| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is gltX [H]
Identifier: 209551131
GI number: 209551131
Start: 3684113
End: 3684994
Strand: Direct
Name: gltX [H]
Synonym: Rleg2_3555
Alternate gene names: 209551131
Gene position: 3684113-3684994 (Clockwise)
Preceding gene: 209551128
Following gene: 209551133
Centisome position: 81.18
GC content: 65.65
Gene sequence:
>882_bases ATGACCACGAGCGAGCGTCAAAAACCTGTCTTTCGTTTTGCGCCGAGCCCCAACGGGCAGCTGCATCTCGGTCATGCCTT CTCGGCCCTCTTGAACCGCGACATGGCGGAGGCCGAGCATGGCCGCCTGCTGTTGCGCATCGAGGATATCGACCAGACGC GCTGCACGCCCGAGTTCGAGGCCGGCATCCTCAGGGATCTCGACTGGCTGGGGATTGGCTGGGAAAGCCCGGTGCGGCGA CAGTCGGAACATTTCCCCGAATATCAGGCGGCACTGCACGCGCTGATCGAACGCGGCCTGGTCTATCCGGCCTTCCTGAC GCGCGGCGAGGTGAAGACGCGCGTTACAGCCTATGAGGCGGCCGGCAGGTCCTGGCCGCGCGATCCCGACGGCACGCCGC ATTACCCCGCAAGCGATCGCGAGCGCCCGGAAGACGAATGGCGGGAGATGCTGACCTCGGGGAAGAAACATGCCTGGCGC CTCGATATGCGCAAGGCGCTCGACCTGATCGGCGAGATGCTGTTCTGGACCGAAACCGGCGACGGCAGATCGGGCGAGAT CGCCGCCGAGCCGGACGTCTGGGGCGATGTCATCCTGTCGCGCTCGGACGCCCCGTCGAGCTATCATCTTTCGGTGGTGG TCGACGATGCGCTCCAGGGTGTCACCCATGTGGTGCGCGGGCTCGACCTCTTCCCCGCCACCTCGGTGCACCGGCTGCTG CAAGTCCTGCTCGGCCTGCCGCAGCCCCTCTATCACCACCATCGTCTCATTCTCGACGATGCCGGCCGCAAGCTTTCGAA AAGCCAGGGCGACAGCGGGATTGGCGAATTGCGGGCCCGCGGCATGTCAGGGGCCGATATTCGCCGCCTTGTCGGGCTCT GA
Upstream 100 bases:
>100_bases AAGCAGCGCTTCGAGCCCTTGCCTGACGTCGTCTTCGTTGCGGATGATCTGCACATCGCCTCGCAGTGGTTCGAAACCTA AATCCATGGCAGAAGAAAGC
Downstream 100 bases:
>100_bases TGCCCGTTCGGCACGCTCTCTGCCGACGATCGAAAGCGTGTGGGAAAACATCCGGAAGACGCGGAACTTGATCAGCGCCG CATTGATCTCGGCGCCGATG
Product: glutamyl-Q tRNA(Asp) synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTTSERQKPVFRFAPSPNGQLHLGHAFSALLNRDMAEAEHGRLLLRIEDIDQTRCTPEFEAGILRDLDWLGIGWESPVRR QSEHFPEYQAALHALIERGLVYPAFLTRGEVKTRVTAYEAAGRSWPRDPDGTPHYPASDRERPEDEWREMLTSGKKHAWR LDMRKALDLIGEMLFWTETGDGRSGEIAAEPDVWGDVILSRSDAPSSYHLSVVVDDALQGVTHVVRGLDLFPATSVHRLL QVLLGLPQPLYHHHRLILDDAGRKLSKSQGDSGIGELRARGMSGADIRRLVGL
Sequences:
>Translated_293_residues MTTSERQKPVFRFAPSPNGQLHLGHAFSALLNRDMAEAEHGRLLLRIEDIDQTRCTPEFEAGILRDLDWLGIGWESPVRR QSEHFPEYQAALHALIERGLVYPAFLTRGEVKTRVTAYEAAGRSWPRDPDGTPHYPASDRERPEDEWREMLTSGKKHAWR LDMRKALDLIGEMLFWTETGDGRSGEIAAEPDVWGDVILSRSDAPSSYHLSVVVDDALQGVTHVVRGLDLFPATSVHRLL QVLLGLPQPLYHHHRLILDDAGRKLSKSQGDSGIGELRARGMSGADIRRLVGL >Mature_292_residues TTSERQKPVFRFAPSPNGQLHLGHAFSALLNRDMAEAEHGRLLLRIEDIDQTRCTPEFEAGILRDLDWLGIGWESPVRRQ SEHFPEYQAALHALIERGLVYPAFLTRGEVKTRVTAYEAAGRSWPRDPDGTPHYPASDRERPEDEWREMLTSGKKHAWRL DMRKALDLIGEMLFWTETGDGRSGEIAAEPDVWGDVILSRSDAPSSYHLSVVVDDALQGVTHVVRGLDLFPATSVHRLLQ VLLGLPQPLYHHHRLILDDAGRKLSKSQGDSGIGELRARGMSGADIRRLVGL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=280, Percent_Identity=33.5714285714286, Blast_Score=125, Evalue=5e-29, Organism=Escherichia coli, GI1788743, Length=270, Percent_Identity=30.7407407407407, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI226510925, Length=259, Percent_Identity=34.3629343629344, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786895, Length=115, Percent_Identity=34.7826086956522, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71993394, Length=283, Percent_Identity=26.5017667844523, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6324540, Length=278, Percent_Identity=31.6546762589928, Blast_Score=124, Evalue=2e-29, Organism=Saccharomyces cerevisiae, GI6321192, Length=93, Percent_Identity=39.7849462365591, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6324742, Length=102, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665321, Length=279, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=6e-28,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020752 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 32917; Mature: 32785
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSERQKPVFRFAPSPNGQLHLGHAFSALLNRDMAEAEHGRLLLRIEDIDQTRCTPEFE CCCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHH AGILRDLDWLGIGWESPVRRQSEHFPEYQAALHALIERGLVYPAFLTRGEVKTRVTAYEA HHHHHCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH AGRSWPRDPDGTPHYPASDRERPEDEWREMLTSGKKHAWRLDMRKALDLIGEMLFWTETG HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECC DGRSGEIAAEPDVWGDVILSRSDAPSSYHLSVVVDDALQGVTHVVRGLDLFPATSVHRLL CCCCCCEEECCCCHHHHHEECCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHH QVLLGLPQPLYHHHRLILDDAGRKLSKSQGDSGIGELRARGMSGADIRRLVGL HHHHCCCCHHHHHCEEEEHHHCCHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure TTSERQKPVFRFAPSPNGQLHLGHAFSALLNRDMAEAEHGRLLLRIEDIDQTRCTPEFE CCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHH AGILRDLDWLGIGWESPVRRQSEHFPEYQAALHALIERGLVYPAFLTRGEVKTRVTAYEA HHHHHCCHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH AGRSWPRDPDGTPHYPASDRERPEDEWREMLTSGKKHAWRLDMRKALDLIGEMLFWTETG HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECC DGRSGEIAAEPDVWGDVILSRSDAPSSYHLSVVVDDALQGVTHVVRGLDLFPATSVHRLL CCCCCCEEECCCCHHHHHEECCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHH QVLLGLPQPLYHHHRLILDDAGRKLSKSQGDSGIGELRARGMSGADIRRLVGL HHHHCCCCHHHHHCEEEEHHHCCHHHHCCCCCCHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]