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The map label for this gene is yddE [C]

Identifier: 209550819

GI number: 209550819

Start: 3333465

End: 3334388

Strand: Direct

Name: yddE [C]

Synonym: Rleg2_3243

Alternate gene names: 209550819

Gene position: 3333465-3334388 (Clockwise)

Preceding gene: 209550818

Following gene: 209550821

Centisome position: 73.46

GC content: 62.66

Gene sequence:

>924_bases
ATGGACACCCTCTCCTACGTCACCGTCGATGTCTTCACCTCCACCCGCTTCGAGGGCAATCCGCTTGCCGTCATCGCCGA
TGCGCGGGGCCTGAGCGATGGGGCGATGCAGAGGATCGCCACCGAGTTCAACTATTCCGAAGTCACCTTCGTCCTGCCGC
CGGAAAGTCCTGAAAATTCCGCCCGCGTCCGCATCTTCACCCCGACGATGGAAGTGCCCTTCGCCGGCCATCCGAATGTC
GGCACCACCTATGTGCTCGGCCAGCAGGCGGAGATCTTCGGCAAGCCGGTCGGCGAGAAATTGCGCTTCGAGGAAAAGGC
CGGCATCGTCGAAGTCAGCCTGAAACGCAACGGCGCAAGGGTTGCGGCAACAGCCATCCGCGCACCGCAGCCGCTGACGG
TCGGCGATACCATCGCCGAGGAAACCATCGCCCGCTGCATCGGGCTCGAACCCAGCGTCATCGTCAAAACCACCCATGCC
CCGGTCTTTGCCTCGGTGGGCCTGAATTTCGCAGTGGCCGAAGTGAGCGGGCTTGAAGCGCTGGCCGCTGCCCGCCCGAA
CCTTGCCGGTTTCCAGGCGGCTGCCGGCCGCCAGACGACGAGCGGCCATGACTTCTCGCTCTTCGTCTATGCCAGAACAT
CCGAAAATCCGTGGCATATTCGCGCCCGCATGTTCGCACCGCTCGACAACGTGCCCGAGGATCCGGCAACCGGCAGCGCT
TCAGCGGCGCTTGGCGCCTATCTCGTCTCGCTTGCGCCTGATGCGGATATGAACGTCCGCATCACCGTTGAACAGGGCGT
CGAAATGGGCCGGCGCAGCATCATCGCCCTCGATGTCGTGAAGTCCAATGGCATCGTTACAGATGTCATCATCTCTGGAA
GCTGCGTTGCCGTCATGCGCGGGGAAATCATCCTCCAGGACTGA

Upstream 100 bases:

>100_bases
TTAAAACCCCTACTACTCCCATTGTCACGGCGACAAGAAACCGGCTCGCCTCGCCGGAAGATCGTGATTATCCATAGCCG
CACCCGCAACAGGAGCCGCC

Downstream 100 bases:

>100_bases
CGATCGCAGGCCGACGACAGGCCTACATCAGGAAATCGCGCAACAGCAGGTCCAGTGCCCAGATCCCGAAAGCGATCAGC
GCGATCTTCCAGAAATCCGT

Product: phenazine biosynthesis protein PhzF family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MDTLSYVTVDVFTSTRFEGNPLAVIADARGLSDGAMQRIATEFNYSEVTFVLPPESPENSARVRIFTPTMEVPFAGHPNV
GTTYVLGQQAEIFGKPVGEKLRFEEKAGIVEVSLKRNGARVAATAIRAPQPLTVGDTIAEETIARCIGLEPSVIVKTTHA
PVFASVGLNFAVAEVSGLEALAAARPNLAGFQAAAGRQTTSGHDFSLFVYARTSENPWHIRARMFAPLDNVPEDPATGSA
SAALGAYLVSLAPDADMNVRITVEQGVEMGRRSIIALDVVKSNGIVTDVIISGSCVAVMRGEIILQD

Sequences:

>Translated_307_residues
MDTLSYVTVDVFTSTRFEGNPLAVIADARGLSDGAMQRIATEFNYSEVTFVLPPESPENSARVRIFTPTMEVPFAGHPNV
GTTYVLGQQAEIFGKPVGEKLRFEEKAGIVEVSLKRNGARVAATAIRAPQPLTVGDTIAEETIARCIGLEPSVIVKTTHA
PVFASVGLNFAVAEVSGLEALAAARPNLAGFQAAAGRQTTSGHDFSLFVYARTSENPWHIRARMFAPLDNVPEDPATGSA
SAALGAYLVSLAPDADMNVRITVEQGVEMGRRSIIALDVVKSNGIVTDVIISGSCVAVMRGEIILQD
>Mature_307_residues
MDTLSYVTVDVFTSTRFEGNPLAVIADARGLSDGAMQRIATEFNYSEVTFVLPPESPENSARVRIFTPTMEVPFAGHPNV
GTTYVLGQQAEIFGKPVGEKLRFEEKAGIVEVSLKRNGARVAATAIRAPQPLTVGDTIAEETIARCIGLEPSVIVKTTHA
PVFASVGLNFAVAEVSGLEALAAARPNLAGFQAAAGRQTTSGHDFSLFVYARTSENPWHIRARMFAPLDNVPEDPATGSA
SAALGAYLVSLAPDADMNVRITVEQGVEMGRRSIIALDVVKSNGIVTDVIISGSCVAVMRGEIILQD

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=324, Percent_Identity=29.0123456790123, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6321818, Length=306, Percent_Identity=30.0653594771242, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 32589; Mature: 32589

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLSYVTVDVFTSTRFEGNPLAVIADARGLSDGAMQRIATEFNYSEVTFVLPPESPENS
CCCCEEEEEEEEEECEECCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC
ARVRIFTPTMEVPFAGHPNVGTTYVLGQQAEIFGKPVGEKLRFEEKAGIVEVSLKRNGAR
CEEEEEECCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHCCCCCCCEEEEEEECCCCE
VAATAIRAPQPLTVGDTIAEETIARCIGLEPSVIVKTTHAPVFASVGLNFAVAEVSGLEA
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCHHH
LAAARPNLAGFQAAAGRQTTSGHDFSLFVYARTSENPWHIRARMFAPLDNVPEDPATGSA
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
SAALGAYLVSLAPDADMNVRITVEQGVEMGRRSIIALDVVKSNGIVTDVIISGSCVAVMR
HHHHHHHHEEECCCCCCEEEEEEHHCHHCCCCEEEEEEEEECCCEEEEEEECCCEEEEEE
GEIILQD
CEEEEEC
>Mature Secondary Structure
MDTLSYVTVDVFTSTRFEGNPLAVIADARGLSDGAMQRIATEFNYSEVTFVLPPESPENS
CCCCEEEEEEEEEECEECCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCC
ARVRIFTPTMEVPFAGHPNVGTTYVLGQQAEIFGKPVGEKLRFEEKAGIVEVSLKRNGAR
CEEEEEECCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHCCCCCCCEEEEEEECCCCE
VAATAIRAPQPLTVGDTIAEETIARCIGLEPSVIVKTTHAPVFASVGLNFAVAEVSGLEA
EEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCEEEEEECCCHHH
LAAARPNLAGFQAAAGRQTTSGHDFSLFVYARTSENPWHIRARMFAPLDNVPEDPATGSA
HHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCC
SAALGAYLVSLAPDADMNVRITVEQGVEMGRRSIIALDVVKSNGIVTDVIISGSCVAVMR
HHHHHHHHEEECCCCCCEEEEEEHHCHHCCCCEEEEEEEEECCCEEEEEEECCCEEEEEE
GEIILQD
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]