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The map label for this gene is ycjN [C]

Identifier: 209551026

GI number: 209551026

Start: 3565387

End: 3566697

Strand: Reverse

Name: ycjN [C]

Synonym: Rleg2_3450

Alternate gene names: 209551026

Gene position: 3566697-3565387 (Counterclockwise)

Preceding gene: 209551027

Following gene: 209551025

Centisome position: 78.6

GC content: 61.33

Gene sequence:

>1311_bases
ATGACATTGAGAACTTTTCTGCTGGGCGCCTGCTCAGCACTGGCGTTTGCCGGCATGGCTTCGGCTGAGACGCTGACAAT
CGCAACCGTCAACAACGGCGACATGATCCGGATGCAAAAGCTGACGGATGATTTCAAGGCGAAGAATCCCGGCATCGACC
TTGAATGGGTCACCCTCGAAGAGAACGTGCTGCGCCAGAAGGTCACGACCGACATCGCGACCAAGGGCGGCCAGTACGAC
GTTTTGACGATCGGCACTTACGAAGTTCCGATCTGGGCAAAGCAGGGTTGGCTGCTGCCGCTCGACAATCTCGGCGCCAA
TTATGACGTCGACGACCTGCTGCCGGCGATCCGCAGTGGCCTGACCGTGGACGGCAAGCTCTATGCTGCGCCGTTCTACG
GCGAAAGCTCGATGGTCATGTATCGCAAGGACCTGTTTGACGCCGCCGGCCTGAAGATGCCCGACGCGCCGACCTGGGAT
TTCGTTGCCGACGCTGCCCGCAAGATCACTAACAAGGACAAGGAAATCTACGGCATCTGCCTGCGTGGGAAGGCCGGCTG
GGGCGAGAACATGGCCTTCCTGACGGCCATGTCCAACTCCTTCGGCGCTCGCTGGTTCGATGAAAAGTGGAAGCCGCAGT
TCGATCAGCCGGAGTGGAAGGACACGCTCGACTTCTACGTCAAGCTGATGAAGGATGCCGGCCCTCCGGGCGCTTCCTCC
AACGGCTTCAACGAGAACCTGGCGCTGTTCCAGACCGGCAAGTGCGGCATGTGGATCGACGCAACGGTTGCCGCTTCCTT
CGTCGCCGATCCGAAGCAGTCGCAGGTCGCCGACAAGGTCGGCTTTGCGCTCGCCCCGGACAAGGGCCTCGGCAAGCGCG
GCAACTGGCTCTGGGCCTGGAGCCTCGCCGTCCCGGCAGGTACGCAGAAGGCGGAAGCTGCCGAGAAGTTCGTCGCCTGG
GCGACGAGCAAGGAATACAGCAATCTCGTCGCTGAGAAGGAAGGCTGGCTGAACGCACCTCCGGGCACCCGCAAGTCGCT
CTATGCGAATGCGGACTACCAGAAGGCGGCGTCGTTTGCCAAGATGACGCTCGACTCGATCGAGGCGGCCGATCCGACCA
AGCCGACCGTCAAGCCGGTTCCTTATGTCGGCGTCCAGTTCGTGGCGATCCCGGAATTCCAGGGTATCGGTACGGCGGTG
GGTCAGCAGTTCTCGGCAGCCCTTGCCGGCCAGATTTCGGTCGACCAGGCGTTGAAGAGCGCACAGCAGCTGGCGACGCG
CGAAATGACCAAAGCCGGCTACATTAAGTAA

Upstream 100 bases:

>100_bases
GCACCGCAGCAACGATTGCCGATTGACATTCTTTATCGTTTATTGAGTAATTGCCCATGAGCGAAGCGAATGCTCACACC
CCATCTTCTGGGAGGAAGAT

Downstream 100 bases:

>100_bases
AACCTCCTGAGCAAGAGGCGGATTCTTGACGATCCGCCCCTCTGGGCCGCCGATTGCCCGAACTGCATCGGCGGCCGCTT
TTTCAGACAAAGCTTTCCTG

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTLRTFLLGACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLEENVLRQKVTTDIATKGGQYD
VLTIGTYEVPIWAKQGWLLPLDNLGANYDVDDLLPAIRSGLTVDGKLYAAPFYGESSMVMYRKDLFDAAGLKMPDAPTWD
FVADAARKITNKDKEIYGICLRGKAGWGENMAFLTAMSNSFGARWFDEKWKPQFDQPEWKDTLDFYVKLMKDAGPPGASS
NGFNENLALFQTGKCGMWIDATVAASFVADPKQSQVADKVGFALAPDKGLGKRGNWLWAWSLAVPAGTQKAEAAEKFVAW
ATSKEYSNLVAEKEGWLNAPPGTRKSLYANADYQKAASFAKMTLDSIEAADPTKPTVKPVPYVGVQFVAIPEFQGIGTAV
GQQFSAALAGQISVDQALKSAQQLATREMTKAGYIK

Sequences:

>Translated_436_residues
MTLRTFLLGACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLEENVLRQKVTTDIATKGGQYD
VLTIGTYEVPIWAKQGWLLPLDNLGANYDVDDLLPAIRSGLTVDGKLYAAPFYGESSMVMYRKDLFDAAGLKMPDAPTWD
FVADAARKITNKDKEIYGICLRGKAGWGENMAFLTAMSNSFGARWFDEKWKPQFDQPEWKDTLDFYVKLMKDAGPPGASS
NGFNENLALFQTGKCGMWIDATVAASFVADPKQSQVADKVGFALAPDKGLGKRGNWLWAWSLAVPAGTQKAEAAEKFVAW
ATSKEYSNLVAEKEGWLNAPPGTRKSLYANADYQKAASFAKMTLDSIEAADPTKPTVKPVPYVGVQFVAIPEFQGIGTAV
GQQFSAALAGQISVDQALKSAQQLATREMTKAGYIK
>Mature_435_residues
TLRTFLLGACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLEENVLRQKVTTDIATKGGQYDV
LTIGTYEVPIWAKQGWLLPLDNLGANYDVDDLLPAIRSGLTVDGKLYAAPFYGESSMVMYRKDLFDAAGLKMPDAPTWDF
VADAARKITNKDKEIYGICLRGKAGWGENMAFLTAMSNSFGARWFDEKWKPQFDQPEWKDTLDFYVKLMKDAGPPGASSN
GFNENLALFQTGKCGMWIDATVAASFVADPKQSQVADKVGFALAPDKGLGKRGNWLWAWSLAVPAGTQKAEAAEKFVAWA
TSKEYSNLVAEKEGWLNAPPGTRKSLYANADYQKAASFAKMTLDSIEAADPTKPTVKPVPYVGVQFVAIPEFQGIGTAVG
QQFSAALAGQISVDQALKSAQQLATREMTKAGYIK

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=318, Percent_Identity=27.9874213836478, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47481; Mature: 47350

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRTFLLGACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLE
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEECH
ENVLRQKVTTDIATKGGQYDVLTIGTYEVPIWAKQGWLLPLDNLGANYDVDDLLPAIRSG
HHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCEEEHHCCCCCCCHHHHHHHHHCC
LTVDGKLYAAPFYGESSMVMYRKDLFDAAGLKMPDAPTWDFVADAARKITNKDKEIYGIC
CEECCEEEEEEECCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
LRGKAGWGENMAFLTAMSNSFGARWFDEKWKPQFDQPEWKDTLDFYVKLMKDAGPPGASS
EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
NGFNENLALFQTGKCGMWIDATVAASFVADPKQSQVADKVGFALAPDKGLGKRGNWLWAW
CCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCHHHHHHHHCEEECCCCCCCCCCCEEEEE
SLAVPAGTQKAEAAEKFVAWATSKEYSNLVAEKEGWLNAPPGTRKSLYANADYQKAASFA
EEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHH
KMTLDSIEAADPTKPTVKPVPYVGVQFVAIPEFQGIGTAVGQQFSAALAGQISVDQALKS
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
AQQLATREMTKAGYIK
HHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLRTFLLGACSALAFAGMASAETLTIATVNNGDMIRMQKLTDDFKAKNPGIDLEWVTLE
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCEEEEECH
ENVLRQKVTTDIATKGGQYDVLTIGTYEVPIWAKQGWLLPLDNLGANYDVDDLLPAIRSG
HHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEECCCCEEEHHCCCCCCCHHHHHHHHHCC
LTVDGKLYAAPFYGESSMVMYRKDLFDAAGLKMPDAPTWDFVADAARKITNKDKEIYGIC
CEECCEEEEEEECCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE
LRGKAGWGENMAFLTAMSNSFGARWFDEKWKPQFDQPEWKDTLDFYVKLMKDAGPPGASS
EECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
NGFNENLALFQTGKCGMWIDATVAASFVADPKQSQVADKVGFALAPDKGLGKRGNWLWAW
CCCCCCEEEEECCCCCCEEEHHHHHHHHCCCCHHHHHHHHCEEECCCCCCCCCCCEEEEE
SLAVPAGTQKAEAAEKFVAWATSKEYSNLVAEKEGWLNAPPGTRKSLYANADYQKAASFA
EEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHH
KMTLDSIEAADPTKPTVKPVPYVGVQFVAIPEFQGIGTAVGQQFSAALAGQISVDQALKS
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHH
AQQLATREMTKAGYIK
HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA