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The map label for this gene is kamA [H]

Identifier: 209551368

GI number: 209551368

Start: 3928418

End: 3929470

Strand: Reverse

Name: kamA [H]

Synonym: Rleg2_3797

Alternate gene names: 209551368

Gene position: 3929470-3928418 (Counterclockwise)

Preceding gene: 209551369

Following gene: 209551367

Centisome position: 86.59

GC content: 62.58

Gene sequence:

>1053_bases
ATGAATGTCGTCAAACCGCTCAAGAGTGCCGACGATCTGGTGATGGCGGGGCTGGTCGCGCCGGCCGATCGCAGAGCGCT
CGAGGAGGTTGCCGCGCGTTATGCGATTGCCCTGACGCCCGACATGACCAGGCTGATTGATCGCGCCGATCCCGATGATC
CGATCGCGCGTCAGTTCGTGCCCGATGCGGCCGAACTGACGATCTTGCCCGAAGAACGCGCCGATCCGATCGGCGATCAC
GCCCATAGCCCGGTCGAAGGCATCGTTCACCGCTATCCCGATCGTGTGCTGCTGAAGGCCGTGCATGTCTGCCCGGTCTA
TTGCCGCTTCTGCTTCCGGCGCGAAATGGTCGGGCCGCAGGGTCTCGGCACGCTCGATGCGGCGGCGATGCAGGCAGCCT
TTGATTATATCAGAGGCCACGAGGAGATCTGGGAGGTTATCCTCACCGGTGGCGATCCGCTGGTGCTGTCTCCGCGCCGC
CTTCGCGACATCATGGAGGCCTTGGCGGACATTGCGCATGTGAAGATCGTGCGTTTCCACACGCGTGTTCCCGTCGTCGA
TCCCGACAAGGTCGACGCGGCGCTGGTCGACGCGCTGAAGGCGAGCGGCAAGACGGTCTATGTGGCGCTGCATGCCAATC
ATGTCAGGGAACTGACGGCGGAAGCGCGTGCCGCCTGCGCCCGTCTCATCGATGCCGGCATCGCCATGGTCAGCCAATCG
GTGCTGCTCAAAGGCGTCAACGACGATCCCGATGTGCTTGCGGCGCTGATGAAGGCCTTCGTCGAAATCCGCGTCAAACC
CTATTATCTGCATCACCCGGATCTGGCGCCCGGCACCGGCCATTTCAGATTGACGATCGAGGAGGGACAAAGGATCGTCT
CGCAGTTGCGCGGACGGATTTCCGGGCTCTGCCAGCCGACCTACATCCTCGATATTCCGGGCGGTTACGGCAAAACCGTC
GTCAGCGGCAGCACCGTGCAGGCCAGGGGTGATGGATGTTATTCCGTCTCGGATTATCGCGGTGACGAGCATTCCTACCC
GCCCGCCGAATGA

Upstream 100 bases:

>100_bases
CAAGCGGCATCGCGCTCGGCTTCGACCGGCTGGTAATGCTGGCGACGGGAGCGTCGCGCATCGATCAGGTGCTCTGGGCG
CCGGTAGCGGAGTATGGACG

Downstream 100 bases:

>100_bases
GGCAAAGCCCGCCTTCCCGTGTCATTTCTGTACTCGCTGCGGCGAAAATTGCGTCGCGCGCCGTCAACTAAATCGGCGTA
AGACGTTGATTTTAAATCAA

Product: lysine 2,3-aminomutase YodO family protein

Products: NA

Alternate protein names: LAM; KAM [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNVVKPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAAELTILPEERADPIGDH
AHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGTLDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRR
LRDIMEALADIAHVKIVRFHTRVPVVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQS
VLLKGVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLCQPTYILDIPGGYGKTV
VSGSTVQARGDGCYSVSDYRGDEHSYPPAE

Sequences:

>Translated_350_residues
MNVVKPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAAELTILPEERADPIGDH
AHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGTLDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRR
LRDIMEALADIAHVKIVRFHTRVPVVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQS
VLLKGVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLCQPTYILDIPGGYGKTV
VSGSTVQARGDGCYSVSDYRGDEHSYPPAE
>Mature_350_residues
MNVVKPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAAELTILPEERADPIGDH
AHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGTLDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRR
LRDIMEALADIAHVKIVRFHTRVPVVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQS
VLLKGVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLCQPTYILDIPGGYGKTV
VSGSTVQARGDGCYSVSDYRGDEHSYPPAE

Specific function: Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine [H]

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=274, Percent_Identity=35.4014598540146, Blast_Score=179, Evalue=2e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022459
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: =5.4.3.2 [H]

Molecular weight: Translated: 38227; Mature: 38227

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVKPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFV
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCHHHHHHC
PDAAELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQ
CCCHHEEECCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGTLDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFH
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHEEEEEE
TRVPVVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQS
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKGVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRI
HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHH
SGLCQPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPAE
HCCCCCEEEEECCCCCCCEEECCCEEEECCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNVVKPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFV
CCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHCCCCCCHHHHHHC
PDAAELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQ
CCCHHEEECCHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLGTLDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFH
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHEEEEEE
TRVPVVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQS
CCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLKGVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRI
HHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHHH
SGLCQPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPAE
HCCCCCEEEEECCCCCCCEEECCCEEEECCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10629195 [H]