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The map label for this gene is yteT [H]

Identifier: 209551581

GI number: 209551581

Start: 4179393

End: 4180670

Strand: Reverse

Name: yteT [H]

Synonym: Rleg2_4010

Alternate gene names: 209551581

Gene position: 4180670-4179393 (Counterclockwise)

Preceding gene: 209551582

Following gene: 209551577

Centisome position: 92.13

GC content: 60.17

Gene sequence:

>1278_bases
ATGGAGAAACGCCGTTTTGCCCTGATCGGCACGGGAAACCGCGGCACCACCATGTGGGGCAAGGATCTGCTGGCCGGCTG
GCGCGAACATGTCGACCTCACAGCCATCGTCGAGACGAATTCGCTGCGCGGCGAGCGCGCCCGGAACATGATCGGCAGCA
ACGCGCCGCTCTATGAAAACATCGATTCCATGCTCGCCGAGCAGAAACCGGATCTGGTCATCGTCTGCACGCCCGACCAT
ACGCATGACGATATCGTCGTGCGGGCGCTGGAGGCCGGTATCGACGTCATTACCGAAAAGCCGATGACCACCTCGGTCGA
GAAAATTCGCCGGATTCTCGATGCCGAAAAACGCACCGGCCGCCGCGTCGACGTCTCCTTCAACTATCGCTACGCGCCGA
CGGCCGCAAAGATCAAGGAGCTGCTGAACAGCGGCGAGATCGGCCGGGTGACCTCCGTCGATTTTCACTGGTATCTGAAC
ACCAAACATGGCGCCGATTACTTCCGACGCTGGCATGCGTATACGGAAAATTCCGGCAGCCTGTTCGTCCACAAGGCGAC
CCATCATTTCGATCTGTTGAACTGGTATCTCGACAGCGATCCCGACGCCGTCACCGCCTTCGCCGACCTGCAGAACTACG
GCCGCAAGGGGCCGTTCCGCGGACCGCGCTGCAAGCTCTGTCCGCACGCGCATGAATGCGACTACTATCTCGATATCGAA
AAGGATTCCTTTCTCGATCAGCTCTACGAGGATCCGTCGAAGATTGACGGCTATTTCCGCGACGGCTGCGTCTTTCGCGA
GGATATCGATATTCCCGATACGATGGTGGTCAGCCTGCGCTACCGCAACAATGTCCATGTCTCCTATTCGCTGAACACCT
TCCAGCCGATCGAAGGCCATCACCTGGCCTTCAACGGCACCAAGGGACGCATCGAAATTCGCCAATATGAGACCCAGCCG
TGGGAAGAGCCGAAGCAGGACACGATCCTGCTCATCCGCAATTTCCCGAACGGCAAGGAGGCGGTCGAGCGCATCGTCGT
TCCGCATTTCACCGGCGGCCATTACGGCGGCGACGACCGGATGCGCAACATGATCTTCAAGCCCGATATGGAAGACCGGC
TCGCCCAGCGCGCCGGCACGCGGGCCGGCGCCATGTCCGTGCTCTGCGGCATTGCCGCGCTGACGAGCTCGCGCACCGGC
AAGGTGGTCAATATTGCCGATCTGATGCCGGAGCTTGCCGATGACGGGTCGCCGAATTCGCTGAAAACAGCGCGCTGA

Upstream 100 bases:

>100_bases
CGGCCGACGAGGTGATCGCCACCTGCGTCGAGCGCTTCAGAAGCTGCTGCCAGATCTAATTTCAATATTCGTTTCATCAC
GCATGCAGGAGGATCATTCG

Downstream 100 bases:

>100_bases
CGCGGCAGCGTCAGGCGATGTTTTCGAGATCCTGCCGGCGGATCTGGTAGAGCAGCGGCCGGCCGGCCGTAAAACGCTCG
ACCTCATCCGCCGCCATCTC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MEKRRFALIGTGNRGTTMWGKDLLAGWREHVDLTAIVETNSLRGERARNMIGSNAPLYENIDSMLAEQKPDLVIVCTPDH
THDDIVVRALEAGIDVITEKPMTTSVEKIRRILDAEKRTGRRVDVSFNYRYAPTAAKIKELLNSGEIGRVTSVDFHWYLN
TKHGADYFRRWHAYTENSGSLFVHKATHHFDLLNWYLDSDPDAVTAFADLQNYGRKGPFRGPRCKLCPHAHECDYYLDIE
KDSFLDQLYEDPSKIDGYFRDGCVFREDIDIPDTMVVSLRYRNNVHVSYSLNTFQPIEGHHLAFNGTKGRIEIRQYETQP
WEEPKQDTILLIRNFPNGKEAVERIVVPHFTGGHYGGDDRMRNMIFKPDMEDRLAQRAGTRAGAMSVLCGIAALTSSRTG
KVVNIADLMPELADDGSPNSLKTAR

Sequences:

>Translated_425_residues
MEKRRFALIGTGNRGTTMWGKDLLAGWREHVDLTAIVETNSLRGERARNMIGSNAPLYENIDSMLAEQKPDLVIVCTPDH
THDDIVVRALEAGIDVITEKPMTTSVEKIRRILDAEKRTGRRVDVSFNYRYAPTAAKIKELLNSGEIGRVTSVDFHWYLN
TKHGADYFRRWHAYTENSGSLFVHKATHHFDLLNWYLDSDPDAVTAFADLQNYGRKGPFRGPRCKLCPHAHECDYYLDIE
KDSFLDQLYEDPSKIDGYFRDGCVFREDIDIPDTMVVSLRYRNNVHVSYSLNTFQPIEGHHLAFNGTKGRIEIRQYETQP
WEEPKQDTILLIRNFPNGKEAVERIVVPHFTGGHYGGDDRMRNMIFKPDMEDRLAQRAGTRAGAMSVLCGIAALTSSRTG
KVVNIADLMPELADDGSPNSLKTAR
>Mature_425_residues
MEKRRFALIGTGNRGTTMWGKDLLAGWREHVDLTAIVETNSLRGERARNMIGSNAPLYENIDSMLAEQKPDLVIVCTPDH
THDDIVVRALEAGIDVITEKPMTTSVEKIRRILDAEKRTGRRVDVSFNYRYAPTAAKIKELLNSGEIGRVTSVDFHWYLN
TKHGADYFRRWHAYTENSGSLFVHKATHHFDLLNWYLDSDPDAVTAFADLQNYGRKGPFRGPRCKLCPHAHECDYYLDIE
KDSFLDQLYEDPSKIDGYFRDGCVFREDIDIPDTMVVSLRYRNNVHVSYSLNTFQPIEGHHLAFNGTKGRIEIRQYETQP
WEEPKQDTILLIRNFPNGKEAVERIVVPHFTGGHYGGDDRMRNMIFKPDMEDRLAQRAGTRAGAMSVLCGIAALTSSRTG
KVVNIADLMPELADDGSPNSLKTAR

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=146, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 48339; Mature: 48339

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRRFALIGTGNRGTTMWGKDLLAGWREHVDLTAIVETNSLRGERARNMIGSNAPLYEN
CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCHHHH
IDSMLAEQKPDLVIVCTPDHTHDDIVVRALEAGIDVITEKPMTTSVEKIRRILDAEKRTG
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCC
RRVDVSFNYRYAPTAAKIKELLNSGEIGRVTSVDFHWYLNTKHGADYFRRWHAYTENSGS
CEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHEECCCCC
LFVHKATHHFDLLNWYLDSDPDAVTAFADLQNYGRKGPFRGPRCKLCPHAHECDYYLDIE
EEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC
KDSFLDQLYEDPSKIDGYFRDGCVFREDIDIPDTMVVSLRYRNNVHVSYSLNTFQPIEGH
HHHHHHHHHCCHHHHCCCHHCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCC
HLAFNGTKGRIEIRQYETQPWEEPKQDTILLIRNFPNGKEAVERIVVPHFTGGHYGGDDR
EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHH
MRNMIFKPDMEDRLAQRAGTRAGAMSVLCGIAALTSSRTGKVVNIADLMPELADDGSPNS
HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCC
LKTAR
CCCCC
>Mature Secondary Structure
MEKRRFALIGTGNRGTTMWGKDLLAGWREHVDLTAIVETNSLRGERARNMIGSNAPLYEN
CCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCHHHH
IDSMLAEQKPDLVIVCTPDHTHDDIVVRALEAGIDVITEKPMTTSVEKIRRILDAEKRTG
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHCC
RRVDVSFNYRYAPTAAKIKELLNSGEIGRVTSVDFHWYLNTKHGADYFRRWHAYTENSGS
CEEEEEEEEEECCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHEECCCCC
LFVHKATHHFDLLNWYLDSDPDAVTAFADLQNYGRKGPFRGPRCKLCPHAHECDYYLDIE
EEEEECCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC
KDSFLDQLYEDPSKIDGYFRDGCVFREDIDIPDTMVVSLRYRNNVHVSYSLNTFQPIEGH
HHHHHHHHHCCHHHHCCCHHCCEEEEECCCCCCEEEEEEEECCCEEEEEECCCCCCCCCC
HLAFNGTKGRIEIRQYETQPWEEPKQDTILLIRNFPNGKEAVERIVVPHFTGGHYGGDDR
EEEEECCCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHH
MRNMIFKPDMEDRLAQRAGTRAGAMSVLCGIAALTSSRTGKVVNIADLMPELADDGSPNS
HHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCC
LKTAR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]