| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is phoA [H]
Identifier: 209551477
GI number: 209551477
Start: 4047159
End: 4048913
Strand: Reverse
Name: phoA [H]
Synonym: Rleg2_3906
Alternate gene names: 209551477
Gene position: 4048913-4047159 (Counterclockwise)
Preceding gene: 209551481
Following gene: 209551476
Centisome position: 89.22
GC content: 61.2
Gene sequence:
>1755_bases ATGCGTACGCTTCTTGCCGCTTTTGCGGCCACCACCATCCTTGCGGGCGCCGCTCAGGCGACGACGGTCTATCCGCTCGA TCGCGCGACGATCCTTGCCGGTTCGCCGTTCGATTTCAAGGTCGAACTCAACAAGCAGGTCAAGCCCGAAGACGTGAAGA TCACGGTCAACGGCCAGGATTACAAGACCGTCCTCGGCGGCGAGGCGCAGTTCGTCGAGCTGGAAAAGGGCAAAGAGGAC AAGGCCCTCGGCTCCGCGCTTCTGCTGCGCGGCCTGAAGATCTCCGCTCCGGGCGCCTATAAGGTCGAGGTCGCCGCCGG CGACGAAACGAAGTCCGTCACCTGGAACGTTTACGAAACCGCTGGCCAGCCGAAAGCCAAGAACATCATCTTCCTGCTCG GTGACGGTCTTTCCGTTGCCCATCGCACCGCTGCCCGCATCATGTCGAAGGGCATGACCGAAGGCAAGGCGAACGGTCGC CTGAACATGGACGATCTCGATCGCATGGCTTTCATCGGCACCTCGTCGACGAACGCCGTCTCCACGGACTCGGCCAACAC CATGTCGGCCTACATGACGGGCCACAAGACCGCCGTCAACGCGCTCGGCGTCTACGCGGACCGCACCCCGGCCTCGCTCG ATGACCCGCGCGTCGAAACCTTCGCGGAAGCCGTTCGCCGGACGACCAAGAAGTCGATCGGTATCGTCGCAACCGCCGAA GTCGAAGACGCGACGCCGGCTGCCGTCGTTTCCCATACCCGCAACCGCAACGACAAGGCCGATGTCGTCGGCATGCTGCT CGACGTCAAGCCGGAAGTCCTGCTCGGCGGCGGGTCGGCCTATTTCCTCGGCAAAGAGGTCCCCGGCTCCAAGCGCAAGG ACAACCAGGACTACATTAAGCTGTTCCAGGATGCCGGCTATAAGCTTGCGACCGACAAGAACGAGCTCGCCGCCAATGCG TCGGCTGAAGGCAATCTCCTCGGTCTGTTCCACACCGGCAATATGGACGTCACGCTCGATCGCGAGTTCCTGAAGAAGGG TACCGTCGACAAGTTCCCGAACCAGCCGGGTCTCGTCGCCATGACCAAGGTCGCGCTCGACCGTCTCTCCAAGAATCCGG ACGGTTTCTTCCTGATGGTCGAAGGTTCCTCGATCGACAAGATGTCCCATCCGCTCGATTGGGATCGCGCCGTCTTCGAA ACCATCGAATTCGACCAGGCGATCGGCGTTGCCCGCGAATTCCAGAAGGCCCATCCGGACACGCTGATCGTCGTTACCGG CGACCACACCCACGGTGTATCGATCATCGGCACCGTCGATGACGAGAAGCCCGGCACGGAAATGCGCGAAAAGGTCGGCA CCTATGCGGAAGCCGGCTTCCCAAACTACAAGGACGAAAATGGCGACGGTTATCCTGACAAGGTCGACGTCAGCCGCCGC CTGTTCCTGAGCGCCACCAACGGTCCCGACCACTACGAGACCTTCCGTCCGAAGCTCGATGGTCCATTCGTTCCGGCTGT CCAGAACGAAAAGAAGGAATATGTCGCCAACGAACAGTACAAGGATGTTCCCGGCGCGGTCTTCGTTCAGGGCAATCTTC CGAAGAGCAGCGAAAGCGGCGTCCATGCGGTCGACGACGTCGTCCTGCAGTCGGCTGGTCCTGGTTCGGAAGAGTTCCAT GGCTACATGGAACAGAGCGACGTCTATCGCGTGCTCGCCGACACCTTCGCTCTCGGCGCCAAGCAGACGAACTGA
Upstream 100 bases:
>100_bases GCGGCGGCCGCGATGCTGCGACGTTTTGTCATGCCGCTGTCATCCTCGGCAGGTATCCCGGCCGGGTTCTCAATGTCTGC AACGAAAACGGGGGTTTTCC
Downstream 100 bases:
>100_bases TCCGAAGCCGATCCGGCAGGCCGCTTGCCGGCCTTGCCTGTTTCATCGATCATGGTCCCGGCCGTTCAGCGGCCGGGATT TCATTCTTGGAGATCGCCAT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MRTLLAAFAATTILAGAAQATTVYPLDRATILAGSPFDFKVELNKQVKPEDVKITVNGQDYKTVLGGEAQFVELEKGKED KALGSALLLRGLKISAPGAYKVEVAAGDETKSVTWNVYETAGQPKAKNIIFLLGDGLSVAHRTAARIMSKGMTEGKANGR LNMDDLDRMAFIGTSSTNAVSTDSANTMSAYMTGHKTAVNALGVYADRTPASLDDPRVETFAEAVRRTTKKSIGIVATAE VEDATPAAVVSHTRNRNDKADVVGMLLDVKPEVLLGGGSAYFLGKEVPGSKRKDNQDYIKLFQDAGYKLATDKNELAANA SAEGNLLGLFHTGNMDVTLDREFLKKGTVDKFPNQPGLVAMTKVALDRLSKNPDGFFLMVEGSSIDKMSHPLDWDRAVFE TIEFDQAIGVAREFQKAHPDTLIVVTGDHTHGVSIIGTVDDEKPGTEMREKVGTYAEAGFPNYKDENGDGYPDKVDVSRR LFLSATNGPDHYETFRPKLDGPFVPAVQNEKKEYVANEQYKDVPGAVFVQGNLPKSSESGVHAVDDVVLQSAGPGSEEFH GYMEQSDVYRVLADTFALGAKQTN
Sequences:
>Translated_584_residues MRTLLAAFAATTILAGAAQATTVYPLDRATILAGSPFDFKVELNKQVKPEDVKITVNGQDYKTVLGGEAQFVELEKGKED KALGSALLLRGLKISAPGAYKVEVAAGDETKSVTWNVYETAGQPKAKNIIFLLGDGLSVAHRTAARIMSKGMTEGKANGR LNMDDLDRMAFIGTSSTNAVSTDSANTMSAYMTGHKTAVNALGVYADRTPASLDDPRVETFAEAVRRTTKKSIGIVATAE VEDATPAAVVSHTRNRNDKADVVGMLLDVKPEVLLGGGSAYFLGKEVPGSKRKDNQDYIKLFQDAGYKLATDKNELAANA SAEGNLLGLFHTGNMDVTLDREFLKKGTVDKFPNQPGLVAMTKVALDRLSKNPDGFFLMVEGSSIDKMSHPLDWDRAVFE TIEFDQAIGVAREFQKAHPDTLIVVTGDHTHGVSIIGTVDDEKPGTEMREKVGTYAEAGFPNYKDENGDGYPDKVDVSRR LFLSATNGPDHYETFRPKLDGPFVPAVQNEKKEYVANEQYKDVPGAVFVQGNLPKSSESGVHAVDDVVLQSAGPGSEEFH GYMEQSDVYRVLADTFALGAKQTN >Mature_584_residues MRTLLAAFAATTILAGAAQATTVYPLDRATILAGSPFDFKVELNKQVKPEDVKITVNGQDYKTVLGGEAQFVELEKGKED KALGSALLLRGLKISAPGAYKVEVAAGDETKSVTWNVYETAGQPKAKNIIFLLGDGLSVAHRTAARIMSKGMTEGKANGR LNMDDLDRMAFIGTSSTNAVSTDSANTMSAYMTGHKTAVNALGVYADRTPASLDDPRVETFAEAVRRTTKKSIGIVATAE VEDATPAAVVSHTRNRNDKADVVGMLLDVKPEVLLGGGSAYFLGKEVPGSKRKDNQDYIKLFQDAGYKLATDKNELAANA SAEGNLLGLFHTGNMDVTLDREFLKKGTVDKFPNQPGLVAMTKVALDRLSKNPDGFFLMVEGSSIDKMSHPLDWDRAVFE TIEFDQAIGVAREFQKAHPDTLIVVTGDHTHGVSIIGTVDDEKPGTEMREKVGTYAEAGFPNYKDENGDGYPDKVDVSRR LFLSATNGPDHYETFRPKLDGPFVPAVQNEKKEYVANEQYKDVPGAVFVQGNLPKSSESGVHAVDDVVLQSAGPGSEEFH GYMEQSDVYRVLADTFALGAKQTN
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI157266296, Length=495, Percent_Identity=29.0909090909091, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI94721246, Length=495, Percent_Identity=28.8888888888889, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI157266292, Length=498, Percent_Identity=28.3132530120482, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI116734717, Length=494, Percent_Identity=28.1376518218623, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI294660770, Length=489, Percent_Identity=27.6073619631902, Blast_Score=123, Evalue=4e-28, Organism=Homo sapiens, GI294660772, Length=445, Percent_Identity=26.9662921348315, Blast_Score=104, Evalue=3e-22, Organism=Escherichia coli, GI48994877, Length=396, Percent_Identity=33.3333333333333, Blast_Score=145, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6320689, Length=334, Percent_Identity=29.3413173652695, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI21358067, Length=495, Percent_Identity=30.5050505050505, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI24657835, Length=501, Percent_Identity=29.940119760479, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI24657842, Length=502, Percent_Identity=30.8764940239044, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI19921912, Length=499, Percent_Identity=28.8577154308617, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI21355149, Length=490, Percent_Identity=28.1632653061224, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24657827, Length=503, Percent_Identity=29.0258449304175, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355981, Length=493, Percent_Identity=28.8032454361055, Blast_Score=127, Evalue=3e-29, Organism=Drosophila melanogaster, GI18859923, Length=475, Percent_Identity=26.7368421052632, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI21355151, Length=487, Percent_Identity=28.3367556468172, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI24651554, Length=517, Percent_Identity=26.6924564796905, Blast_Score=120, Evalue=3e-27, Organism=Drosophila melanogaster, GI85725200, Length=350, Percent_Identity=30, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI85815833, Length=350, Percent_Identity=30, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI24651556, Length=470, Percent_Identity=25.7446808510638, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI24585213, Length=499, Percent_Identity=25.4509018036072, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 63006; Mature: 63006
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLLAAFAATTILAGAAQATTVYPLDRATILAGSPFDFKVELNKQVKPEDVKITVNGQD CHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCC YKTVLGGEAQFVELEKGKEDKALGSALLLRGLKISAPGAYKVEVAAGDETKSVTWNVYET EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEEEEEC AGQPKAKNIIFLLGDGLSVAHRTAARIMSKGMTEGKANGRLNMDDLDRMAFIGTSSTNAV CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCCCE STDSANTMSAYMTGHKTAVNALGVYADRTPASLDDPRVETFAEAVRRTTKKSIGIVATAE ECCCCCCEEEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEC VEDATPAAVVSHTRNRNDKADVVGMLLDVKPEVLLGGGSAYFLGKEVPGSKRKDNQDYIK CCCCCCHHHHHHHCCCCCHHHHHHHEECCCCCEEEECCCEEEEECCCCCCCCCCCHHHHH LFQDAGYKLATDKNELAANASAEGNLLGLFHTGNMDVTLDREFLKKGTVDKFPNQPGLVA HHHHCCCEEECCCHHHCCCCCCCCCEEEEEEECCEEEEECHHHHHCCCHHCCCCCCCHHH MTKVALDRLSKNPDGFFLMVEGSSIDKMSHPLDWDRAVFETIEFDQAIGVAREFQKAHPD HHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIVVTGDHTHGVSIIGTVDDEKPGTEMREKVGTYAEAGFPNYKDENGDGYPDKVDVSRR EEEEEECCCCCCEEEEEECCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEE LFLSATNGPDHYETFRPKLDGPFVPAVQNEKKEYVANEQYKDVPGAVFVQGNLPKSSESG EEEEECCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCC VHAVDDVVLQSAGPGSEEFHGYMEQSDVYRVLADTFALGAKQTN CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRTLLAAFAATTILAGAAQATTVYPLDRATILAGSPFDFKVELNKQVKPEDVKITVNGQD CHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCEEEEEECCCCCCCEEEEEECCCC YKTVLGGEAQFVELEKGKEDKALGSALLLRGLKISAPGAYKVEVAAGDETKSVTWNVYET EEEEECCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCEEEEEEEEC AGQPKAKNIIFLLGDGLSVAHRTAARIMSKGMTEGKANGRLNMDDLDRMAFIGTSSTNAV CCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCEEEEECCCCCCE STDSANTMSAYMTGHKTAVNALGVYADRTPASLDDPRVETFAEAVRRTTKKSIGIVATAE ECCCCCCEEEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEC VEDATPAAVVSHTRNRNDKADVVGMLLDVKPEVLLGGGSAYFLGKEVPGSKRKDNQDYIK CCCCCCHHHHHHHCCCCCHHHHHHHEECCCCCEEEECCCEEEEECCCCCCCCCCCHHHHH LFQDAGYKLATDKNELAANASAEGNLLGLFHTGNMDVTLDREFLKKGTVDKFPNQPGLVA HHHHCCCEEECCCHHHCCCCCCCCCEEEEEEECCEEEEECHHHHHCCCHHCCCCCCCHHH MTKVALDRLSKNPDGFFLMVEGSSIDKMSHPLDWDRAVFETIEFDQAIGVAREFQKAHPD HHHHHHHHHCCCCCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIVVTGDHTHGVSIIGTVDDEKPGTEMREKVGTYAEAGFPNYKDENGDGYPDKVDVSRR EEEEEECCCCCCEEEEEECCCCCCCHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEE LFLSATNGPDHYETFRPKLDGPFVPAVQNEKKEYVANEQYKDVPGAVFVQGNLPKSSESG EEEEECCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCC VHAVDDVVLQSAGPGSEEFHGYMEQSDVYRVLADTFALGAKQTN CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]