Click here to switch to the map view.

The map label for this gene is osmC [H]

Identifier: 209551048

GI number: 209551048

Start: 3587950

End: 3588381

Strand: Reverse

Name: osmC [H]

Synonym: Rleg2_3472

Alternate gene names: 209551048

Gene position: 3588381-3587950 (Counterclockwise)

Preceding gene: 209551049

Following gene: 209551047

Centisome position: 79.07

GC content: 62.04

Gene sequence:

>432_bases
ATGCAGATCAATCGTACGGCTTCGGCCCATTGGACCGGTGGCCTCAAAGACGGCAAAGGCCTGATCTCGACGCAGAGCGG
CGCTCTCAAGGATTATCCCTACGGCTTTGCCAGCCGCTTCGAAGGCATTGCCGGCACCAACCCGGAAGAGCTGATCGGTG
CCGCCCATGCCGGTTGCTTCACCATGGCGCTGTCGTTGATCCTCGGGGAAGCCGGTTTTACCGCCGAGCATATGGAAACC
TCCGCCAAGGTAACGCTCGAAAGCGTCGAGGGCGGCTTTGCCATCACCGCCATCCATCTTTCGCTCTCCGGCCGGATTCC
CGGCGCCGATGAGGCGACCTTCACCGAACTTGCCAACAAGGCAAAGGCCGGCTGCCCGATTTCCAAGGCGCTCGCCGCCG
TTCCGATCACGCTCGACGTCAAGCTGGCCTGA

Upstream 100 bases:

>100_bases
GAGCATTATATTGTCCATCGGGAAGGCTCTCAGAACTCCCGAAGGCATGGAGCGGCGCCCTGCCGCTTGCTCGAAAGCAC
AATCGAAACAGGAGGACGGC

Downstream 100 bases:

>100_bases
TTTCCTGCTGCCGCCGACGATGTGCCGCGCGCTTCCGCGCGGCACTTTTCAATTGTGCATTCGCAATTTAACGAACCGCC
ACTCATTGATGTATTGGTCG

Product: OsmC family protein

Products: NA

Alternate protein names: Osmotically-inducible protein C [H]

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQINRTASAHWTGGLKDGKGLISTQSGALKDYPYGFASRFEGIAGTNPEELIGAAHAGCFTMALSLILGEAGFTAEHMET
SAKVTLESVEGGFAITAIHLSLSGRIPGADEATFTELANKAKAGCPISKALAAVPITLDVKLA

Sequences:

>Translated_143_residues
MQINRTASAHWTGGLKDGKGLISTQSGALKDYPYGFASRFEGIAGTNPEELIGAAHAGCFTMALSLILGEAGFTAEHMET
SAKVTLESVEGGFAITAIHLSLSGRIPGADEATFTELANKAKAGCPISKALAAVPITLDVKLA
>Mature_143_residues
MQINRTASAHWTGGLKDGKGLISTQSGALKDYPYGFASRFEGIAGTNPEELIGAAHAGCFTMALSLILGEAGFTAEHMET
SAKVTLESVEGGFAITAIHLSLSGRIPGADEATFTELANKAKAGCPISKALAAVPITLDVKLA

Specific function: Preferentially metabolizes organic hydroperoxides over inorganic hydrogen peroxide [H]

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

Organism=Escherichia coli, GI1787757, Length=142, Percent_Identity=57.7464788732394, Blast_Score=167, Evalue=2e-43,

Paralogues:

None

Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR003718
- InterPro:   IPR019904 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 14693; Mature: 14693

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINRTASAHWTGGLKDGKGLISTQSGALKDYPYGFASRFEGIAGTNPEELIGAAHAGCF
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
TMALSLILGEAGFTAEHMETSAKVTLESVEGGFAITAIHLSLSGRIPGADEATFTELANK
HHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH
AKAGCPISKALAAVPITLDVKLA
HCCCCCHHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MQINRTASAHWTGGLKDGKGLISTQSGALKDYPYGFASRFEGIAGTNPEELIGAAHAGCF
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHH
TMALSLILGEAGFTAEHMETSAKVTLESVEGGFAITAIHLSLSGRIPGADEATFTELANK
HHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCHHHHHHHHH
AKAGCPISKALAAVPITLDVKLA
HCCCCCHHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1715407; 9097039; 9278503; 9298646; 14627744 [H]