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The map label for this gene is ctpA [H]

Identifier: 209551456

GI number: 209551456

Start: 4025777

End: 4027099

Strand: Direct

Name: ctpA [H]

Synonym: Rleg2_3885

Alternate gene names: 209551456

Gene position: 4025777-4027099 (Clockwise)

Preceding gene: 209551455

Following gene: 209551457

Centisome position: 88.71

GC content: 63.42

Gene sequence:

>1323_bases
ATGATTCGTAGGGCTTCTCTTGTTCTGGTCGGCGCATTGATGGGTGCGACCGCCATGAGCGTCATTTACTCGGCGGGTGT
GCCGGCAGAAGCGGCCGGATCGTCCACGTACAAGGAACTCTCGGTGTTCGGCGATGTCTTCGAGCGTGTGCGCGCCCAGT
ACGTGACGCCGCCGGCCGAGGACAAGCTGATTGAGAACGCCATCAACGGCATGCTCTCCTCGCTGGATCCGCATTCGAGC
TATATGAATGCGAAGGACGCCGAGGACATGCGCACCCAGACCAAGGGTGAGTTCGGCGGCCTCGGCATCGAAGTCACGAT
GGAAGACGAACTCGTCAAGGTCATCACCCCGATCGACGATACGCCCGCCGCCAAGGCCGGTGTTCTCGCCGGCGATTATA
TCTCCGAGATCGACGGCCAGTCCGTGCGCGGCCTGAAGCTTGAGGACGCCGTCGAGAAGATGCGCGGCGCCGTCAACACC
CCGATCAAGCTGACGCTGATCCGCAAGGGCGCCGACAAGCCGATCGAGCTGACGATCGTCCGTGACGTCGTCGCCGTCCA
GGCCGTCAAGTCGCGTGTCGAGGACGATGTCGGTTATCTCCGCATCATCTCCTTCACCGAGAAGACCTATCCCGACATGG
AAAAGGCGATCAAGAAGATCAAGGACACCGTTCCGGCCGACAAGCTGAAGGGTTATGTCCTCGACCTGCGCCTCAATCCG
GGCGGCCTGCTCGACCAGGCGATCAACGTCTCCGACGCCCTCTTGCAGCGCGGCGAAGTCGTCTCGACCCGCGGCCGCAA
TCCCGATGAAACCCGCCGCTTCAATGCCGGTCCGGGCGACCTGACGGATGGCAAGCCGGTTATCGTGCTGATCAACGGCG
GTTCGGCTTCCGCATCGGAAATCGTCGCCGGCGCCCTTCAGGATCTGCGCCGCGCCACCGTTCTCGGCACGCGCTCCTTC
GGCAAAGGCTCCGTCCAGACGATCATCCCGCTCGGCGAAAACGGCGCGCTGCGCCTGACCACGGCGCTCTACTACACGCC
GTCGGGCCGCTCGATCCAGGGCACCGGCATTACTCCCGACATCAAGGTCGAGGAGCCGCTGCCGGAGGAACTGCAGGGCA
AGATGGTCACCGAAGGCGAATCCAGCCTGCGCGGCCATATCAAGGGCCAGAGCGAGACGGACGAAGGTTCGGGCTCCGTT
GCCTATGTGCCCCCGGATCCGAAGGACGACGTTCAGCTGAACTACGCGCTCGATCTGCTGCGCGGCAAGAAGACCGATCC
GGCCTTCCCGCCGAACCCCGACAAGGCCGTCGTCGCCAAGTAA

Upstream 100 bases:

>100_bases
GAAACGGACCGGCCAACGCTTTACATTGAATTTCGAAAGGACGGTAAACCGGTCGATTCCCGACCGTGGTGGACCGCCAA
AGACACTGGAAAGGCACGCA

Downstream 100 bases:

>100_bases
TAATCCCCTCAAGGCCGGGCACCTCGCCCGGCCTTGACCCTTCTGCTGTTTCCCGGTTTTGGAGCGGGTGAAAAATTGGG
AACGGACCTGCATGCGCCTT

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIRRASLVLVGALMGATAMSVIYSAGVPAEAAGSSTYKELSVFGDVFERVRAQYVTPPAEDKLIENAINGMLSSLDPHSS
YMNAKDAEDMRTQTKGEFGGLGIEVTMEDELVKVITPIDDTPAAKAGVLAGDYISEIDGQSVRGLKLEDAVEKMRGAVNT
PIKLTLIRKGADKPIELTIVRDVVAVQAVKSRVEDDVGYLRIISFTEKTYPDMEKAIKKIKDTVPADKLKGYVLDLRLNP
GGLLDQAINVSDALLQRGEVVSTRGRNPDETRRFNAGPGDLTDGKPVIVLINGGSASASEIVAGALQDLRRATVLGTRSF
GKGSVQTIIPLGENGALRLTTALYYTPSGRSIQGTGITPDIKVEEPLPEELQGKMVTEGESSLRGHIKGQSETDEGSGSV
AYVPPDPKDDVQLNYALDLLRGKKTDPAFPPNPDKAVVAK

Sequences:

>Translated_440_residues
MIRRASLVLVGALMGATAMSVIYSAGVPAEAAGSSTYKELSVFGDVFERVRAQYVTPPAEDKLIENAINGMLSSLDPHSS
YMNAKDAEDMRTQTKGEFGGLGIEVTMEDELVKVITPIDDTPAAKAGVLAGDYISEIDGQSVRGLKLEDAVEKMRGAVNT
PIKLTLIRKGADKPIELTIVRDVVAVQAVKSRVEDDVGYLRIISFTEKTYPDMEKAIKKIKDTVPADKLKGYVLDLRLNP
GGLLDQAINVSDALLQRGEVVSTRGRNPDETRRFNAGPGDLTDGKPVIVLINGGSASASEIVAGALQDLRRATVLGTRSF
GKGSVQTIIPLGENGALRLTTALYYTPSGRSIQGTGITPDIKVEEPLPEELQGKMVTEGESSLRGHIKGQSETDEGSGSV
AYVPPDPKDDVQLNYALDLLRGKKTDPAFPPNPDKAVVAK
>Mature_440_residues
MIRRASLVLVGALMGATAMSVIYSAGVPAEAAGSSTYKELSVFGDVFERVRAQYVTPPAEDKLIENAINGMLSSLDPHSS
YMNAKDAEDMRTQTKGEFGGLGIEVTMEDELVKVITPIDDTPAAKAGVLAGDYISEIDGQSVRGLKLEDAVEKMRGAVNT
PIKLTLIRKGADKPIELTIVRDVVAVQAVKSRVEDDVGYLRIISFTEKTYPDMEKAIKKIKDTVPADKLKGYVLDLRLNP
GGLLDQAINVSDALLQRGEVVSTRGRNPDETRRFNAGPGDLTDGKPVIVLINGGSASASEIVAGALQDLRRATVLGTRSF
GKGSVQTIIPLGENGALRLTTALYYTPSGRSIQGTGITPDIKVEEPLPEELQGKMVTEGESSLRGHIKGQSETDEGSGSV
AYVPPDPKDDVQLNYALDLLRGKKTDPAFPPNPDKAVVAK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=321, Percent_Identity=28.3489096573209, Blast_Score=112, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46975; Mature: 46975

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRASLVLVGALMGATAMSVIYSAGVPAEAAGSSTYKELSVFGDVFERVRAQYVTPPAE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DKLIENAINGMLSSLDPHSSYMNAKDAEDMRTQTKGEFGGLGIEVTMEDELVKVITPIDD
HHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCC
TPAAKAGVLAGDYISEIDGQSVRGLKLEDAVEKMRGAVNTPIKLTLIRKGADKPIELTIV
CCCCHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEH
RDVVAVQAVKSRVEDDVGYLRIISFTEKTYPDMEKAIKKIKDTVPADKLKGYVLDLRLNP
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCEEEEEEECC
GGLLDQAINVSDALLQRGEVVSTRGRNPDETRRFNAGPGDLTDGKPVIVLINGGSASASE
CCHHHHHCCHHHHHHHCCCEEECCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCHHH
IVAGALQDLRRATVLGTRSFGKGSVQTIIPLGENGALRLTTALYYTPSGRSIQGTGITPD
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCC
IKVEEPLPEELQGKMVTEGESSLRGHIKGQSETDEGSGSVAYVPPDPKDDVQLNYALDLL
CEECCCCCHHHCCCEEECCCHHHHEEECCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHH
RGKKTDPAFPPNPDKAVVAK
HCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MIRRASLVLVGALMGATAMSVIYSAGVPAEAAGSSTYKELSVFGDVFERVRAQYVTPPAE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
DKLIENAINGMLSSLDPHSSYMNAKDAEDMRTQTKGEFGGLGIEVTMEDELVKVITPIDD
HHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCCC
TPAAKAGVLAGDYISEIDGQSVRGLKLEDAVEKMRGAVNTPIKLTLIRKGADKPIELTIV
CCCCHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEH
RDVVAVQAVKSRVEDDVGYLRIISFTEKTYPDMEKAIKKIKDTVPADKLKGYVLDLRLNP
HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCEEEEEEECC
GGLLDQAINVSDALLQRGEVVSTRGRNPDETRRFNAGPGDLTDGKPVIVLINGGSASASE
CCHHHHHCCHHHHHHHCCCEEECCCCCCCHHCCCCCCCCCCCCCCEEEEEEECCCCCHHH
IVAGALQDLRRATVLGTRSFGKGSVQTIIPLGENGALRLTTALYYTPSGRSIQGTGITPD
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCEEECCCCCCC
IKVEEPLPEELQGKMVTEGESSLRGHIKGQSETDEGSGSVAYVPPDPKDDVQLNYALDLL
CEECCCCCHHHCCCEEECCCHHHHEEECCCCCCCCCCCEEEECCCCCCCCEEEHHHHHHH
RGKKTDPAFPPNPDKAVVAK
HCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]