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The map label for this gene is yesO [H]

Identifier: 209551577

GI number: 209551577

Start: 4174052

End: 4175338

Strand: Reverse

Name: yesO [H]

Synonym: Rleg2_4006

Alternate gene names: 209551577

Gene position: 4175338-4174052 (Counterclockwise)

Preceding gene: 209551581

Following gene: 209551571

Centisome position: 92.01

GC content: 61.85

Gene sequence:

>1287_bases
ATGCAGGTCAACCGCCGTTCATTTCTGATGGGATCAGCCGGAGCAGCCGCCGGCCTCGCCTTTGGCGCGGGAAGCGCCAT
TCCGGCTTTTGCCGAGGACACCTCGCTGCGCGCCATGTGGTGGGGTTCGAACGACCGCGCCAAGCGCACGCTCGATGTCG
CCAAGCTCTATCAATCGAAGACACCCGGCGTCACGATCGTCGGTGAATCGCTATCCGGCGACGGCTACTGGACCAAGCTC
GCAACGCAGATGGCCGGGCGCTCGATCGCCGACATCTTCCAGCTCGAGCCGGGAACGATCTCCGATTATTCCAAGCGCGG
CGCCTGCCTGCCGCTCGACGAATTCGTCCCCTCGACGCTGAAGGTCCAGTCCTTCGGCGCCGACATGCTGAAACTGACCA
CCATCGACGGCAAACTCTATGGTGTCGGCCTCGGCCTCAACTCCTTCTCGATGTTTTTCGACACGGTCGAATTCGAAAAG
GCCGGCATCCCGCTGCCGACACCCGACCTTACCTGGGATGAGTATGCCAAGCTCGCTGTCGAACTCACAAAGTCTTCCGG
CAAGAGCGGAGGCCCCTATGCGGCCCGCTACGCCTATGTGTTCGACGCCTGGCTGCGCCAGCGCGGCAAGAGCCTTTTTG
CAAAGGAAACCGTCGGGCTCGGCTTCACGGCCGACGATGCCACGGAATGGTTCGACTATTGGGAGAAGCTGCGCAAGGCG
GGCGGCACCGTTGCCGCCGATGTGCAGACGCTCGATCAGAACACCATCGACACCAATAGCCTCGGTGTCGGTAAATCGGT
GATGGGCATGGCCTATTCCAACCAGATGGTCGGCTACCAGCTGATCATCAAGAACAAGCTCGGCGTCACCATGCTGCCGC
GGGAAAAGAAGGGCGGACCCTCCGGCCACTACTACCGTCCTGCGCTGATCTGGAGTCTCGGCGCCACGACGAAGAACGGT
GAAGCGGCCGCGAAATTCATCGACTTCTTCGTCAACGATATCGAGGCCGGCAAGATCCTCGGCGTCGAGCGCGGCGTGCC
GATGTCGCCGACCGTGCGTGAAGCCATTCTGCCGCAACTCAACCCGACGGAGCAGGAAACGGTCAAATACGTCAATCTTC
TGAAAGATCAGGTCGGCGAATATCCGCCGCCGGTGCCGATGGGCGCAACCCAGTTCGACCAGCGCGTGCTGCGCCCGATC
TGCGACGAACTCGCTTTCGAACGGATTTCGCCGGCCGATGCGGCGACCCGGCTCGTCGAAGAGGGGAAGGCGACGCTCAA
AGGATGA

Upstream 100 bases:

>100_bases
TATTTCTTGCAATAATTATTTTTTTGCGTACTCTTTGTGCCGAATTGCTCGCAACGCCATTGGAGGATGGCAGCGGGCAT
ATTGGGGCAAGGAGGATATC

Downstream 100 bases:

>100_bases
TCGATCGCCTGAAGCATGTCGCGCAAAAGTGTGCAGCGGTTTTCCCAGGCAAAGCGCGAGCGCTTTTGCCGCAAACGACA
TGCGTAAGAACAAAGAGCTA

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MQVNRRSFLMGSAGAAAGLAFGAGSAIPAFAEDTSLRAMWWGSNDRAKRTLDVAKLYQSKTPGVTIVGESLSGDGYWTKL
ATQMAGRSIADIFQLEPGTISDYSKRGACLPLDEFVPSTLKVQSFGADMLKLTTIDGKLYGVGLGLNSFSMFFDTVEFEK
AGIPLPTPDLTWDEYAKLAVELTKSSGKSGGPYAARYAYVFDAWLRQRGKSLFAKETVGLGFTADDATEWFDYWEKLRKA
GGTVAADVQTLDQNTIDTNSLGVGKSVMGMAYSNQMVGYQLIIKNKLGVTMLPREKKGGPSGHYYRPALIWSLGATTKNG
EAAAKFIDFFVNDIEAGKILGVERGVPMSPTVREAILPQLNPTEQETVKYVNLLKDQVGEYPPPVPMGATQFDQRVLRPI
CDELAFERISPADAATRLVEEGKATLKG

Sequences:

>Translated_428_residues
MQVNRRSFLMGSAGAAAGLAFGAGSAIPAFAEDTSLRAMWWGSNDRAKRTLDVAKLYQSKTPGVTIVGESLSGDGYWTKL
ATQMAGRSIADIFQLEPGTISDYSKRGACLPLDEFVPSTLKVQSFGADMLKLTTIDGKLYGVGLGLNSFSMFFDTVEFEK
AGIPLPTPDLTWDEYAKLAVELTKSSGKSGGPYAARYAYVFDAWLRQRGKSLFAKETVGLGFTADDATEWFDYWEKLRKA
GGTVAADVQTLDQNTIDTNSLGVGKSVMGMAYSNQMVGYQLIIKNKLGVTMLPREKKGGPSGHYYRPALIWSLGATTKNG
EAAAKFIDFFVNDIEAGKILGVERGVPMSPTVREAILPQLNPTEQETVKYVNLLKDQVGEYPPPVPMGATQFDQRVLRPI
CDELAFERISPADAATRLVEEGKATLKG
>Mature_428_residues
MQVNRRSFLMGSAGAAAGLAFGAGSAIPAFAEDTSLRAMWWGSNDRAKRTLDVAKLYQSKTPGVTIVGESLSGDGYWTKL
ATQMAGRSIADIFQLEPGTISDYSKRGACLPLDEFVPSTLKVQSFGADMLKLTTIDGKLYGVGLGLNSFSMFFDTVEFEK
AGIPLPTPDLTWDEYAKLAVELTKSSGKSGGPYAARYAYVFDAWLRQRGKSLFAKETVGLGFTADDATEWFDYWEKLRKA
GGTVAADVQTLDQNTIDTNSLGVGKSVMGMAYSNQMVGYQLIIKNKLGVTMLPREKKGGPSGHYYRPALIWSLGATTKNG
EAAAKFIDFFVNDIEAGKILGVERGVPMSPTVREAILPQLNPTEQETVKYVNLLKDQVGEYPPPVPMGATQFDQRVLRPI
CDELAFERISPADAATRLVEEGKATLKG

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46448; Mature: 46448

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNRRSFLMGSAGAAAGLAFGAGSAIPAFAEDTSLRAMWWGSNDRAKRTLDVAKLYQSK
CCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
TPGVTIVGESLSGDGYWTKLATQMAGRSIADIFQLEPGTISDYSKRGACLPLDEFVPSTL
CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCCCE
KVQSFGADMLKLTTIDGKLYGVGLGLNSFSMFFDTVEFEKAGIPLPTPDLTWDEYAKLAV
EEHHCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ELTKSSGKSGGPYAARYAYVFDAWLRQRGKSLFAKETVGLGFTADDATEWFDYWEKLRKA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GGTVAADVQTLDQNTIDTNSLGVGKSVMGMAYSNQMVGYQLIIKNKLGVTMLPREKKGGP
CCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCC
SGHYYRPALIWSLGATTKNGEAAAKFIDFFVNDIEAGKILGVERGVPMSPTVREAILPQL
CCCEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCC
NPTEQETVKYVNLLKDQVGEYPPPVPMGATQFDQRVLRPICDELAFERISPADAATRLVE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EGKATLKG
HCHHHCCC
>Mature Secondary Structure
MQVNRRSFLMGSAGAAAGLAFGAGSAIPAFAEDTSLRAMWWGSNDRAKRTLDVAKLYQSK
CCCCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCC
TPGVTIVGESLSGDGYWTKLATQMAGRSIADIFQLEPGTISDYSKRGACLPLDEFVPSTL
CCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHCCCCCCHHHHCCCCE
KVQSFGADMLKLTTIDGKLYGVGLGLNSFSMFFDTVEFEKAGIPLPTPDLTWDEYAKLAV
EEHHCCCCEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ELTKSSGKSGGPYAARYAYVFDAWLRQRGKSLFAKETVGLGFTADDATEWFDYWEKLRKA
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
GGTVAADVQTLDQNTIDTNSLGVGKSVMGMAYSNQMVGYQLIIKNKLGVTMLPREKKGGP
CCCEEEHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCC
SGHYYRPALIWSLGATTKNGEAAAKFIDFFVNDIEAGKILGVERGVPMSPTVREAILPQL
CCCEECCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCC
NPTEQETVKYVNLLKDQVGEYPPPVPMGATQFDQRVLRPICDELAFERISPADAATRLVE
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
EGKATLKG
HCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]