Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is yfeH [C]

Identifier: 209550896

GI number: 209550896

Start: 3418651

End: 3419655

Strand: Direct

Name: yfeH [C]

Synonym: Rleg2_3320

Alternate gene names: 209550896

Gene position: 3418651-3419655 (Clockwise)

Preceding gene: 209550894

Following gene: 209550898

Centisome position: 75.33

GC content: 61.69

Gene sequence:

>1005_bases
ATGCGCCGTTTTCTGCCCGATACATTTACCACCCTGCTGGTCTGCACCGTCATTCTCGCCTCGCTGTTTCCGGCGAGCGG
CACATTCGCCGGCTATTTCGGCATCGCCACCGATCTTGCCATCGCCGCGCTGTTCTTCCTGCATGGCGCCCGCCTGTCGC
GTGACGTCGTCATAGCAGGCCTGTTGCACTGGCGCCTGCATCTCGTCATCCTGCTGACGACCTTCGGCATCTTCCCCTTG
CTTGGTCTCGGGCTCGGCTTCATCCCCGACACGATCCTGCCGCAGCCGCTTTATCTCGGCATTCTCTTCCTCTGCGTGCT
GCCGTCGACGGTGCAGTCGTCGATCGCCTTCACCTCGATGGCCGGCGGTAACGTGCCTGCCGCCATCTGCTCAGCCTCGG
CCTCCAACATTTTCGGCATGTTCCTGACGCCGCTGCTGGTCGGCCTGCTCTTTTCCGTCGGCGGCCATGGCGGATTCTCT
TTCGACGCCTTGCAGCAGATCCTGCTGCAGTTGCTTGCCCCCTTCATCGTCGGCCAGATCCTGCAGCCCTGGATCGGCGA
CTGGATTCGCGCCAAGAAGAAGATCCTGATGCCCGTCGACCGCGGCTCGATCCTGATGGTGGTCTATCTCGCCTTCTCGA
CGGCAGTGGTCGAGGGCCTGTGGCACACCTTCTCGATCGCCGATATCGCCGTCGTCATCGTCGCCGATATGGTTCTCCTT
GGAATCGTGCTGGTACTGACGATGCTCGGCAGCCGCTGGCTCGGCTTCAACAAGGCCGACGAGATCACCATCACTTTCTG
CGGCTCGAAGAAGAGCCTTGCAAGCGGTGTGCCGATGGCAAACGTCATCTTTTCAGGCCAGTCGATCGGCGCGATCGTGC
TGCCGCTGATGCTCTTCCATCAGATCCAGCTTATGGTCTGCGCCGTCATCGCCCAGAAATACGCCGCCGCCGCGGCCCGC
CGCGCAACAGAAAAGGAAATAGATGAAGCCGCCAGCCCGGCCTGA

Upstream 100 bases:

>100_bases
AGGTCCAGCATGATCCAATTTCTTGATAACTGTTATTTCTTGCATCGTGGATCATAATGGACGACAAAACAACGACTATC
TGTCACGCCGCGAGACCGTC

Downstream 100 bases:

>100_bases
ACCCATTGCCGCAATAAAAAACGGCGCCCCGATCGGAGCGCCGTTTTTTTTCTTAAGCGATGTGATTAGCCGTTGATGAC
CTGCGCCTCGATGGCCTTCG

Product: sodium symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL
LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS
FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL
GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR
RATEKEIDEAASPA

Sequences:

>Translated_334_residues
MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL
LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS
FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL
GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR
RATEKEIDEAASPA
>Mature_334_residues
MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAGLLHWRLHLVILLTTFGIFPL
LGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSMAGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFS
FDALQQILLQLLAPFIVGQILQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL
GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFHQIQLMVCAVIAQKYAAAAAR
RATEKEIDEAASPA

Specific function: Unknown

COG id: COG0385

COG function: function code R; Predicted Na+-dependent transporter

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfeH [H]

Homologues:

Organism=Homo sapiens, GI71725371, Length=341, Percent_Identity=27.2727272727273, Blast_Score=111, Evalue=8e-25,
Organism=Escherichia coli, GI1788749, Length=328, Percent_Identity=53.9634146341463, Blast_Score=325, Evalue=3e-90,
Organism=Saccharomyces cerevisiae, GI6323677, Length=320, Percent_Identity=23.4375, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002657
- InterPro:   IPR016833 [H]

Pfam domain/function: PF01758 SBF [H]

EC number: NA

Molecular weight: Translated: 35653; Mature: 35653

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHWRLHLVILLTTFGIFPLLGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHC
AGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFSFDALQQILLQLLAPFIVGQI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFH
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH
QIQLMVCAVIAQKYAAAAARRATEKEIDEAASPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRRFLPDTFTTLLVCTVILASLFPASGTFAGYFGIATDLAIAALFFLHGARLSRDVVIAG
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHWRLHLVILLTTFGIFPLLGLGLGFIPDTILPQPLYLGILFLCVLPSTVQSSIAFTSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHC
AGGNVPAAICSASASNIFGMFLTPLLVGLLFSVGGHGGFSFDALQQILLQLLAPFIVGQI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQPWIGDWIRAKKKILMPVDRGSILMVVYLAFSTAVVEGLWHTFSIADIAVVIVADMVLL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIVLVLTMLGSRWLGFNKADEITITFCGSKKSLASGVPMANVIFSGQSIGAIVLPLMLFH
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHH
QIQLMVCAVIAQKYAAAAARRATEKEIDEAASPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 1849605 [H]