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The map label for this gene is 209550534

Identifier: 209550534

GI number: 209550534

Start: 3017593

End: 3018825

Strand: Reverse

Name: 209550534

Synonym: Rleg2_2957

Alternate gene names: NA

Gene position: 3018825-3017593 (Counterclockwise)

Preceding gene: 209550535

Following gene: 209550533

Centisome position: 66.52

GC content: 62.21

Gene sequence:

>1233_bases
ATGAATTCAGCCCTACATCCGGCCCACTATTCCGACAGGATCATATCGCCGGGGGAGACTCTTTCCCGCGTCGAACCTTT
TTTGGCCAGGTTCGGCATTACCAGGGTTGCGCGACATACCGGGTTGGATGATATCGGAATTCCCGTCTGGTGCGCCTATG
CCCCGAATTCGCGGTCGATCGTGATTGCTCAGGGAAAGGGCCTGACGGATCTGGACGCCAAGGTGTCCACTGTCATGGAG
GCCCTCGAACGGGCCGTTGCCGGCGAACCCTTCGTCAAGCGCGTCCACGGTTCCTGTTCCCGCCTGCAGGCGATGGGCTA
CCAAGTCGACAGGTTGAGCTGCCTGACCGCCGTCCATAAACCCGATCTCGGGCCGGATGACGAAACCGAATGGGTTGCCG
GCATCGATATCCTCAGCGGCGACGAGATCCATATTCCCTTCGAAGCGGTGGTGCTCGACCGGACGCGGGACGCGCGATAC
TGGATGTCGTCGGATGGCCTGGCTTCGGGAAACAGTGTCGAGGAGGCAATTTTTCATGGCGTCCTGGAGCGCATCGAGCG
TGACGCTCAGGTGTTGTGGCAGGTGGGCGGGGAGGCCGATCTCTATGCCGGCTGCGTCGATCCCCGCGGCTTTGAGGATG
GTGCCCTGAACGGGCTCGTCGACAAGATCGAAGCATCGGGATTGGCGCTCAGGCTGTTCGATATCACCAGCGACATCGCG
ATCCCCTGTTTCACCGCCATGCTGGGTCCTGGGGAGTTCATTCCAGGCTCCAGGCATATTTACGCTGACAGGGACATTCG
CCTCGTCGAGGTGACCGGCGGCACCGGGGCGCACCCGTCTCCCGTGCGGGCGGCCATTCGGGCGGTGACGGAAGCCGTGC
AATCCCGGCTGACCTATATCAGCGGCGCCAGGGACGATATTTCTCCTGCCACTTTCTTAAGATCCCTTCCGCCGCTGATG
CGGCAGGCCTTCGATGCGGTTGCCGCACCGCCTGCCGCCCTCCGCCGTGACGGCGCGGCAGGCTATCGGGCACGGAATCT
GACGGAGCTGCTGCAACAAGTGCTTGACGCTCTGCGCAACCGAGGGATCGCTTCGGTCATCCGAGTCCGCCTCAGCGACG
ACACGCTTCCCTTCAGCGTCGTCAAGATCGTTATCCCTGAGCTCGAAAATCCGGAGGGGGAGCGCGCCCGGCGATTTGGA
ACAAGGGCTCTGGCCAAGGCGATCGGGTTTTGA

Upstream 100 bases:

>100_bases
CAGACATTCGGCGATCTGCGGTTGATCGAGACGAATGGTGACTGCTCCGCCGTCCGATCAGGGGGCTGCTGATGTCGGCC
CACATCTATGCCGGTGCGCT

Downstream 100 bases:

>100_bases
AGATCATTTTCGCAGGTCCCAGTCTTCCCGATGCGGCATCGCTCGCCGGCGAGGCGGTCCGTGTCCTGCCGCCCGCCACA
CAAGGCGATGTCCTGGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNSALHPAHYSDRIISPGETLSRVEPFLARFGITRVARHTGLDDIGIPVWCAYAPNSRSIVIAQGKGLTDLDAKVSTVME
ALERAVAGEPFVKRVHGSCSRLQAMGYQVDRLSCLTAVHKPDLGPDDETEWVAGIDILSGDEIHIPFEAVVLDRTRDARY
WMSSDGLASGNSVEEAIFHGVLERIERDAQVLWQVGGEADLYAGCVDPRGFEDGALNGLVDKIEASGLALRLFDITSDIA
IPCFTAMLGPGEFIPGSRHIYADRDIRLVEVTGGTGAHPSPVRAAIRAVTEAVQSRLTYISGARDDISPATFLRSLPPLM
RQAFDAVAAPPAALRRDGAAGYRARNLTELLQQVLDALRNRGIASVIRVRLSDDTLPFSVVKIVIPELENPEGERARRFG
TRALAKAIGF

