BacMap

Definition	Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession	NC_011369
Length	4,537,948

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The map label for this gene is ucpA [H]

Identifier: 209551049

GI number: 209551049

Start: 3588533

End: 3589312

Strand: Reverse

Name: ucpA [H]

Synonym: Rleg2_3473

Alternate gene names: 209551049

Gene position: 3589312-3588533 (Counterclockwise)

Preceding gene: 209551050

Following gene: 209551048

Centisome position: 79.1

GC content: 61.79

Gene sequence:

>780_bases
ATGGGCGGCCGCCTGGAGGGCAAGCACATCCTGATAACCGGTGCCGCGCAGGGCATCGGTCTTGCGATGGCGAAGGCCTT
TATGACTGAGGATGCGGCCGTCTTTCTCGTCGACCGCGACGCCGCACTGCTCGCCAAGTCAACGAAAGAGCTGCAAAGCA
TCGGTGGACGGCTCGGCTATCTGCCGGCCGATATTACCGATGCCGGAACGATTACGACGTTGGTCGCGCAGGCGAATGAG
GAGATCGGGCAGCTGAACGCGCTCGTCAACAATGCCGGCGTCAATGTCTTCGCCGAACCGCTCGAGACGACCGACGAGAT
GTGGAACCGCTGTTTCGACATCAATCTCAAGGGTGCGTGGAACTGCTGCAAGGCGGTGCTGCCTGGCCTGATCGAACAGG
GCGGCGGCGTCATCCTCAACATCGCTTCGACGCACGCTTTCACCATCATCCCGCACACATTTCCCTATCCGCTGGCAAAA
CATGCGCTGCTGGGGATGACAAAATCCCTGGGGCTCGAATATGCGGCCCGCAACATCCGGGTGAACGCGCTGGCGCCGGG
CTATGTTTCGACGCAGAAGGTGATCGACTACTGGAACAGCTTTCCGGATCCGGAGGCTGCCAAAGCCGAGACGATGAGGC
TGCATCCCGGCGGGCGCATCGCGACGCCTGAGGAGATCGCCATGGCGGCCGTGTTCATGATCTCCGACGAGTGCCCGTTC
ATGAACGCCACCTGCCTGACGATCGACGGCGGTCTCAGCGTGCTGCAGCATCCGGCCTGA

Upstream 100 bases:

>100_bases
CTGATTTCGGCGGGCTCGCGCCGCTTGCGCCCGGCGAAATTCTTGCCGGCTCGGTGACGATTCTGATGTCGGCGCTGCCG
GTTCAATCGGAGGGGAGATG

Downstream 100 bases:

>100_bases
AAACGCTTCCACTCCGGCTGATTTTTACAGGCCTGTCGTCTTCTCAAGATAGAGCATTATATTGTCCATCGGGAAGGCTC
TCAGAACTCCCGAAGGCATG

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MGGRLEGKHILITGAAQGIGLAMAKAFMTEDAAVFLVDRDAALLAKSTKELQSIGGRLGYLPADITDAGTITTLVAQANE
EIGQLNALVNNAGVNVFAEPLETTDEMWNRCFDINLKGAWNCCKAVLPGLIEQGGGVILNIASTHAFTIIPHTFPYPLAK
HALLGMTKSLGLEYAARNIRVNALAPGYVSTQKVIDYWNSFPDPEAAKAETMRLHPGGRIATPEEIAMAAVFMISDECPF
MNATCLTIDGGLSVLQHPA

Sequences:

>Translated_259_residues
MGGRLEGKHILITGAAQGIGLAMAKAFMTEDAAVFLVDRDAALLAKSTKELQSIGGRLGYLPADITDAGTITTLVAQANE
EIGQLNALVNNAGVNVFAEPLETTDEMWNRCFDINLKGAWNCCKAVLPGLIEQGGGVILNIASTHAFTIIPHTFPYPLAK
HALLGMTKSLGLEYAARNIRVNALAPGYVSTQKVIDYWNSFPDPEAAKAETMRLHPGGRIATPEEIAMAAVFMISDECPF
MNATCLTIDGGLSVLQHPA
>Mature_258_residues
GGRLEGKHILITGAAQGIGLAMAKAFMTEDAAVFLVDRDAALLAKSTKELQSIGGRLGYLPADITDAGTITTLVAQANEE
IGQLNALVNNAGVNVFAEPLETTDEMWNRCFDINLKGAWNCCKAVLPGLIEQGGGVILNIASTHAFTIIPHTFPYPLAKH
ALLGMTKSLGLEYAARNIRVNALAPGYVSTQKVIDYWNSFPDPEAAKAETMRLHPGGRIATPEEIAMAAVFMISDECPFM
NATCLTIDGGLSVLQHPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=33.4677419354839, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI19923817, Length=266, Percent_Identity=28.5714285714286, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI66933014, Length=253, Percent_Identity=32.4110671936759, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=31.0756972111554, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI5031737, Length=249, Percent_Identity=28.5140562248996, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI126723191, Length=181, Percent_Identity=34.8066298342541, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=31.3253012048193, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI59889578, Length=228, Percent_Identity=31.5789473684211, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI40254992, Length=245, Percent_Identity=27.7551020408163, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=31.0526315789474, Blast_Score=92, Evalue=5e-19,
Organism=Homo sapiens, GI10190704, Length=248, Percent_Identity=26.6129032258064, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI210032110, Length=188, Percent_Identity=29.7872340425532, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4758504, Length=270, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=30.5699481865285, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI31542939, Length=195, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI302344755, Length=103, Percent_Identity=41.747572815534, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI15277342, Length=261, Percent_Identity=25.6704980842912, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI142976729, Length=188, Percent_Identity=28.7234042553192, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI4503301, Length=227, Percent_Identity=26.8722466960352, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI109715829, Length=240, Percent_Identity=25.4166666666667, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI7706318, Length=197, Percent_Identity=28.4263959390863, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI83715985, Length=263, Percent_Identity=28.1368821292776, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI4504505, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI210032112, Length=188, Percent_Identity=27.1276595744681, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI40807363, Length=189, Percent_Identity=25.3968253968254, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI209862901, Length=200, Percent_Identity=26.5, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI19923983, Length=200, Percent_Identity=26.5, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503817, Length=232, Percent_Identity=25.4310344827586, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=38.8888888888889, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=31.8897637795276, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=30.8, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=30.241935483871, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787905, Length=248, Percent_Identity=31.0483870967742, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1786812, Length=252, Percent_Identity=30.5555555555556, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87082160, Length=253, Percent_Identity=29.6442687747036, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788459, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=29.4354838709677, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=255, Percent_Identity=28.2352941176471, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=28.4584980237154, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=26.6129032258064, Blast_Score=69, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=31.25, Blast_Score=134, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17560676, Length=248, Percent_Identity=29.0322580645161, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=30, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=29.520295202952, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=255, Percent_Identity=29.8039215686275, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=28.2527881040892, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17561272, Length=261, Percent_Identity=30.6513409961686, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17544670, Length=271, Percent_Identity=28.4132841328413, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=272, Percent_Identity=27.5735294117647, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=26.5625, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71994604, Length=254, Percent_Identity=26.3779527559055, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=282, Percent_Identity=26.5957446808511, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=26.5917602996255, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=260, Percent_Identity=26.5384615384615, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=271, Percent_Identity=29.520295202952, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=270, Percent_Identity=25.9259259259259, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=25.1282051282051, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=190, Percent_Identity=27.3684210526316, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=268, Percent_Identity=26.865671641791, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508895, Length=190, Percent_Identity=28.4210526315789, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=275, Percent_Identity=26.5454545454545, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193203115, Length=189, Percent_Identity=27.5132275132275, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=27.1375464684015, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=258, Percent_Identity=27.906976744186, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=25.9259259259259, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI193204405, Length=279, Percent_Identity=27.5985663082437, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=261, Percent_Identity=27.2030651340996, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=190, Percent_Identity=25.2631578947368, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=279, Percent_Identity=25.4480286738351, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=274, Percent_Identity=24.4525547445255, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=273, Percent_Identity=26.7399267399267, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=197, Percent_Identity=27.9187817258883, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=196, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6322226, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323882, Length=195, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6322227, Length=199, Percent_Identity=29.6482412060301, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=28.2868525896414, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=32.8, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=30.0395256916996, Blast_Score=104, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24643142, Length=258, Percent_Identity=31.3953488372093, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=29.6, Blast_Score=100, Evalue=7e-22,
Organism=Drosophila melanogaster, GI21358495, Length=194, Percent_Identity=31.4432989690722, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=27.3809523809524, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=27.6, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356301, Length=229, Percent_Identity=26.6375545851528, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI17737361, Length=267, Percent_Identity=28.4644194756554, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24644337, Length=256, Percent_Identity=28.90625, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI18859837, Length=189, Percent_Identity=26.4550264550265, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24640492, Length=204, Percent_Identity=25.4901960784314, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281364892, Length=170, Percent_Identity=25.8823529411765, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27552; Mature: 27421

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRLEGKHILITGAAQGIGLAMAKAFMTEDAAVFLVDRDAALLAKSTKELQSIGGRLGY
CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
LPADITDAGTITTLVAQANEEIGQLNALVNNAGVNVFAEPLETTDEMWNRCFDINLKGAW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEEEECCCCHH
NCCKAVLPGLIEQGGGVILNIASTHAFTIIPHTFPYPLAKHALLGMTKSLGLEYAARNIR
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHCEEE
VNALAPGYVSTQKVIDYWNSFPDPEAAKAETMRLHPGGRIATPEEIAMAAVFMISDECPF
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEEEEEECCCCC
MNATCLTIDGGLSVLQHPA
CCEEEEEECCCHHHHCCCC
>Mature Secondary Structure 
GGRLEGKHILITGAAQGIGLAMAKAFMTEDAAVFLVDRDAALLAKSTKELQSIGGRLGY
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCC
LPADITDAGTITTLVAQANEEIGQLNALVNNAGVNVFAEPLETTDEMWNRCFDINLKGAW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHEEEECCCCHH
NCCKAVLPGLIEQGGGVILNIASTHAFTIIPHTFPYPLAKHALLGMTKSLGLEYAARNIR
HHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHCHHHHHCEEE
VNALAPGYVSTQKVIDYWNSFPDPEAAKAETMRLHPGGRIATPEEIAMAAVFMISDECPF
EEEECCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCHHHHHHEEEEEEECCCCC
MNATCLTIDGGLSVLQHPA
CCEEEEEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]