCGCGAACTATTAC CGGCACGTGGTGAAGGCCGAAAAGACGGGCGATCGCGACGTCACTTTCACCTTCGACGAAAAGAACAATCGCGAGCTCCC GAATATTCTCGGCCAGTTGGTGATCGTGCCGAAACATTGGTGGGAGGGGCAGGGGCCGGACGGCAAGCCGCGCGACATCT CAAAGACGACGCTCGAGCCTGTGATGGGATCGGGGCCTTATAAGATCGCATCCTTTTCGTCCGGCGCGACGATCCGTTAT GAACTGCGCGACGATTATTGGGGCAAGGATCTCAATGTGAATGTCGGCCAGAACAATTTCCGCAACGTCATTTACACCTA TTTCGGCGATCGCGATGTCGAGTTCGAAGCCTTTCGCGCCGGCAATAGTGACTTCTGGCAGGAGACAACGGCGTCCCGCT GGGCGACGGGTTATGATTTTCCCGCAGTGAAGGAAGGACGCGTCAAGAAAGAAGAGGTTGCAAATCCGCTGCGCTCCACC GGCATTCTGCAAGCGCTCGTGCCCAATATGCGGCGTGACCTTTTCAAGGATGAACGGGTCCGTGAGGCGCTGAATTACGG CCTCGATTTCGAGGAGCTGAACCGGACCGTTGCCTTCAACAGCTACAAGCGCATCGACAGCTACTTCTGGAACACCGAAC TCGCCTCCTCCGGCCTGCCGCAGGGGCGTGAACTGGAAATACTGCAGGCCATGAAGGACAAGGTGCCGCCTGAGGTCTTC ACGACGCCCTACACCAATCCGGTCGGGGGCGATCCGCAGAAAAGCCGCGACAACCTCCGCAAGGCGATTGCATTGCTCAA AGAATCCGGATGGGAGATCAAGAACAATCGCATGGTCAATGGCAAGACCGGCCAGCCGATGAGTTTCGAGATCCTGTTGT CGAGCCCGGTATTGGAGCGCTGGGCGGTGCCCTATGCCAACAATCTCAAGAAAATCGGCATCGATGCGCGGGTGCGCACA GTCGACGCCTCGCAAGCCGTCAACCGCGAACGCAGCTTCGATTACGACATGATCTGGAATGTCTGGGCGGAGACGATGAA CCCGGGCAACGAGCAAGCAGATTATTGGGGGTCTGGTTCGGTCGACCAGCAGGGCTCCCACAATTATGCGGGCATCGCCA ATCCGGCGGTCGATGAACTCATCCACATGATCATCTTCGCACCCAATCGTGCGGAACAGGTCGCAGCGATCAAGGCAATG GATCGCGTATTGCTGGCAAACCACTACGTCATCCCGCTGTTCTATCGCGATAGCTATAACCTCGCCTATTGGAACACGAT TACGCACCCGACGGACTTCCCGACCTATGGACTGGGTTTCCCGGAAGCCTGGTGGTCCGCCTCGGCAAAATGA
Upstream 100 bases:
>100_bases GCTCAAATTTTCGCGAGTCCGGCAAAAACCAAACTCTCACCTGTTTTTCGCCTGTATTTTTCGTATTGTCGAACCCACCA ATAATGAGGGGAAAGCGTGA
Downstream 100 bases:
>100_bases GCGGGCTTGCAATGCAGGGGCCGTGGGCTCCAAATGGCACGAACGAATCACGATACGCCGGCAGGGCCGGCAAGGGAAGG CTGGCGGATTGAGCGGCATT
Product: family 5 extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MTALWSKIGLFVSLAGVLAPMTGTGQDQPFQIGSSVISEMKYKQGFAHFDYVNPNAPKGGDLRLSASGAFDTFNPILAKG QIAAGLSLVYDTLMKPTDDELLVSYGLLAEGLSYPDDVSSATFRLRKEAKWADGQPITPDDVIFSLDKTKELNAATANYY RHVVKAEKTGDRDVTFTFDEKNNRELPNILGQLVIVPKHWWEGQGPDGKPRDISKTTLEPVMGSGPYKIASFSSGATIRY ELRDDYWGKDLNVNVGQNNFRNVIYTYFGDRDVEFEAFRAGNSDFWQETTASRWATGYDFPAVKEGRVKKEEVANPLRST GILQALVPNMRRDLFKDERVREALNYGLDFEELNRTVAFNSYKRIDSYFWNTELASSGLPQGRELEILQAMKDKVPPEVF TTPYTNPVGGDPQKSRDNLRKAIALLKESGWEIKNNRMVNGKTGQPMSFEILLSSPVLERWAVPYANNLKKIGIDARVRT VDASQAVNRERSFDYDMIWNVWAETMNPGNEQADYWGSGSVDQQGSHNYAGIANPAVDELIHMIIFAPNRAEQVAAIKAM DRVLLANHYVIPLFYRDSYNLAYWNTITHPTDFPTYGLGFPEAWWSASAK
Sequences:
>Translated_610_residues MTALWSKIGLFVSLAGVLAPMTGTGQDQPFQIGSSVISEMKYKQGFAHFDYVNPNAPKGGDLRLSASGAFDTFNPILAKG QIAAGLSLVYDTLMKPTDDELLVSYGLLAEGLSYPDDVSSATFRLRKEAKWADGQPITPDDVIFSLDKTKELNAATANYY RHVVKAEKTGDRDVTFTFDEKNNRELPNILGQLVIVPKHWWEGQGPDGKPRDISKTTLEPVMGSGPYKIASFSSGATIRY ELRDDYWGKDLNVNVGQNNFRNVIYTYFGDRDVEFEAFRAGNSDFWQETTASRWATGYDFPAVKEGRVKKEEVANPLRST GILQALVPNMRRDLFKDERVREALNYGLDFEELNRTVAFNSYKRIDSYFWNTELASSGLPQGRELEILQAMKDKVPPEVF TTPYTNPVGGDPQKSRDNLRKAIALLKESGWEIKNNRMVNGKTGQPMSFEILLSSPVLERWAVPYANNLKKIGIDARVRT VDASQAVNRERSFDYDMIWNVWAETMNPGNEQADYWGSGSVDQQGSHNYAGIANPAVDELIHMIIFAPNRAEQVAAIKAM DRVLLANHYVIPLFYRDSYNLAYWNTITHPTDFPTYGLGFPEAWWSASAK >Mature_609_residues TALWSKIGLFVSLAGVLAPMTGTGQDQPFQIGSSVISEMKYKQGFAHFDYVNPNAPKGGDLRLSASGAFDTFNPILAKGQ IAAGLSLVYDTLMKPTDDELLVSYGLLAEGLSYPDDVSSATFRLRKEAKWADGQPITPDDVIFSLDKTKELNAATANYYR HVVKAEKTGDRDVTFTFDEKNNRELPNILGQLVIVPKHWWEGQGPDGKPRDISKTTLEPVMGSGPYKIASFSSGATIRYE LRDDYWGKDLNVNVGQNNFRNVIYTYFGDRDVEFEAFRAGNSDFWQETTASRWATGYDFPAVKEGRVKKEEVANPLRSTG ILQALVPNMRRDLFKDERVREALNYGLDFEELNRTVAFNSYKRIDSYFWNTELASSGLPQGRELEILQAMKDKVPPEVFT TPYTNPVGGDPQKSRDNLRKAIALLKESGWEIKNNRMVNGKTGQPMSFEILLSSPVLERWAVPYANNLKKIGIDARVRTV DASQAVNRERSFDYDMIWNVWAETMNPGNEQADYWGSGSVDQQGSHNYAGIANPAVDELIHMIIFAPNRAEQVAAIKAMD RVLLANHYVIPLFYRDSYNLAYWNTITHPTDFPTYGLGFPEAWWSASAK
Specific function: Possible binding-protein with either a transport or enzymatic activity [H]
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=574, Percent_Identity=37.1080139372822, Blast_Score=358, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 68538; Mature: 68406
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALWSKIGLFVSLAGVLAPMTGTGQDQPFQIGSSVISEMKYKQGFAHFDYVNPNAPKGG CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC DLRLSASGAFDTFNPILAKGQIAAGLSLVYDTLMKPTDDELLVSYGLLAEGLSYPDDVSS CEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH ATFRLRKEAKWADGQPITPDDVIFSLDKTKELNAATANYYRHVVKAEKTGDRDVTFTFDE HHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECC KNNRELPNILGQLVIVPKHWWEGQGPDGKPRDISKTTLEPVMGSGPYKIASFSSGATIRY CCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEE ELRDDYWGKDLNVNVGQNNFRNVIYTYFGDRDVEFEAFRAGNSDFWQETTASRWATGYDF EECCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEHEEECCCCHHHHHHHHHHCCCCCCC PAVKEGRVKKEEVANPLRSTGILQALVPNMRRDLFKDERVREALNYGLDFEELNRTVAFN CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECC SYKRIDSYFWNTELASSGLPQGRELEILQAMKDKVPPEVFTTPYTNPVGGDPQKSRDNLR HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHH KAIALLKESGWEIKNNRMVNGKTGQPMSFEILLSSPVLERWAVPYANNLKKIGIDARVRT HHHHHHHHCCCEECCCEEECCCCCCCEEEEEEECCCHHHHHCCCHHCCCEEECCCEEEEE VDASQAVNRERSFDYDMIWNVWAETMNPGNEQADYWGSGSVDQQGSHNYAGIANPAVDEL ECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IHMIIFAPNRAEQVAAIKAMDRVLLANHYVIPLFYRDSYNLAYWNTITHPTDFPTYGLGF HHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC PEAWWSASAK CHHHHCCCCC >Mature Secondary Structure TALWSKIGLFVSLAGVLAPMTGTGQDQPFQIGSSVISEMKYKQGFAHFDYVNPNAPKGG CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC DLRLSASGAFDTFNPILAKGQIAAGLSLVYDTLMKPTDDELLVSYGLLAEGLSYPDDVSS CEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCH ATFRLRKEAKWADGQPITPDDVIFSLDKTKELNAATANYYRHVVKAEKTGDRDVTFTFDE HHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECC KNNRELPNILGQLVIVPKHWWEGQGPDGKPRDISKTTLEPVMGSGPYKIASFSSGATIRY CCCCHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEE ELRDDYWGKDLNVNVGQNNFRNVIYTYFGDRDVEFEAFRAGNSDFWQETTASRWATGYDF EECCCCCCCCCEEECCCCCCCEEEEEEECCCCCEEHEEECCCCHHHHHHHHHHCCCCCCC PAVKEGRVKKEEVANPLRSTGILQALVPNMRRDLFKDERVREALNYGLDFEELNRTVAFN CCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEECC SYKRIDSYFWNTELASSGLPQGRELEILQAMKDKVPPEVFTTPYTNPVGGDPQKSRDNLR HHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHH KAIALLKESGWEIKNNRMVNGKTGQPMSFEILLSSPVLERWAVPYANNLKKIGIDARVRT HHHHHHHHCCCEECCCEEECCCCCCCEEEEEEECCCHHHHHCCCHHCCCEEECCCEEEEE VDASQAVNRERSFDYDMIWNVWAETMNPGNEQADYWGSGSVDQQGSHNYAGIANPAVDEL ECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IHMIIFAPNRAEQVAAIKAMDRVLLANHYVIPLFYRDSYNLAYWNTITHPTDFPTYGLGF HHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCCC PEAWWSASAK CHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]