Sequences:

>Translated_410_residues
MNSALHPAHYSDRIISPGETLSRVEPFLARFGITRVARHTGLDDIGIPVWCAYAPNSRSIVIAQGKGLTDLDAKVSTVME
ALERAVAGEPFVKRVHGSCSRLQAMGYQVDRLSCLTAVHKPDLGPDDETEWVAGIDILSGDEIHIPFEAVVLDRTRDARY
WMSSDGLASGNSVEEAIFHGVLERIERDAQVLWQVGGEADLYAGCVDPRGFEDGALNGLVDKIEASGLALRLFDITSDIA
IPCFTAMLGPGEFIPGSRHIYADRDIRLVEVTGGTGAHPSPVRAAIRAVTEAVQSRLTYISGARDDISPATFLRSLPPLM
RQAFDAVAAPPAALRRDGAAGYRARNLTELLQQVLDALRNRGIASVIRVRLSDDTLPFSVVKIVIPELENPEGERARRFG
TRALAKAIGF
>Mature_410_residues
MNSALHPAHYSDRIISPGETLSRVEPFLARFGITRVARHTGLDDIGIPVWCAYAPNSRSIVIAQGKGLTDLDAKVSTVME
ALERAVAGEPFVKRVHGSCSRLQAMGYQVDRLSCLTAVHKPDLGPDDETEWVAGIDILSGDEIHIPFEAVVLDRTRDARY
WMSSDGLASGNSVEEAIFHGVLERIERDAQVLWQVGGEADLYAGCVDPRGFEDGALNGLVDKIEASGLALRLFDITSDIA
IPCFTAMLGPGEFIPGSRHIYADRDIRLVEVTGGTGAHPSPVRAAIRAVTEAVQSRLTYISGARDDISPATFLRSLPPLM
RQAFDAVAAPPAALRRDGAAGYRARNLTELLQQVLDALRNRGIASVIRVRLSDDTLPFSVVKIVIPELENPEGERARRFG
TRALAKAIGF

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 44440; Mature: 44440

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSALHPAHYSDRIISPGETLSRVEPFLARFGITRVARHTGLDDIGIPVWCAYAPNSRSI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEE
VIAQGKGLTDLDAKVSTVMEALERAVAGEPFVKRVHGSCSRLQAMGYQVDRLSCLTAVHK
EEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHC
PDLGPDDETEWVAGIDILSGDEIHIPFEAVVLDRTRDARYWMSSDGLASGNSVEEAIFHG
CCCCCCCCCCEEEEEEEECCCEEECCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHH
VLERIERDAQVLWQVGGEADLYAGCVDPRGFEDGALNGLVDKIEASGLALRLFDITSDIA
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHH
IPCFTAMLGPGEFIPGSRHIYADRDIRLVEVTGGTGAHPSPVRAAIRAVTEAVQSRLTYI
HHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGARDDISPATFLRSLPPLMRQAFDAVAAPPAALRRDGAAGYRARNLTELLQQVLDALRN
CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
RGIASVIRVRLSDDTLPFSVVKIVIPELENPEGERARRFGTRALAKAIGF
CCHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSALHPAHYSDRIISPGETLSRVEPFLARFGITRVARHTGLDDIGIPVWCAYAPNSRSI
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEE
VIAQGKGLTDLDAKVSTVMEALERAVAGEPFVKRVHGSCSRLQAMGYQVDRLSCLTAVHK
EEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHC
PDLGPDDETEWVAGIDILSGDEIHIPFEAVVLDRTRDARYWMSSDGLASGNSVEEAIFHG
CCCCCCCCCCEEEEEEEECCCEEECCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHH
VLERIERDAQVLWQVGGEADLYAGCVDPRGFEDGALNGLVDKIEASGLALRLFDITSDIA
HHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHH
IPCFTAMLGPGEFIPGSRHIYADRDIRLVEVTGGTGAHPSPVRAAIRAVTEAVQSRLTYI
HHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGARDDISPATFLRSLPPLMRQAFDAVAAPPAALRRDGAAGYRARNLTELLQQVLDALRN
CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
RGIASVIRVRLSDDTLPFSVVKIVIPELENPEGERARRFGTRALAKAIGF
CCHHHHHEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763943 [H]