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The map label for this gene is ugpA [H]

Identifier: 209550694

GI number: 209550694

Start: 3186653

End: 3187537

Strand: Reverse

Name: ugpA [H]

Synonym: Rleg2_3118

Alternate gene names: 209550694

Gene position: 3187537-3186653 (Counterclockwise)

Preceding gene: 209550695

Following gene: 209550693

Centisome position: 70.24

GC content: 59.77

Gene sequence:

>885_bases
ATGGAAAAGCGCGTCACTTTCTCCTCGACGACGATCGGACTGCTCTTCGCATTTCCGATGCTGCTGCTGATCTTCGTCTT
CTTCTATTGGCCGAGTGCGCAGGCGCTCTATTGGGCGTTCACGCTCGAGCAGCCATGGGGCGGCGGCAACGCCTGGGTCG
GATTCGACAATTTCAAGCAATTGCTCAGCGACCCCATCTATTGGGAGTCGATCACCCGCAGCATGATCTTCGGCTTCAGC
TCGACGGCCATTGCCATGGGGATGGCGCTCATCCTGGCGCTGTTGACGGATCGTGAGCTGCGCGGCCACAAAATCTACCG
GTCGGTCTTCATCTGGCCTTATGCGATTGCCGCGCCGGCCCTCGGTCTCGCCTTCCGCTTCATCCTGGCGCCGGAGGCCG
GCCTGCTGTCGGTCATCAATCATGTCTGGCCCGGTCTCTGGAACCCGGCGCTCGACGGCAAGGACGCGATGATTGCCGTC
ATCATCGCCTTTTCCTGGAAATATATCGGCTATAATTTCATCTTCTTCCTTTCCGCACTTCAGGGCATTCCGCGCTCGCT
GATCGAGGCCGCCGCCATGGACGGCTCCGGGCCGCTGCGCCGCATGTGGGACCTCCAGCTGCCGCTGCTGACGCCGACCT
TGTTTTTCCTACTCGTCATCAACATTACCGAAAGCTTCCAGGATTCTTTCGGCATCGTCGACGTCATGACGCAGGGCGGG
CCGGCGCGCGCGACCGAACTCATGGTCTACAAGATCTATTTCGACGGTTTCAGGGGGCTCGATTATTCCGGCGCCGCCGC
CCAGTCGATCATCCTGATGGCGCTCGTCGTTCTTCTCACCATCTTCCAGTTCCGCTTCATCGAGCGGCGCGTGCACTACA
AGTGA

Upstream 100 bases:

>100_bases
GCGCTGCGCGCGCCGGGTGCGTCTTTGTAAGCTCTCTTAATCGGTCGCGGATGCGAAGTGTCGCCCGCGCCTAACCAAAC
CATGGCGAAAACGACCACTC

Downstream 100 bases:

>100_bases
GGTCGCGGATATGATCGAACGCACGCCGATATTCAACTTCATCTGCTATACGCTTCTGGCGCTCGGCATGGTGATCGCGC
TTCTGCCTTTCGTCATCGTC

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MEKRVTFSSTTIGLLFAFPMLLLIFVFFYWPSAQALYWAFTLEQPWGGGNAWVGFDNFKQLLSDPIYWESITRSMIFGFS
STAIAMGMALILALLTDRELRGHKIYRSVFIWPYAIAAPALGLAFRFILAPEAGLLSVINHVWPGLWNPALDGKDAMIAV
IIAFSWKYIGYNFIFFLSALQGIPRSLIEAAAMDGSGPLRRMWDLQLPLLTPTLFFLLVINITESFQDSFGIVDVMTQGG
PARATELMVYKIYFDGFRGLDYSGAAAQSIILMALVVLLTIFQFRFIERRVHYK

Sequences:

>Translated_294_residues
MEKRVTFSSTTIGLLFAFPMLLLIFVFFYWPSAQALYWAFTLEQPWGGGNAWVGFDNFKQLLSDPIYWESITRSMIFGFS
STAIAMGMALILALLTDRELRGHKIYRSVFIWPYAIAAPALGLAFRFILAPEAGLLSVINHVWPGLWNPALDGKDAMIAV
IIAFSWKYIGYNFIFFLSALQGIPRSLIEAAAMDGSGPLRRMWDLQLPLLTPTLFFLLVINITESFQDSFGIVDVMTQGG
PARATELMVYKIYFDGFRGLDYSGAAAQSIILMALVVLLTIFQFRFIERRVHYK
>Mature_294_residues
MEKRVTFSSTTIGLLFAFPMLLLIFVFFYWPSAQALYWAFTLEQPWGGGNAWVGFDNFKQLLSDPIYWESITRSMIFGFS
STAIAMGMALILALLTDRELRGHKIYRSVFIWPYAIAAPALGLAFRFILAPEAGLLSVINHVWPGLWNPALDGKDAMIAV
IIAFSWKYIGYNFIFFLSALQGIPRSLIEAAAMDGSGPLRRMWDLQLPLLTPTLFFLLVINITESFQDSFGIVDVMTQGG
PARATELMVYKIYFDGFRGLDYSGAAAQSIILMALVVLLTIFQFRFIERRVHYK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=293, Percent_Identity=40.2730375426621, Blast_Score=225, Evalue=2e-60,
Organism=Escherichia coli, GI1790465, Length=288, Percent_Identity=28.8194444444444, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=28.9915966386555, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33226; Mature: 33226

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVTFSSTTIGLLFAFPMLLLIFVFFYWPSAQALYWAFTLEQPWGGGNAWVGFDNFKQ
CCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECHHHHHH
LLSDPIYWESITRSMIFGFSSTAIAMGMALILALLTDRELRGHKIYRSVFIWPYAIAAPA
HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGLAFRFILAPEAGLLSVINHVWPGLWNPALDGKDAMIAVIIAFSWKYIGYNFIFFLSAL
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIPRSLIEAAAMDGSGPLRRMWDLQLPLLTPTLFFLLVINITESFQDSFGIVDVMTQGG
HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PARATELMVYKIYFDGFRGLDYSGAAAQSIILMALVVLLTIFQFRFIERRVHYK
CCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKRVTFSSTTIGLLFAFPMLLLIFVFFYWPSAQALYWAFTLEQPWGGGNAWVGFDNFKQ
CCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECHHHHHH
LLSDPIYWESITRSMIFGFSSTAIAMGMALILALLTDRELRGHKIYRSVFIWPYAIAAPA
HHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LGLAFRFILAPEAGLLSVINHVWPGLWNPALDGKDAMIAVIIAFSWKYIGYNFIFFLSAL
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QGIPRSLIEAAAMDGSGPLRRMWDLQLPLLTPTLFFLLVINITESFQDSFGIVDVMTQGG
HHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PARATELMVYKIYFDGFRGLDYSGAAAQSIILMALVVLLTIFQFRFIERRVHYK
CCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]