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The map label for this gene is podJ [H]

Identifier: 209550844

GI number: 209550844

Start: 3359994

End: 3361076

Strand: Reverse

Name: podJ [H]

Synonym: Rleg2_3268

Alternate gene names: 209550844

Gene position: 3361076-3359994 (Counterclockwise)

Preceding gene: 209550845

Following gene: 209550842

Centisome position: 74.07

GC content: 64.64

Gene sequence:

>1083_bases
ATGCCGATCCCCACCGCCCGCCCGTTGAAATTTATCCTTGCCAGCATGGCCGCCTTCGTTGCGGCCGGACCGGCTGTCGT
CTTGGCGCAGGCCACCGACAGCGTCATCAGCCAGCCGGGCTCGGCCCCGGCCTCGACCTTCCGCACCGACCGGCCTTCCG
CTCCGGGTGTGCGGCCCTCCGATGGTGTCGGCGTGTTCGACCGCATGGGTGCGAAGCTGCCGGACCTGCCGCCGGAGAAG
GATTACAAGGGACCTGTCGACGAGGCTTACGGCGCCTTCCAGCGCGGTTATTACCTGACGGCAATGGACAAGGCGCTGCC
GCGCGCTCAACTCGGCGATGCAGCGGCGCAGACGCTGATCGGCGAAATCCTCTCGCAGGGGCTTGGTGTCAAGAAGGACG
TCAAGAACGCCGCCTTCTGGTACGGCAAGGCGGCCGAAGGCGGCGATGCGGCGGCAATGTTCAAATATGCGCTGATCCTG
ATGGAAGGCCAGGGTGTGCCGCGCGACAAGGTCAAGGCCGACGACTACATGCGCAAGGCGGCCGAGGCCGGCAATCCTTC
GGCGGAATTCAACTGGGCGCAGCTTGTCATCGCCGATCATCCCGGCGATACGGGACTGAAGCTCGCGCTGCCATTCTACG
AGAAATCGGCCGAGCAGGGCATTGCCGATTCGCAATATGCCGTGGCGCAGATCTATGCGACGCTGAAGGACTTGCCTGAG
GAAAAGAAGCAGCTCGCCCGCGAGTGGATGGCACGTGCGGCGCGCGCCGGTTTCGACACGGCCCAGCTCGATCTCGGCAT
CTGGCTCGTCAACGGCGTCGGCGGGCCGAAGGATTACGTCAAGGGCTTCGAATGGCTGAAGCTTGCCGCCAATGGCGGCA
ATGTCGTCGCTCAGAACAAGCTCGCCCACCTTTATATCAATGCCATCGGCACGGCGCCCAACCCGGTCGAGGCGGCGAAG
TGGTACGTCCTGTCGCGCCGGGCGGGGCTCGCCGATCCGTCGCTCGAGGATTTCTATCTCGGCATCGAGGACGATCAGCA
GAAGGCGGCGATCGAGGCCGCCAACAAGTTCCGGCGGCGATAA

Upstream 100 bases:

>100_bases
GCTGTCTTCGGCGAGCCCAACCGGGCGCCGTCTATCGTCGCCGAAGTCAACGCTTTGCTTGACGAAAAAGCGCCACGGTT
TGAGGATTGAAATCGCGCTC

Downstream 100 bases:

>100_bases
ATTACGGCGTCCTTTGCGGGTCCCAACCGAGAACGATTTTAAAACAGCGCGTCGGCGAAAAGATCCTCGTCGTTTTCGGC
TTTGACGGTCTCGGCGGGCG

Product: Sel1 domain-containing protein repeat-containing protein

Products: NA

Alternate protein names: Polar organelle development protein [H]

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MPIPTARPLKFILASMAAFVAAGPAVVLAQATDSVISQPGSAPASTFRTDRPSAPGVRPSDGVGVFDRMGAKLPDLPPEK
DYKGPVDEAYGAFQRGYYLTAMDKALPRAQLGDAAAQTLIGEILSQGLGVKKDVKNAAFWYGKAAEGGDAAAMFKYALIL
MEGQGVPRDKVKADDYMRKAAEAGNPSAEFNWAQLVIADHPGDTGLKLALPFYEKSAEQGIADSQYAVAQIYATLKDLPE
EKKQLAREWMARAARAGFDTAQLDLGIWLVNGVGGPKDYVKGFEWLKLAANGGNVVAQNKLAHLYINAIGTAPNPVEAAK
WYVLSRRAGLADPSLEDFYLGIEDDQQKAAIEAANKFRRR

Sequences:

>Translated_360_residues
MPIPTARPLKFILASMAAFVAAGPAVVLAQATDSVISQPGSAPASTFRTDRPSAPGVRPSDGVGVFDRMGAKLPDLPPEK
DYKGPVDEAYGAFQRGYYLTAMDKALPRAQLGDAAAQTLIGEILSQGLGVKKDVKNAAFWYGKAAEGGDAAAMFKYALIL
MEGQGVPRDKVKADDYMRKAAEAGNPSAEFNWAQLVIADHPGDTGLKLALPFYEKSAEQGIADSQYAVAQIYATLKDLPE
EKKQLAREWMARAARAGFDTAQLDLGIWLVNGVGGPKDYVKGFEWLKLAANGGNVVAQNKLAHLYINAIGTAPNPVEAAK
WYVLSRRAGLADPSLEDFYLGIEDDQQKAAIEAANKFRRR
>Mature_359_residues
PIPTARPLKFILASMAAFVAAGPAVVLAQATDSVISQPGSAPASTFRTDRPSAPGVRPSDGVGVFDRMGAKLPDLPPEKD
YKGPVDEAYGAFQRGYYLTAMDKALPRAQLGDAAAQTLIGEILSQGLGVKKDVKNAAFWYGKAAEGGDAAAMFKYALILM
EGQGVPRDKVKADDYMRKAAEAGNPSAEFNWAQLVIADHPGDTGLKLALPFYEKSAEQGIADSQYAVAQIYATLKDLPEE
KKQLAREWMARAARAGFDTAQLDLGIWLVNGVGGPKDYVKGFEWLKLAANGGNVVAQNKLAHLYINAIGTAPNPVEAAKW
YVLSRRAGLADPSLEDFYLGIEDDQQKAAIEAANKFRRR

Specific function: PodJL provides the positional information for the localization of several polar organelles (pili, adhesive holdfast and chemotactic apparatus) by recruiting structural (CpaE) and regulatory (PleC) proteins to a specific cell pole [H]

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein. Note=Both PodJL and podJS localize to the swarmer pole at different stages of the cell division [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

Organism=Homo sapiens, GI154689719, Length=258, Percent_Identity=28.6821705426357, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI19923669, Length=241, Percent_Identity=25.3112033195021, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87081769, Length=232, Percent_Identity=30.1724137931034, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002477
- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01471 PG_binding_1; PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 38620; Mature: 38489

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPTARPLKFILASMAAFVAAGPAVVLAQATDSVISQPGSAPASTFRTDRPSAPGVRPS
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC
DGVGVFDRMGAKLPDLPPEKDYKGPVDEAYGAFQRGYYLTAMDKALPRAQLGDAAAQTLI
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHCCHHHHHHHHHHHHH
GEILSQGLGVKKDVKNAAFWYGKAAEGGDAAAMFKYALILMEGQGVPRDKVKADDYMRKA
HHHHHCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHEECCCCCCHHHCCHHHHHHHH
AEAGNPSAEFNWAQLVIADHPGDTGLKLALPFYEKSAEQGIADSQYAVAQIYATLKDLPE
HHCCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCHH
EKKQLAREWMARAARAGFDTAQLDLGIWLVNGVGGPKDYVKGFEWLKLAANGGNVVAQNK
HHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCHHHHCCCCEEEEECCCCCEEECCC
LAHLYINAIGTAPNPVEAAKWYVLSRRAGLADPSLEDFYLGIEDDQQKAAIEAANKFRRR
EEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIPTARPLKFILASMAAFVAAGPAVVLAQATDSVISQPGSAPASTFRTDRPSAPGVRPS
CCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCC
DGVGVFDRMGAKLPDLPPEKDYKGPVDEAYGAFQRGYYLTAMDKALPRAQLGDAAAQTLI
CCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHCCHHHHHHHHHHHHH
GEILSQGLGVKKDVKNAAFWYGKAAEGGDAAAMFKYALILMEGQGVPRDKVKADDYMRKA
HHHHHCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHEECCCCCCHHHCCHHHHHHHH
AEAGNPSAEFNWAQLVIADHPGDTGLKLALPFYEKSAEQGIADSQYAVAQIYATLKDLPE
HHCCCCCCCCCEEEEEEEECCCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHCHH
EKKQLAREWMARAARAGFDTAQLDLGIWLVNGVGGPKDYVKGFEWLKLAANGGNVVAQNK
HHHHHHHHHHHHHHHCCCCHHEEEEEEEEEECCCCCHHHHCCCCEEEEECCCCCEEECCC
LAHLYINAIGTAPNPVEAAKWYVLSRRAGLADPSLEDFYLGIEDDQQKAAIEAANKFRRR
EEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHEEECCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12370432 [H]