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The map label for this gene is ugpB [C]

Identifier: 209551196

GI number: 209551196

Start: 3743779

End: 3745017

Strand: Reverse

Name: ugpB [C]

Synonym: Rleg2_3622

Alternate gene names: 209551196

Gene position: 3745017-3743779 (Counterclockwise)

Preceding gene: 209551197

Following gene: 209551195

Centisome position: 82.53

GC content: 60.45

Gene sequence:

>1239_bases
ATGATCAAGCGTCTTTTGGCGGCGACCAGCATCGCTAGCTTATGCCTGTTTTCGGCTGCGTCGGCGGCTGAAAATGTCGA
AATGTGGGTTCGCTCGGGCATCGGCGACGCCTTCAAGAAGGTCGTCGAAGCCTATAATTCCGGCCATGAGACCAAGGTCG
TGATGACCGAAGTGCCGTTCTCCGAACTGGTGCAGAAATATGCGACGGCGATCGCCGGCGGACAGGCGCCCGACGCCCTG
TCGATGGACCTCATCTATAATCCTGCCTTTGCCGCCGCCGGCCAGCTTGAGGATCTGACGGACTGGGCGAAATCGCTGCC
CTATTTCAACTCGCTGTCGCCGTCGCATGTACGGCTCGGCACCTATCAGGACAAGATTTACGGCCTGCCGCTCTCGGTGG
AGACATCGGTCTTCGCCTGGAACAAGGATCTCTACAAGAAGGCCGGCCTCGACCCGGACAAGGCGCCTGCCAACTGGGAT
GAAATCACCGCCAATGCCGAGAAGATCCGGGCCCTCGGTGACGACACCTATGGCTTTTATTTCTCCGGCGGCGGCTGCGG
CGGCTGCATGATCTTCACCTTCACGCCGCTCACCTGGGGTGCAGGCGCCGATATCCTGTCGGCCGACAGCAAGACGGCGA
CGCTTGATACCCCGCAGATGCGCAAGGCTGTCGATATCTACCGCAACATGGTCAAGAAGGACCTGGTGCCGGCGGGCGCG
GCCAGCGATACCGGCGCCAACTTCCTGACCTTCACCAACGGCAAGATCGGCCAGCAGAGCCTCGGCGCCTTTGCCATCGG
CACGCTGGTGACCGAGCACCCCGACATCAATTTCGGCGTGACGCTTATCCCGGGCGTCGACGGCAAGCCTTCGTCCTTTG
CCGGTGGCGACAATTTCGTCATCACCAAGGGCACGAAGAAGATCGATGCGGTGAAGGGCTTCCTCGAATATGTCTATTCG
GAAGACGGCCAGAAGATCATGGCGAAATACGGCAGCCTGCCGACGCGCGGCGATATTGCCGACAAGGTGCTGGAAGGACT
CGATCCGCGCATGCAGGTCGGCCTCAAGGCGATCAGTGTCGCCAAGACGCCCTATACGCTGCAGTTCAACGACTTGATCA
ACAGCGCCAACGGGCCGTGGGCGAGCTTCACCAACGCCGCGATCTTCGGCGACGATGTCGACGGCGCGTTTTCGAGCGCC
CAGTCGGAAATGCAATCGATCATCGATAGCGGCCAGTAA

Upstream 100 bases:

>100_bases
AGTCATGCGGGGGCAAAGCCCCCGCTGAGTGAGACCAAGGGAAAAGTATCAAGAGAATGAGCAAAGGCGCAGGGAGATGC
GCCATATCGGGAGGAGTGTC

Downstream 100 bases:

>100_bases
CTCTCCCCCCGGCCGCGGCCGGGGAGCGGTGGCAGCTTCCCGGCCAATCCCAACCGACAGATGCGGAGCGTTTCGATGAC
CGGTTCCGGTTCAGAGATCC

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MIKRLLAATSIASLCLFSAASAAENVEMWVRSGIGDAFKKVVEAYNSGHETKVVMTEVPFSELVQKYATAIAGGQAPDAL
SMDLIYNPAFAAAGQLEDLTDWAKSLPYFNSLSPSHVRLGTYQDKIYGLPLSVETSVFAWNKDLYKKAGLDPDKAPANWD
EITANAEKIRALGDDTYGFYFSGGGCGGCMIFTFTPLTWGAGADILSADSKTATLDTPQMRKAVDIYRNMVKKDLVPAGA
ASDTGANFLTFTNGKIGQQSLGAFAIGTLVTEHPDINFGVTLIPGVDGKPSSFAGGDNFVITKGTKKIDAVKGFLEYVYS
EDGQKIMAKYGSLPTRGDIADKVLEGLDPRMQVGLKAISVAKTPYTLQFNDLINSANGPWASFTNAAIFGDDVDGAFSSA
QSEMQSIIDSGQ

Sequences:

>Translated_412_residues
MIKRLLAATSIASLCLFSAASAAENVEMWVRSGIGDAFKKVVEAYNSGHETKVVMTEVPFSELVQKYATAIAGGQAPDAL
SMDLIYNPAFAAAGQLEDLTDWAKSLPYFNSLSPSHVRLGTYQDKIYGLPLSVETSVFAWNKDLYKKAGLDPDKAPANWD
EITANAEKIRALGDDTYGFYFSGGGCGGCMIFTFTPLTWGAGADILSADSKTATLDTPQMRKAVDIYRNMVKKDLVPAGA
ASDTGANFLTFTNGKIGQQSLGAFAIGTLVTEHPDINFGVTLIPGVDGKPSSFAGGDNFVITKGTKKIDAVKGFLEYVYS
EDGQKIMAKYGSLPTRGDIADKVLEGLDPRMQVGLKAISVAKTPYTLQFNDLINSANGPWASFTNAAIFGDDVDGAFSSA
QSEMQSIIDSGQ
>Mature_412_residues
MIKRLLAATSIASLCLFSAASAAENVEMWVRSGIGDAFKKVVEAYNSGHETKVVMTEVPFSELVQKYATAIAGGQAPDAL
SMDLIYNPAFAAAGQLEDLTDWAKSLPYFNSLSPSHVRLGTYQDKIYGLPLSVETSVFAWNKDLYKKAGLDPDKAPANWD
EITANAEKIRALGDDTYGFYFSGGGCGGCMIFTFTPLTWGAGADILSADSKTATLDTPQMRKAVDIYRNMVKKDLVPAGA
ASDTGANFLTFTNGKIGQQSLGAFAIGTLVTEHPDINFGVTLIPGVDGKPSSFAGGDNFVITKGTKKIDAVKGFLEYVYS
EDGQKIMAKYGSLPTRGDIADKVLEGLDPRMQVGLKAISVAKTPYTLQFNDLINSANGPWASFTNAAIFGDDVDGAFSSA
QSEMQSIIDSGQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 43908; Mature: 43908

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRLLAATSIASLCLFSAASAAENVEMWVRSGIGDAFKKVVEAYNSGHETKVVMTEVPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCH
SELVQKYATAIAGGQAPDALSMDLIYNPAFAAAGQLEDLTDWAKSLPYFNSLSPSHVRLG
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEC
TYQDKIYGLPLSVETSVFAWNKDLYKKAGLDPDKAPANWDEITANAEKIRALGDDTYGFY
CCHHHHEECCEECCCEEEEECHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCEEE
FSGGGCGGCMIFTFTPLTWGAGADILSADSKTATLDTPQMRKAVDIYRNMVKKDLVPAGA
EECCCCCCEEEEEECCCCCCCCCCEECCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCC
ASDTGANFLTFTNGKIGQQSLGAFAIGTLVTEHPDINFGVTLIPGVDGKPSSFAGGDNFV
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEE
ITKGTKKIDAVKGFLEYVYSEDGQKIMAKYGSLPTRGDIADKVLEGLDPRMQVGLKAISV
EECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEE
AKTPYTLQFNDLINSANGPWASFTNAAIFGDDVDGAFSSAQSEMQSIIDSGQ
ECCCEEEEHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRLLAATSIASLCLFSAASAAENVEMWVRSGIGDAFKKVVEAYNSGHETKVVMTEVPF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEECCH
SELVQKYATAIAGGQAPDALSMDLIYNPAFAAAGQLEDLTDWAKSLPYFNSLSPSHVRLG
HHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEC
TYQDKIYGLPLSVETSVFAWNKDLYKKAGLDPDKAPANWDEITANAEKIRALGDDTYGFY
CCHHHHEECCEECCCEEEEECHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCCCCCEEE
FSGGGCGGCMIFTFTPLTWGAGADILSADSKTATLDTPQMRKAVDIYRNMVKKDLVPAGA
EECCCCCCEEEEEECCCCCCCCCCEECCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCC
ASDTGANFLTFTNGKIGQQSLGAFAIGTLVTEHPDINFGVTLIPGVDGKPSSFAGGDNFV
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEE
ITKGTKKIDAVKGFLEYVYSEDGQKIMAKYGSLPTRGDIADKVLEGLDPRMQVGLKAISV
EECCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHEEE
AKTPYTLQFNDLINSANGPWASFTNAAIFGDDVDGAFSSAQSEMQSIIDSGQ
ECCCEEEEHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA