| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pgk [H]
Identifier: 209550817
GI number: 209550817
Start: 3330562
End: 3331764
Strand: Direct
Name: pgk [H]
Synonym: Rleg2_3241
Alternate gene names: 209550817
Gene position: 3330562-3331764 (Clockwise)
Preceding gene: 209550816
Following gene: 209550818
Centisome position: 73.39
GC content: 64.42
Gene sequence:
>1203_bases ATGCCTTCCTTCAAGACCCTCGACGATCTTTCCGACATCCGCGGCAAGCGCGTTCTCGTCCGCGTCGATCTCAACGTCCC GGTCAAGGACGGCAAGGTCACCGATACGACCCGCATCGAGCGTGTGGCGCCGACGATCCTCGAATTGTCCGAAAAGGGCG CCAAGGTCATCCTGCTGGCCCATTTCGGCCGGCCGAAGGACGGCCCTTCGCCTGAACTGTCGCTGTCGCTGATCGCCCCT TCCGTCGAGGAAGTACTGGATCATGCCGTGTCGACCGCCTCCGACTGCATCGGCGAGGCCGCCGCCTCCGCCGTCGCCGC GATGAATGACGGCGATATCCTGCTTCTGGAAAACACCCGCTTCCACAAGGGCGAGGAAAAGAACGATCCCGACTTCACCA AGGCGCTTGCCGCCAACGGCGACATCTATGTCAATGACGCCTTCTCCGCCGCCCACCGCGCCCATGCCTCGACCGAGGGG CTTGCCCACCATCTGCCGGCCTATGCCGGCCGCACCATGCAGGCCGAGCTGGAAGCACTGGAAAAGGGTCTGGGTGATCC CGCCCGCCCGGTCGTCGCAATTGTCGGCGGCGCCAAGGTCTCGACCAAGATCGACCTGCTGATGAACCTGGTGAAAAAAG TCGATGCGCTGGTCATCGGCGGCGGCATGGCCAATACCTTCATCGCCGCCCGCGGCACCAATGTCGGCAAATCGCTCTGC GAGCATGATCTTGCCGAAACCGCCAGGCAGATCATGATCGAGGCCGCGACATCGGGCTGCGCCATCATCCTGCCGGAAGA CGGCGTGATTGCCCGCGAGTTCAAGGCGGGTGCCGCCAACGAGACGGTCGATATCGACGCCATTCCCGCCGATGCCATGG TGCTCGATGTCGGCCCGAAATCCGTCCAGGCCATCAGCGCCTGGATCGAGCGCGCTTCGACCCTCGTCTGGAACGGCCCG CTCGGCGCCTTCGAGATCGAGCCCTTCGATGCCGCAACCGTCGGCGCTGCGAAATACGCAGCCGAGCGCACCACAGCCGG CAAGCTCACCTCCGTTGCCGGCGGCGGCGACACGGTTTCTGCGCTGAACCACGCCGGTGTTGCCGACGATTTCACCTATG TCTCCACGGCCGGCGGCGCTTTCCTCGAATGGATGGAAGGCAAGGAGCTTCCCGGCGTCGCCGTCCTCAACGCCGCTCGG TAA
Upstream 100 bases:
>100_bases CGACGAAGGCACACACGAAAACGGTCGCTGAACGCCTTGCGTCTCGAATGATCCTTGCTATGGTCGGCGCAATTTCCGCC AACCAAGACTGGATCTCCCC
Downstream 100 bases:
>100_bases CTGCCTCATGCATCGGCCTGACAATCGGGCCGATGCATCCGTTTAAAATGTTGGCAGCCTCCTTTGCGCAGGCAAAAGGC GCGCGGCGCGGCAAGCCCGA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MPSFKTLDDLSDIRGKRVLVRVDLNVPVKDGKVTDTTRIERVAPTILELSEKGAKVILLAHFGRPKDGPSPELSLSLIAP SVEEVLDHAVSTASDCIGEAAASAVAAMNDGDILLLENTRFHKGEEKNDPDFTKALAANGDIYVNDAFSAAHRAHASTEG LAHHLPAYAGRTMQAELEALEKGLGDPARPVVAIVGGAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLC EHDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPKSVQAISAWIERASTLVWNGP LGAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVSALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAAR
Sequences:
>Translated_400_residues MPSFKTLDDLSDIRGKRVLVRVDLNVPVKDGKVTDTTRIERVAPTILELSEKGAKVILLAHFGRPKDGPSPELSLSLIAP SVEEVLDHAVSTASDCIGEAAASAVAAMNDGDILLLENTRFHKGEEKNDPDFTKALAANGDIYVNDAFSAAHRAHASTEG LAHHLPAYAGRTMQAELEALEKGLGDPARPVVAIVGGAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLC EHDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPKSVQAISAWIERASTLVWNGP LGAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVSALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAAR >Mature_399_residues PSFKTLDDLSDIRGKRVLVRVDLNVPVKDGKVTDTTRIERVAPTILELSEKGAKVILLAHFGRPKDGPSPELSLSLIAPS VEEVLDHAVSTASDCIGEAAASAVAAMNDGDILLLENTRFHKGEEKNDPDFTKALAANGDIYVNDAFSAAHRAHASTEGL AHHLPAYAGRTMQAELEALEKGLGDPARPVVAIVGGAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLCE HDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPKSVQAISAWIERASTLVWNGPL GAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVSALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAAR
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=412, Percent_Identity=40.0485436893204, Blast_Score=268, Evalue=5e-72, Organism=Homo sapiens, GI31543397, Length=412, Percent_Identity=40.0485436893204, Blast_Score=263, Evalue=3e-70, Organism=Escherichia coli, GI1789294, Length=387, Percent_Identity=44.1860465116279, Blast_Score=302, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17508823, Length=410, Percent_Identity=41.7073170731707, Blast_Score=289, Evalue=2e-78, Organism=Saccharomyces cerevisiae, GI6319857, Length=413, Percent_Identity=40.4358353510896, Blast_Score=271, Evalue=9e-74, Organism=Drosophila melanogaster, GI24581203, Length=407, Percent_Identity=41.5233415233415, Blast_Score=268, Evalue=5e-72, Organism=Drosophila melanogaster, GI17136394, Length=406, Percent_Identity=39.4088669950739, Blast_Score=253, Evalue=2e-67,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41652; Mature: 41520
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFKTLDDLSDIRGKRVLVRVDLNVPVKDGKVTDTTRIERVAPTILELSEKGAKVILLA CCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE HFGRPKDGPSPELSLSLIAPSVEEVLDHAVSTASDCIGEAAASAVAAMNDGDILLLENTR ECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCC FHKGEEKNDPDFTKALAANGDIYVNDAFSAAHRAHASTEGLAHHLPAYAGRTMQAELEAL CCCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH EKGLGDPARPVVAIVGGAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLC HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCHHHEEEECCCHHHHHHH EHDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPK HHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHCCCCCCCEEEEECCCCCEEEEECCCH SVQAISAWIERASTLVWNGPLGAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVS HHHHHHHHHHHHCEEEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHH ALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAAR HHHCCCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEECCC >Mature Secondary Structure PSFKTLDDLSDIRGKRVLVRVDLNVPVKDGKVTDTTRIERVAPTILELSEKGAKVILLA CCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE HFGRPKDGPSPELSLSLIAPSVEEVLDHAVSTASDCIGEAAASAVAAMNDGDILLLENTR ECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCC FHKGEEKNDPDFTKALAANGDIYVNDAFSAAHRAHASTEGLAHHLPAYAGRTMQAELEAL CCCCCCCCCCHHHHHHHCCCCEEEECHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHH EKGLGDPARPVVAIVGGAKVSTKIDLLMNLVKKVDALVIGGGMANTFIAARGTNVGKSLC HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEEECCCCHHHEEEECCCHHHHHHH EHDLAETARQIMIEAATSGCAIILPEDGVIAREFKAGAANETVDIDAIPADAMVLDVGPK HHHHHHHHHHHHHHCCCCCCEEEECCCCEEEHHHCCCCCCCEEEEECCCCCEEEEECCCH SVQAISAWIERASTLVWNGPLGAFEIEPFDAATVGAAKYAAERTTAGKLTSVAGGGDTVS HHHHHHHHHHHHCEEEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHH ALNHAGVADDFTYVSTAGGAFLEWMEGKELPGVAVLNAAR HHHCCCCCCCCCEEECCCCHHHHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA