| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is nrdI [H]
Identifier: 209551075
GI number: 209551075
Start: 3617414
End: 3617818
Strand: Reverse
Name: nrdI [H]
Synonym: Rleg2_3499
Alternate gene names: 209551075
Gene position: 3617818-3617414 (Counterclockwise)
Preceding gene: 209551076
Following gene: 209551074
Centisome position: 79.72
GC content: 60.0
Gene sequence:
>405_bases ATGGGGCTGATCGTCTATTATTCCAGCCGATCCGAAAATACCCATCGCTTCGTTGCCAGGCTCGGACTGCGCGCGGCGCG CATTCCGGCGGGCGGTGCGGATGCGTTCCATATCCGCGAACCCTTCGTGCTTGTCGTGCCGACCTATAGCGACGGCGACG GCAAGGGCGCCGTTCCCAAGCAGGTGATCCGTTTCTTGAACGATGCGGAGAACCGAGGACACATTCGTGGCGTGATTGCC GCGGGCAACAGCAATTTCGGCGAGACATACGGGCTCGCCGGCGACGTGATCTCGCAGAAATGCCGGGTGCCGTACCTCTA CAGGTTCGAGCTCATCGGCACGGAGGAGGATGTCGCCAACGTCAAACACGGAATGGAACGATTTTGGACACGGGAACAAC TCTGA
Upstream 100 bases:
>100_bases CGGCTACATGCAGGCGCCGGTCGTGATCGCCGGCGAGCGGCATTGGGCGGGTTTCCGCCCCGATATGATCAGCGCGCTCT CCTGACCGAGGAAAAAGGCG
Downstream 100 bases:
>100_bases CGCGGGATGCGGGCGCAAAATCGCATAACAGTTTTGCTCATCCCGCCGGCGAACGCCCTTTGAAAGCGGCGGAAGCGCTC GATTATCACGCGCTGAACGC
Product: ribonucleotide reductase stimulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGLIVYYSSRSENTHRFVARLGLRAARIPAGGADAFHIREPFVLVVPTYSDGDGKGAVPKQVIRFLNDAENRGHIRGVIA AGNSNFGETYGLAGDVISQKCRVPYLYRFELIGTEEDVANVKHGMERFWTREQL
Sequences:
>Translated_134_residues MGLIVYYSSRSENTHRFVARLGLRAARIPAGGADAFHIREPFVLVVPTYSDGDGKGAVPKQVIRFLNDAENRGHIRGVIA AGNSNFGETYGLAGDVISQKCRVPYLYRFELIGTEEDVANVKHGMERFWTREQL >Mature_133_residues GLIVYYSSRSENTHRFVARLGLRAARIPAGGADAFHIREPFVLVVPTYSDGDGKGAVPKQVIRFLNDAENRGHIRGVIAA GNSNFGETYGLAGDVISQKCRVPYLYRFELIGTEEDVANVKHGMERFWTREQL
Specific function: Probably involved in ribonucleotide reductase function [H]
COG id: COG1780
COG function: function code F; Protein involved in ribonucleotide reduction
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nrdI family [H]
Homologues:
Organism=Escherichia coli, GI1789029, Length=132, Percent_Identity=58.3333333333333, Blast_Score=170, Evalue=4e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020852 - InterPro: IPR004465 [H]
Pfam domain/function: PF07972 Flavodoxin_NdrI [H]
EC number: NA
Molecular weight: Translated: 14928; Mature: 14797
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLIVYYSSRSENTHRFVARLGLRAARIPAGGADAFHIREPFVLVVPTYSDGDGKGAVPK CCEEEEECCCCCCHHHHHHHHCCHHEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCHH QVIRFLNDAENRGHIRGVIAAGNSNFGETYGLAGDVISQKCRVPYLYRFELIGTEEDVAN HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHH VKHGMERFWTREQL HHHHHHHHHHHCCC >Mature Secondary Structure GLIVYYSSRSENTHRFVARLGLRAARIPAGGADAFHIREPFVLVVPTYSDGDGKGAVPK CEEEEECCCCCCHHHHHHHHCCHHEECCCCCCCEEEECCCEEEEEEECCCCCCCCCCHH QVIRFLNDAENRGHIRGVIAAGNSNFGETYGLAGDVISQKCRVPYLYRFELIGTEEDVAN HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHH VKHGMERFWTREQL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA