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The map label for this gene is amiC [H]

Identifier: 209550639

GI number: 209550639

Start: 3121839

End: 3123131

Strand: Reverse

Name: amiC [H]

Synonym: Rleg2_3063

Alternate gene names: 209550639

Gene position: 3123131-3121839 (Counterclockwise)

Preceding gene: 209550640

Following gene: 209550638

Centisome position: 68.82

GC content: 58.7

Gene sequence:

>1293_bases
ATGAATCTCAGATCCACGATCACCGGCGCTGCGCTCGGTGCCGTCATGGCGGCATCGGCCGCCTTCCAGGGCGCGCTTGC
CGCCGACGACACGATCAAAGTCGGAATATTGCATTCGCTTTCCGGCACGATGGCGATTTCCGAAACCACGCTGAAAGACG
CCATGTTGATGCTCATCGACGAGCAGAACAAGAAGGGCGGCCTTCTCGGCAAGAAGCTCGAAGCCGTCGTCGTCGATCCG
GCTTCCGACTGGCCGCTGTTTGCCGAAAAGGCTCGCGAGCTGATCCAGAAGGACAAGGTTGCCGCCGTCTTCGGTTGCTG
GACGTCCTCGTCGCGCAAGTCCGTTCTGCCGGTATTCGAGGAGCTGAATTCGCTGCTCTTCTACCCCGTGCAGTATGAAG
GCGAAGAATCCTCGCGCAACATCTTCTACACCGGTGCTGCTCCGAACCAGCAGGCCATTCCGGCCGTCGACTACCTGATG
GAAAAGGAAGGCGTCAAGCGCTTCGTTCTTGAAGGGACCGACTACGTCTATCCGCGCACCACAAACAAGATTCTCGAGGC
GTACCTGATTTCGAAGGGTATTCCGAAAGAAGATATCATGACCAACTACACGCCGTTCGGCTTCTCCGACTGGCAGACCG
AAGTTTCCAAGATCAAGGAATTCGGTTCGGCCGGCAAGAAGACCGCCGTCGTCTCGACGATCAACGGCGACGCCAACGTT
CCGTTCTACAAGGAACTGGGCAACAAGGGCATCAAGGCAACCGACATTCCCGTCGTCGCCTTCTCGGTCGGCGAAGAAGA
GCTTGCCGGCCTCGACACGAAGCCGCTTGTCGGCCATCTCGCTGCCTGGAACTATTTCGAGTCTGTGGAAAGCCCGGCCA
ACAAGAAGTTCATCAAGGACTGGCACGCTTATACCAAGAACGACAAGCGCGTGACGAACGACCCGATGGAAGCTGCCTAT
ATCGGCTTCAACGCATGGGTTAAGGCCGTCCAGGCTGCCGGCACGACCGATACCGACAAGGTTCTCGACTCCATCATCGG
CGTCAGCGTTCCGAACCTCTCCGGCGGTTATGCGACCGTCATGCCGAACCACCACATCACCAAGCCGGTGCTGATCGGTG
AAATCCAGGCCAACGGCCAGTTCGAAATCGTCCAGCAGACGCCCGCCGTCGTCGGCGACGAATGGTCGGATTACCTGCCC
GACTCCAAGGACCTGATCTCCGATTGGCGCAAGCCGATGTCCTGCGGCAACTTCAACGTTGCCACCGGCAAGTGCGGCGG
CAAGGGCTCCTGA

Upstream 100 bases:

>100_bases
TTGCGTATGTGTTTTTGCGATGCAGCACCCGATAGTCCCCTCGGCAACAGTTAAATTCCGTTTCCGGCCTGTTGCGGAAC
AAGAAGAGGGGCTCAACCAA

Downstream 100 bases:

>100_bases
GTACGACCCCGATCAGATGATTGCCTGAAGACTTCCGTCCGGGTTTGACACCCGGGCGGAAGCTCCGTCCCAGCGATTGC
GCCGCGAGGCCAACACACTC

Product: urea ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MNLRSTITGAALGAVMAASAAFQGALAADDTIKVGILHSLSGTMAISETTLKDAMLMLIDEQNKKGGLLGKKLEAVVVDP
ASDWPLFAEKARELIQKDKVAAVFGCWTSSSRKSVLPVFEELNSLLFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLM
EKEGVKRFVLEGTDYVYPRTTNKILEAYLISKGIPKEDIMTNYTPFGFSDWQTEVSKIKEFGSAGKKTAVVSTINGDANV
PFYKELGNKGIKATDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFESVESPANKKFIKDWHAYTKNDKRVTNDPMEAAY
IGFNAWVKAVQAAGTTDTDKVLDSIIGVSVPNLSGGYATVMPNHHITKPVLIGEIQANGQFEIVQQTPAVVGDEWSDYLP
DSKDLISDWRKPMSCGNFNVATGKCGGKGS

Sequences:

>Translated_430_residues
MNLRSTITGAALGAVMAASAAFQGALAADDTIKVGILHSLSGTMAISETTLKDAMLMLIDEQNKKGGLLGKKLEAVVVDP
ASDWPLFAEKARELIQKDKVAAVFGCWTSSSRKSVLPVFEELNSLLFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLM
EKEGVKRFVLEGTDYVYPRTTNKILEAYLISKGIPKEDIMTNYTPFGFSDWQTEVSKIKEFGSAGKKTAVVSTINGDANV
PFYKELGNKGIKATDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFESVESPANKKFIKDWHAYTKNDKRVTNDPMEAAY
IGFNAWVKAVQAAGTTDTDKVLDSIIGVSVPNLSGGYATVMPNHHITKPVLIGEIQANGQFEIVQQTPAVVGDEWSDYLP
DSKDLISDWRKPMSCGNFNVATGKCGGKGS
>Mature_430_residues
MNLRSTITGAALGAVMAASAAFQGALAADDTIKVGILHSLSGTMAISETTLKDAMLMLIDEQNKKGGLLGKKLEAVVVDP
ASDWPLFAEKARELIQKDKVAAVFGCWTSSSRKSVLPVFEELNSLLFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLM
EKEGVKRFVLEGTDYVYPRTTNKILEAYLISKGIPKEDIMTNYTPFGFSDWQTEVSKIKEFGSAGKKTAVVSTINGDANV
PFYKELGNKGIKATDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFESVESPANKKFIKDWHAYTKNDKRVTNDPMEAAY
IGFNAWVKAVQAAGTTDTDKVLDSIIGVSVPNLSGGYATVMPNHHITKPVLIGEIQANGQFEIVQQTPAVVGDEWSDYLP
DSKDLISDWRKPMSCGNFNVATGKCGGKGS

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46634; Mature: 46634

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRSTITGAALGAVMAASAAFQGALAADDTIKVGILHSLSGTMAISETTLKDAMLMLID
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHEEEEEE
EQNKKGGLLGKKLEAVVVDPASDWPLFAEKARELIQKDKVAAVFGCWTSSSRKSVLPVFE
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHH
ELNSLLFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLMEKEGVKRFVLEGTDYVYPRT
HHHHHEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCEECCCC
TNKILEAYLISKGIPKEDIMTNYTPFGFSDWQTEVSKIKEFGSAGKKTAVVSTINGDANV
HHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PFYKELGNKGIKATDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFESVESPANKKFIKD
CHHHHHCCCCCEECCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
WHAYTKNDKRVTNDPMEAAYIGFNAWVKAVQAAGTTDTDKVLDSIIGVSVPNLSGGYATV
HHHHCCCCCCCCCCCCHHEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEE
MPNHHITKPVLIGEIQANGQFEIVQQTPAVVGDEWSDYLPDSKDLISDWRKPMSCGNFNV
CCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCEE
ATGKCGGKGS
EECCCCCCCC
>Mature Secondary Structure
MNLRSTITGAALGAVMAASAAFQGALAADDTIKVGILHSLSGTMAISETTLKDAMLMLID
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHHHHHHHHEEEEEE
EQNKKGGLLGKKLEAVVVDPASDWPLFAEKARELIQKDKVAAVFGCWTSSSRKSVLPVFE
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHH
ELNSLLFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLMEKEGVKRFVLEGTDYVYPRT
HHHHHEEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEECCCCEECCCC
TNKILEAYLISKGIPKEDIMTNYTPFGFSDWQTEVSKIKEFGSAGKKTAVVSTINGDANV
HHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PFYKELGNKGIKATDIPVVAFSVGEEELAGLDTKPLVGHLAAWNYFESVESPANKKFIKD
CHHHHHCCCCCEECCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
WHAYTKNDKRVTNDPMEAAYIGFNAWVKAVQAAGTTDTDKVLDSIIGVSVPNLSGGYATV
HHHHCCCCCCCCCCCCHHEEECHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEEE
MPNHHITKPVLIGEIQANGQFEIVQQTPAVVGDEWSDYLPDSKDLISDWRKPMSCGNFNV
CCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCHHHHHHHHCCCCCCCCEE
ATGKCGGKGS
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]