Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is yibQ [C]

Identifier: 209551457

GI number: 209551457

Start: 4027175

End: 4028368

Strand: Direct

Name: yibQ [C]

Synonym: Rleg2_3886

Alternate gene names: 209551457

Gene position: 4027175-4028368 (Clockwise)

Preceding gene: 209551456

Following gene: 209551458

Centisome position: 88.74

GC content: 65.41

Gene sequence:

>1194_bases
TTGGGAACGGACCTGCATGCGCCTTTGGGCCGCAACCGCAAAGCCGGCAGCCGGCGCCCGGGTGTTCTGCGCCTCGGCCG
CATCGCCGCCAGTCTTTGTCTTTTCGCGATAGGCGGCTTTTCCCTCTATACGGCGTTTCGCGGCGATGGGCTCGAACGCA
CCAAACCACCGGCCGAACAGGCCGCAACGCCACCTTCCAATACCCCTCAGCCACCGACGACCACCGCCAACCAGGCAGCG
GACGGCATGCCGCGCGCCGAACCGCGCTCGGGCGCCAATGTCGAACAGATGGTCACCGGTGATGGCTCCGTCGTCACCAA
ATACAGTCCCCGCCCGCGCGATGGCAGCGGGCCGGTGCTGGTCGACGCCATGCAGATCGGCCAGGATCCGCGCATGGCGG
CCCAGCCGAATGAAGCGCTGCTCGAAGACACCCCTTTCGGCAGGCTGCCGATCGTCGGCCCCGATGGCCGGCGCCCGATG
GATCAATATGCCCGTCCCTCCTCCGGCGCACGCGGCGTCCGCATCGCCATCGTCGTCAGCGGTCTCGGGCTCAGCCAGAC
CGGGACGCAGCGCGCCATCGCTGAATTGCCTGAAGAAATTACCTTCGCCTTTGCCGCGAGCGGCAACAGCCTGCAGCGCT
GGATGCAGGAAGCCCGCCGCGGCGGCCACGAGATTCTTCTGCAGGTGCCGCTCGAGCCTTTTGATTACCCGGCGAATGAT
CCCGGCCCGGAGACGCTGCTGACCACAAAACCCGTGGCCCGCAATATCGAGAACCTGCACAAGGCGATGGGCGAGATCAC
CAATTACACCGGCGTCATGAATTATCTCGGCGGCCGTTTCCTGTCCGATTCCACCGCCATGGAACCTGTCATGCGCGATA
TCGGCAAGCGCGGCCTGCTGTTCCTCGACGACGGCACGTCGGCGCAGTCGAAGACAGCTGATGTCGCCAAGGGAACCGAA
CTGCCCTATGCCTTCGCCGACCTGCAGCTCGACGGCCAACTCGATATCAACGCCGTCCTGAAGAAGCTTGACGAGCTCGA
GCGCATCGCCCGCAAGAACGGCCAGGCGATCGGCGTCGCCTCGGCTTTCGATGAGAGCGTCGACGCCATCGCCAAATGGA
GCGAGGAGGCCGCGATGCGCGGCATCGAGATCGTCGGCGTCGCCGCCCTTTCCAACGACCCACGGAACCCTTGA

Upstream 100 bases:

>100_bases
CGACAAGGCCGTCGTCGCCAAGTAATAATCCCCTCAAGGCCGGGCACCTCGCCCGGCCTTGACCCTTCTGCTGTTTCCCG
GTTTTGGAGCGGGTGAAAAA

Downstream 100 bases:

>100_bases
GAGCAGTCTCTTGAGGAGATCCCTGAACGGAGAAGAAGATGAGCCAGGCGACCGTAAAAGCCGAGGACCTGCCCTACCGC
CCCTGCGTCGGCGTGATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MGTDLHAPLGRNRKAGSRRPGVLRLGRIAASLCLFAIGGFSLYTAFRGDGLERTKPPAEQAATPPSNTPQPPTTTANQAA
DGMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPM
DQYARPSSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND
PGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTAMEPVMRDIGKRGLLFLDDGTSAQSKTADVAKGTE
LPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPRNP

Sequences:

>Translated_397_residues
MGTDLHAPLGRNRKAGSRRPGVLRLGRIAASLCLFAIGGFSLYTAFRGDGLERTKPPAEQAATPPSNTPQPPTTTANQAA
DGMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPM
DQYARPSSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND
PGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTAMEPVMRDIGKRGLLFLDDGTSAQSKTADVAKGTE
LPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPRNP
>Mature_396_residues
GTDLHAPLGRNRKAGSRRPGVLRLGRIAASLCLFAIGGFSLYTAFRGDGLERTKPPAEQAATPPSNTPQPPTTTANQAAD
GMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVLVDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPMD
QYARPSSGARGVRIAIVVSGLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPANDP
GPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTAMEPVMRDIGKRGLLFLDDGTSAQSKTADVAKGTEL
PYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVASAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPRNP

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42350; Mature: 42219

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTDLHAPLGRNRKAGSRRPGVLRLGRIAASLCLFAIGGFSLYTAFRGDGLERTKPPAEQ
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHH
AATPPSNTPQPPTTTANQAADGMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVL
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEECCCCCEEEECCCCCCCCCCCEE
VDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPMDQYARPSSGARGVRIAIVVS
EEHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEEEEE
GLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND
CCCCCCCCHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTAMEPVMRDIGKRGLL
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCCCCEE
FLDDGTSAQSKTADVAKGTELPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVA
EEECCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEH
SAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPRNP
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCC
>Mature Secondary Structure 
GTDLHAPLGRNRKAGSRRPGVLRLGRIAASLCLFAIGGFSLYTAFRGDGLERTKPPAEQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHH
AATPPSNTPQPPTTTANQAADGMPRAEPRSGANVEQMVTGDGSVVTKYSPRPRDGSGPVL
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHEECCCCCEEEECCCCCCCCCCCEE
VDAMQIGQDPRMAAQPNEALLEDTPFGRLPIVGPDGRRPMDQYARPSSGARGVRIAIVVS
EEHHHCCCCCCCCCCCCHHHHCCCCCCCCEEECCCCCCCHHHHCCCCCCCCCEEEEEEEE
GLGLSQTGTQRAIAELPEEITFAFAASGNSLQRWMQEARRGGHEILLQVPLEPFDYPAND
CCCCCCCCHHHHHHHCCHHHEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
PGPETLLTTKPVARNIENLHKAMGEITNYTGVMNYLGGRFLSDSTAMEPVMRDIGKRGLL
CCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHCCCCEE
FLDDGTSAQSKTADVAKGTELPYAFADLQLDGQLDINAVLKKLDELERIARKNGQAIGVA
EEECCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEH
SAFDESVDAIAKWSEEAAMRGIEIVGVAALSNDPRNP
HHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA