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The map label for this gene is 209550535

Identifier: 209550535

GI number: 209550535

Start: 3018946

End: 3019371

Strand: Reverse

Name: 209550535

Synonym: Rleg2_2959

Alternate gene names: NA

Gene position: 3019371-3018946 (Counterclockwise)

Preceding gene: 209550536

Following gene: 209550534

Centisome position: 66.54

GC content: 54.93

Gene sequence:

>426_bases
ATGAAGGCTAAATCCCCGAATTCGATCGACGTCTATGTTGGCAACCGCGTCAGGGTGCGGCGAAAGACGCTCGGGATGAC
CCAGCATGGTCTGGCCGAACTTCTGGGCATTACCTTCCAGCAGATCCAGAAATACGAAAAAGGAACGAACCGGATAGGCG
CCAGCCGCCTTCAACGCATATCCGAGATTCTTCGCGTGCCCATCGGCTTTTTCTTCGAGAACGGTGGCTCCGGACCGATC
GAAGGTGAGACGAGCGAATTGAACAAGTTTTTGTCCTCGAAGGAGGGGCTGGCGCTCAACAAGGCGTTCATCGCCATCGA
GGATCCGAATATCAGGCAAAAACTGGTGGCATTGGCCAAAAGTCTGGCCGTTGCCGGCTTGTCGGAGATCGACGGTGATT
TGCAGGATCCGGTTGTAAACGGCTGA

Upstream 100 bases:

>100_bases
GCCGAAAAAAATCCTTACGAAATATTTACTTTTAGTTGCATTTTTGCTTAAACTCTCCATTATACGGCTGGCATGCTGAT
AAAGTGGGAGACTTATTCAC

Downstream 100 bases:

>100_bases
GACGGATGGTGCGTCACCTGCAGACATTCGGCGATCTGCGGTTGATCGAGACGAATGGTGACTGCTCCGCCGTCCGATCA
GGGGGCTGCTGATGTCGGCC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTNRIGASRLQRISEILRVPIGFFFENGGSGPI
EGETSELNKFLSSKEGLALNKAFIAIEDPNIRQKLVALAKSLAVAGLSEIDGDLQDPVVNG

Sequences:

>Translated_141_residues
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTNRIGASRLQRISEILRVPIGFFFENGGSGPI
EGETSELNKFLSSKEGLALNKAFIAIEDPNIRQKLVALAKSLAVAGLSEIDGDLQDPVVNG
>Mature_141_residues
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTNRIGASRLQRISEILRVPIGFFFENGGSGPI
EGETSELNKFLSSKEGLALNKAFIAIEDPNIRQKLVALAKSLAVAGLSEIDGDLQDPVVNG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15367; Mature: 15367

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTNRIGASRLQRI
CCCCCCCCEEEEECCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEILRVPIGFFFENGGSGPIEGETSELNKFLSSKEGLALNKAFIAIEDPNIRQKLVALAK
HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCEECEEEEEEECCCHHHHHHHHHH
SLAVAGLSEIDGDLQDPVVNG
HHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKAKSPNSIDVYVGNRVRVRRKTLGMTQHGLAELLGITFQQIQKYEKGTNRIGASRLQRI
CCCCCCCCEEEEECCEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SEILRVPIGFFFENGGSGPIEGETSELNKFLSSKEGLALNKAFIAIEDPNIRQKLVALAK
HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHCCCCCEECEEEEEEECCCHHHHHHHHHH
SLAVAGLSEIDGDLQDPVVNG
HHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]