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The map label for this gene is 209550561

Identifier: 209550561

GI number: 209550561

Start: 3048513

End: 3049937

Strand: Reverse

Name: 209550561

Synonym: Rleg2_2985

Alternate gene names: NA

Gene position: 3049937-3048513 (Counterclockwise)

Preceding gene: 209550564

Following gene: 209550560

Centisome position: 67.21

GC content: 59.23

Gene sequence:

>1425_bases
ATGTTATCCAACCTCATCAACCGGCAGGTCTTGCGAGAGGCTCTTCTCCTCGCCTTTATCGGCCTCGTTATACTGACGCT
CATTCCGTTCGGGAGCGTTACGCCCTTTCCCTTCGCCTTTGCTGCGATCGGCATGTTTGCCCTTGGCGCCATCTCGGCAC
TGCTGTTCGGAGAGCCGAGACAGAGCAGATGGGTCTTCAGCAGCGCTTTGTTGGTGCTCGTCGTGGTGACGGGCTGGACG
TTCATCCAGACCATCGAGCTGCCTTCCAACTGGCTGGCAAACCCGGCCTGGCGTGCTGCTCGTGACCTGGCAGGTGTCGA
GTACGCGGCAATCTCGGTCGCTCCGGCCGACACGCTGGCGTCGATCCTCTCGGTCGCGCTGCCTTTCGTCACCTTCCTGA
CCGGGCTTCTCTTATGCGATACTGATCGGCGCGCAAGGAAAGTGCTGACCGTCCTCGGGCTTTCAGCTGGTATCATCGCT
GTGTTCGGGCTGATCCAGTTTTCACTGTTCCCAAACATCCTGATCATCGTGGAGAAACAGGCCTATCTCGACAGCCTGAC
CGCGGTCTTCGTCAACCGCAATACCGCGGCGACCTTCCTCGGGCTTGGAACGCTGCTGATGCTGACCCTGGTCAGAGACA
TCGCCCGTTCCTATTCAAACCATCCGCCCGGCGAGCCGGGCCGAAACACGCTTCTGTTGAAATCGTGGATCTACATGCTG
CTCTTGTGCGCATGTTTCACCGCACTGATGCTGAGCCGCTCGCGCGCCGGCATCTTCGCGACCTTTATTGCCGCCCTCAT
TTATTTTCCGTGGCTGGCCATGAATTGGAACGGCTCGCGGCGTTCTCTGAAACCGGCGCCGCAATGGCGTTCGATGCTGA
AACTTCTCTCAGCGATCGTTTTCATCGTCGCGCTGCTGTCGGTGTTTGCAGGCCAGGCGATTTTGCGCGCGCAAGAGCGC
CGGCTCGAGGATGATGATCGGTTCTGCATCCTGCCGGGCATATGGCGTGCCATTTCGGATCACTGGTTGACCGGGACCGG
CCTTGGAACCTTCCGGACCGTATTTCCGGCCTACCGCGATTCTGCCTGCGGAATTTTCGGGATCTTCGACCGAGCGCATA
ATTTCTATCTCGAAGGGTTCCTGGGCCTCGGGATATTGTTCCCGGTCACGGCAATCCTTGCCTTCGCGGTCCTTGCCAAG
GTGTTCCGGCAGGGGTTCGCCCAAAGGCGGCGTCTCAGGCATTTTGTGCTGCTTGGCCTGGCGGCAACGGTTTTGGTCGC
CCTTCATGCGGCCGTCGATTTTTCGCTGCAAATACCGGGTTTTGCCGTGTTCTTTTCCGCCTTCCTCAGTGCTGTCGTCG
CGATAAGCCTTGGGCGCAGCAACGGAGAAGCGGACGTGGCATATGAGCGGCCGCTCAGCCGCTAA

Upstream 100 bases:

>100_bases
TTTAACACGCAAGCCATTGATATGCAACTTATGTTAGTACGTGCATATTGACCGCTTGGGTTGCAATTCCGTTATTGCTG
CCCGCTGGTGAAGAAATCGA

Downstream 100 bases:

>100_bases
AATTTAAACAGATGGTTTATGAAGGTTTTTGAAAAATAGCGATTGTGCAGGTGCGAACTGTTGACTCTGAAACGCAAGAA
ATTTTATAGCGGGTCTAGCC

Product: endo-1,4-beta-xylanase

Products: NA

Alternate protein names: O-Antigen Polymerase; Polysaccharide Export Protein; Lipid A Core

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MLSNLINRQVLREALLLAFIGLVILTLIPFGSVTPFPFAFAAIGMFALGAISALLFGEPRQSRWVFSSALLVLVVVTGWT
FIQTIELPSNWLANPAWRAARDLAGVEYAAISVAPADTLASILSVALPFVTFLTGLLLCDTDRRARKVLTVLGLSAGIIA
VFGLIQFSLFPNILIIVEKQAYLDSLTAVFVNRNTAATFLGLGTLLMLTLVRDIARSYSNHPPGEPGRNTLLLKSWIYML
LLCACFTALMLSRSRAGIFATFIAALIYFPWLAMNWNGSRRSLKPAPQWRSMLKLLSAIVFIVALLSVFAGQAILRAQER
RLEDDDRFCILPGIWRAISDHWLTGTGLGTFRTVFPAYRDSACGIFGIFDRAHNFYLEGFLGLGILFPVTAILAFAVLAK
VFRQGFAQRRRLRHFVLLGLAATVLVALHAAVDFSLQIPGFAVFFSAFLSAVVAISLGRSNGEADVAYERPLSR

Sequences:

>Translated_474_residues
MLSNLINRQVLREALLLAFIGLVILTLIPFGSVTPFPFAFAAIGMFALGAISALLFGEPRQSRWVFSSALLVLVVVTGWT
FIQTIELPSNWLANPAWRAARDLAGVEYAAISVAPADTLASILSVALPFVTFLTGLLLCDTDRRARKVLTVLGLSAGIIA
VFGLIQFSLFPNILIIVEKQAYLDSLTAVFVNRNTAATFLGLGTLLMLTLVRDIARSYSNHPPGEPGRNTLLLKSWIYML
LLCACFTALMLSRSRAGIFATFIAALIYFPWLAMNWNGSRRSLKPAPQWRSMLKLLSAIVFIVALLSVFAGQAILRAQER
RLEDDDRFCILPGIWRAISDHWLTGTGLGTFRTVFPAYRDSACGIFGIFDRAHNFYLEGFLGLGILFPVTAILAFAVLAK
VFRQGFAQRRRLRHFVLLGLAATVLVALHAAVDFSLQIPGFAVFFSAFLSAVVAISLGRSNGEADVAYERPLSR
>Mature_474_residues
MLSNLINRQVLREALLLAFIGLVILTLIPFGSVTPFPFAFAAIGMFALGAISALLFGEPRQSRWVFSSALLVLVVVTGWT
FIQTIELPSNWLANPAWRAARDLAGVEYAAISVAPADTLASILSVALPFVTFLTGLLLCDTDRRARKVLTVLGLSAGIIA
VFGLIQFSLFPNILIIVEKQAYLDSLTAVFVNRNTAATFLGLGTLLMLTLVRDIARSYSNHPPGEPGRNTLLLKSWIYML
LLCACFTALMLSRSRAGIFATFIAALIYFPWLAMNWNGSRRSLKPAPQWRSMLKLLSAIVFIVALLSVFAGQAILRAQER
RLEDDDRFCILPGIWRAISDHWLTGTGLGTFRTVFPAYRDSACGIFGIFDRAHNFYLEGFLGLGILFPVTAILAFAVLAK
VFRQGFAQRRRLRHFVLLGLAATVLVALHAAVDFSLQIPGFAVFFSAFLSAVVAISLGRSNGEADVAYERPLSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51984; Mature: 51984

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNLINRQVLREALLLAFIGLVILTLIPFGSVTPFPFAFAAIGMFALGAISALLFGEPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QSRWVFSSALLVLVVVTGWTFIQTIELPSNWLANPAWRAARDLAGVEYAAISVAPADTLA
HHHHHHHHHHHHHHHHHCHHHEEEEECCCHHCCCHHHHHHHHHCCCHHHEEEECCHHHHH
SILSVALPFVTFLTGLLLCDTDRRARKVLTVLGLSAGIIAVFGLIQFSLFPNILIIVEKQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
AYLDSLTAVFVNRNTAATFLGLGTLLMLTLVRDIARSYSNHPPGEPGRNTLLLKSWIYML
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LLCACFTALMLSRSRAGIFATFIAALIYFPWLAMNWNGSRRSLKPAPQWRSMLKLLSAIV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHH
FIVALLSVFAGQAILRAQERRLEDDDRFCILPGIWRAISDHWLTGTGLGTFRTVFPAYRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
SACGIFGIFDRAHNFYLEGFLGLGILFPVTAILAFAVLAKVFRQGFAQRRRLRHFVLLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVLVALHAAVDFSLQIPGFAVFFSAFLSAVVAISLGRSNGEADVAYERPLSR
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSNLINRQVLREALLLAFIGLVILTLIPFGSVTPFPFAFAAIGMFALGAISALLFGEPR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
QSRWVFSSALLVLVVVTGWTFIQTIELPSNWLANPAWRAARDLAGVEYAAISVAPADTLA
HHHHHHHHHHHHHHHHHCHHHEEEEECCCHHCCCHHHHHHHHHCCCHHHEEEECCHHHHH
SILSVALPFVTFLTGLLLCDTDRRARKVLTVLGLSAGIIAVFGLIQFSLFPNILIIVEKQ
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
AYLDSLTAVFVNRNTAATFLGLGTLLMLTLVRDIARSYSNHPPGEPGRNTLLLKSWIYML
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LLCACFTALMLSRSRAGIFATFIAALIYFPWLAMNWNGSRRSLKPAPQWRSMLKLLSAIV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHHHH
FIVALLSVFAGQAILRAQERRLEDDDRFCILPGIWRAISDHWLTGTGLGTFRTVFPAYRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
SACGIFGIFDRAHNFYLEGFLGLGILFPVTAILAFAVLAKVFRQGFAQRRRLRHFVLLGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AATVLVALHAAVDFSLQIPGFAVFFSAFLSAVVAISLGRSNGEADVAYERPLSR
HHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA