| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is hemH [H]
Identifier: 209550880
GI number: 209550880
Start: 3393232
End: 3394266
Strand: Direct
Name: hemH [H]
Synonym: Rleg2_3304
Alternate gene names: 209550880
Gene position: 3393232-3394266 (Clockwise)
Preceding gene: 209550879
Following gene: 209550881
Centisome position: 74.77
GC content: 59.81
Gene sequence:
>1035_bases ATGACAGCAGATACTTCACTCCGCCCGGCAGACCATCCGGCCGTCAAGTCAGGCAAGGTCGGTGTCCTGCTGGTCAATCT CGGCACGCCCGATGGCACCGATTACACGTCGATGCGCCGCTATCTCCGGGAGTTCTTGACCGATCGCCGCGTCATCGAAT GGTCGCCGTGGAAGTGGTATCCGATCCTGTTCGGTGTCGTGCTCAACACCCGCCCGCGGAAAGTCGGCAAGGCCTATGAG CTGATCTGGAACAAGGAGAAGAACGAAAGTTATCTCCGCACTTATACGCGCAACCAGTCCGAGCTGATGGCCGAGCACCT GAAGGATCTGGCGACGGTCAAAGTGGATTGGGCGATGCGCTACGGCACGCCGTCGATCGCCTCGCGCATCGAGGCGTTGA AGCAAGAGGGCTGCGACCGTATCGTGCTCTTCCCGCTTTATCCGCAATATGCGGCGGCAACGACCGCCACCGTCAACGAC AAGGCGTTCCAGAAGCTGCTTTCAATGCGCTGGCAGCCGGCATTACGCACCGTGCCCGACTATCACGACGACGAGACCTA TATCGAAGCGCTCGCAACGTCCGTCGAAAAGCATCTTGCGACGCTCGACTGGAAGCCGGAGATGCTGCTCGCCTCCTTCC ACGGCATTCCGATGTCCTATTTCAAGCAGGGCGATCCCTATTACTGTCAATGCCAGAAGACCGGCCGGCTGCTGCGCGAG CGGCTGGGGCTGACCAAGGAAAACTTCATGGTCACTTTCCAGTCCCGCTTCGGGCCGGAGGAATGGCTGCAGCCCTATAC CGACAAGACGGTGGAGAAGCTCGCCCAAGACGGCGTCAAGCGCATCGCCGTCATCAATCCCGGCTTCGTTTCCGACTGTC TGGAAACGCTTGAGGAGATCGCCGAACAGGCCGCCCATTCATTCCACGAGAATGGCGGCGAGAAGTTCGCGCATATTCCC TGCCTCAACGACGGCGAGGACGGCATGACGGTGCTGGAAAAGGTCGTCCGCCGCGAATTGCAGGGCTGGATCTAA
Upstream 100 bases:
>100_bases CCGGCCCGGGCTTTCCCGGGCCGGCTTTTCTTTCTATAGGGTGAACCACGATCTCGGGGCTGCGTATGAGCCGACGAGAC AAAAGAGCATTGGGACCAGA
Downstream 100 bases:
>100_bases GAGATTCCACGCTGAAAAATCTGCCCTGACTCATCCTTCCTTTCCTAGGAGGTGGGGCATCCGTGGGTCATTTCTTCCTC GCAAAGAACATGCTACCTCA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTADTSLRPADHPAVKSGKVGVLLVNLGTPDGTDYTSMRRYLREFLTDRRVIEWSPWKWYPILFGVVLNTRPRKVGKAYE LIWNKEKNESYLRTYTRNQSELMAEHLKDLATVKVDWAMRYGTPSIASRIEALKQEGCDRIVLFPLYPQYAAATTATVND KAFQKLLSMRWQPALRTVPDYHDDETYIEALATSVEKHLATLDWKPEMLLASFHGIPMSYFKQGDPYYCQCQKTGRLLRE RLGLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEIAEQAAHSFHENGGEKFAHIP CLNDGEDGMTVLEKVVRRELQGWI
Sequences:
>Translated_344_residues MTADTSLRPADHPAVKSGKVGVLLVNLGTPDGTDYTSMRRYLREFLTDRRVIEWSPWKWYPILFGVVLNTRPRKVGKAYE LIWNKEKNESYLRTYTRNQSELMAEHLKDLATVKVDWAMRYGTPSIASRIEALKQEGCDRIVLFPLYPQYAAATTATVND KAFQKLLSMRWQPALRTVPDYHDDETYIEALATSVEKHLATLDWKPEMLLASFHGIPMSYFKQGDPYYCQCQKTGRLLRE RLGLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEIAEQAAHSFHENGGEKFAHIP CLNDGEDGMTVLEKVVRRELQGWI >Mature_343_residues TADTSLRPADHPAVKSGKVGVLLVNLGTPDGTDYTSMRRYLREFLTDRRVIEWSPWKWYPILFGVVLNTRPRKVGKAYEL IWNKEKNESYLRTYTRNQSELMAEHLKDLATVKVDWAMRYGTPSIASRIEALKQEGCDRIVLFPLYPQYAAATTATVNDK AFQKLLSMRWQPALRTVPDYHDDETYIEALATSVEKHLATLDWKPEMLLASFHGIPMSYFKQGDPYYCQCQKTGRLLRER LGLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEIAEQAAHSFHENGGEKFAHIPC LNDGEDGMTVLEKVVRRELQGWI
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499021, Length=347, Percent_Identity=25.6484149855908, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI60499025, Length=340, Percent_Identity=25.5882352941176, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1786681, Length=322, Percent_Identity=42.2360248447205, Blast_Score=248, Evalue=5e-67, Organism=Saccharomyces cerevisiae, GI6324750, Length=343, Percent_Identity=23.9067055393586, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI17864156, Length=340, Percent_Identity=24.7058823529412, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24651774, Length=269, Percent_Identity=24.5353159851301, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 39550; Mature: 39418
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADTSLRPADHPAVKSGKVGVLLVNLGTPDGTDYTSMRRYLREFLTDRRVIEWSPWKWY CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHH PILFGVVLNTRPRKVGKAYELIWNKEKNESYLRTYTRNQSELMAEHLKDLATVKVDWAMR HHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHHC YGTPSIASRIEALKQEGCDRIVLFPLYPQYAAATTATVNDKAFQKLLSMRWQPALRTVPD CCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCC YHDDETYIEALATSVEKHLATLDWKPEMLLASFHGIPMSYFKQGDPYYCQCQKTGRLLRE CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHH RLGLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEI HHCCCHHHEEEEEHHHCCCHHHHCCCCHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHH AEQAAHSFHENGGEKFAHIPCLNDGEDGMTVLEKVVRRELQGWI HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TADTSLRPADHPAVKSGKVGVLLVNLGTPDGTDYTSMRRYLREFLTDRRVIEWSPWKWY CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCHH PILFGVVLNTRPRKVGKAYELIWNKEKNESYLRTYTRNQSELMAEHLKDLATVKVDWAMR HHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHEEEEHHHC YGTPSIASRIEALKQEGCDRIVLFPLYPQYAAATTATVNDKAFQKLLSMRWQPALRTVPD CCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCHHHHHHHHHHCCCCHHHCCCC YHDDETYIEALATSVEKHLATLDWKPEMLLASFHGIPMSYFKQGDPYYCQCQKTGRLLRE CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEHHHHHHHHH RLGLTKENFMVTFQSRFGPEEWLQPYTDKTVEKLAQDGVKRIAVINPGFVSDCLETLEEI HHCCCHHHEEEEEHHHCCCHHHHCCCCHHHHHHHHHCCHHEEEEECCCHHHHHHHHHHHH AEQAAHSFHENGGEKFAHIPCLNDGEDGMTVLEKVVRRELQGWI HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA