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The map label for this gene is ycaR [C]

Identifier: 209551344

GI number: 209551344

Start: 3897408

End: 3897596

Strand: Reverse

Name: ycaR [C]

Synonym: Rleg2_3773

Alternate gene names: 209551344

Gene position: 3897596-3897408 (Counterclockwise)

Preceding gene: 209551345

Following gene: 209551342

Centisome position: 85.89

GC content: 57.67

Gene sequence:

>189_bases
ATGGACGAAAAACTCAGCCGCGTCGATCCAAAGCTGCTCGATCTCCTGGTCTGCCCGCTCTCCAAGGGCCGGCTTTCCTA
TGATCGCGAGCACAATGAGCTTGTCTCGGAAAAGGCGCGGCTTGCCTATCCGATCCGCGATGGTATTCCGATCATGCTGG
TCTCTGAAGCCCGCCGCCTCGACGAATAA

Upstream 100 bases:

>100_bases
CGATCTGAAGACGCGGGCCGAAACGCTGATCGCCATTACCGAGATCGTGCTGGCGCGCGTCTTCGGAGACTCCGACACGG
TTCTGCAGTAAACTTCAGCC

Downstream 100 bases:

>100_bases
CGTCTCTGAAAATCGGGTTTTAGATCGCTTGGCCGGCCAGCAGCCGCGGATTGTCCTTTGCCGTCGTTCCGGCCGCCTGG
CCGATGAAGAAGGACTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDEKLSRVDPKLLDLLVCPLSKGRLSYDREHNELVSEKARLAYPIRDGIPIMLVSEARRLDE

Sequences:

>Translated_62_residues
MDEKLSRVDPKLLDLLVCPLSKGRLSYDREHNELVSEKARLAYPIRDGIPIMLVSEARRLDE
>Mature_62_residues
MDEKLSRVDPKLLDLLVCPLSKGRLSYDREHNELVSEKARLAYPIRDGIPIMLVSEARRLDE

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3773_RHILW (B5ZTJ9)

Other databases:

- EMBL:   CP001191
- RefSeq:   YP_002283261.1
- ProteinModelPortal:   B5ZTJ9
- SMR:   B5ZTJ9
- GeneID:   6982535
- GenomeReviews:   CP001191_GR
- KEGG:   rlt:Rleg2_3773
- HOGENOM:   HBG713593
- OMA:   NELVSEK
- ProtClustDB:   CLSK886523
- HAMAP:   MF_01187
- InterPro:   IPR005651

Pfam domain/function: PF03966 Trm112p

EC number: NA

Molecular weight: Translated: 7164; Mature: 7164

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKLSRVDPKLLDLLVCPLSKGRLSYDREHNELVSEKARLAYPIRDGIPIMLVSEARRL
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHCC
DE
CC
>Mature Secondary Structure
MDEKLSRVDPKLLDLLVCPLSKGRLSYDREHNELVSEKARLAYPIRDGIPIMLVSEARRL
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCHHCC
DE
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA