| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550378
Identifier: 209550378
GI number: 209550378
Start: 2844274
End: 2844753
Strand: Reverse
Name: 209550378
Synonym: Rleg2_2799
Alternate gene names: NA
Gene position: 2844753-2844274 (Counterclockwise)
Preceding gene: 209550383
Following gene: 209550376
Centisome position: 62.69
GC content: 64.38
Gene sequence:
>480_bases ATGGTGGATAAAGAAAAGCGGCCCCTGCATATCAGAACGGCCCTGCGCCTTCTGCATGTCTATTTCTCCTTCGCCCGCGG CATGACGATGGGCGTCAGGGCCGCCTGCTTCGATGCGGAGGGGCGGATTTTTCTGGTGCGCCACAGCTATATCGGCGGCT GGCACATGCCGGGCGGCGGGCTGGAGCGCAACGAGACGGTCGAAGAAGCGCTGGCCAAGGAATTGCGCGAAGAGGGCAAC CTCAGGATCATCGGCAAACCGCAACTGGTCCAGGTCTATTTCAACACCACGAATACTCGCCGCGACCATGTCGTGTTCTA CCGGGCGAATGTCGAGCAGACGGCGCCGCGCCCGCCCGACTGGGAGATCTCCGACAGCGGCTTCTTCCCGCTCGACAGCC TGCCCGAGGGCACGACCGAGGCGACGCATCGCCGCCTTGCCGAGCTTCGTGGCGAGCGGGAGCCCGACCACCGCTGGTGA
Upstream 100 bases:
>100_bases GACGTCGGAAATATGCGCGAGCTTGAACATGCTACGAGACATAGACCAGCTTATTGACAAATCAAACACATCCGGCGCGA TGAAGGGCTGAAACGGAACG
Downstream 100 bases:
>100_bases GGGCTACGCAGTTTTTTAGGCCGCGGCAAGCTTCGCACGTCCATGCGGGCTGTCGAGATCGAGCGCCGGGCCGACGGGAA CGATGCCGGTCGGATTGATG
Product: NUDIX hydrolase
Products: NA
Alternate protein names: Nudix Hydrolase; MutT/Nudix Family Protein; Hydrolase Protein; Hydrolase Protein MutT/Nudix Family; MutT/NUDIX Family Protein; NUDIX Family Hydrolase; MutT/NUDIX Family Hydrolase; Hydrolase NUDIX Family
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MVDKEKRPLHIRTALRLLHVYFSFARGMTMGVRAACFDAEGRIFLVRHSYIGGWHMPGGGLERNETVEEALAKELREEGN LRIIGKPQLVQVYFNTTNTRRDHVVFYRANVEQTAPRPPDWEISDSGFFPLDSLPEGTTEATHRRLAELRGEREPDHRW
Sequences:
>Translated_159_residues MVDKEKRPLHIRTALRLLHVYFSFARGMTMGVRAACFDAEGRIFLVRHSYIGGWHMPGGGLERNETVEEALAKELREEGN LRIIGKPQLVQVYFNTTNTRRDHVVFYRANVEQTAPRPPDWEISDSGFFPLDSLPEGTTEATHRRLAELRGEREPDHRW >Mature_159_residues MVDKEKRPLHIRTALRLLHVYFSFARGMTMGVRAACFDAEGRIFLVRHSYIGGWHMPGGGLERNETVEEALAKELREEGN LRIIGKPQLVQVYFNTTNTRRDHVVFYRANVEQTAPRPPDWEISDSGFFPLDSLPEGTTEATHRRLAELRGEREPDHRW
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18400; Mature: 18400
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDKEKRPLHIRTALRLLHVYFSFARGMTMGVRAACFDAEGRIFLVRHSYIGGWHMPGGG CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEECCCCC LERNETVEEALAKELREEGNLRIIGKPQLVQVYFNTTNTRRDHVVFYRANVEQTAPRPPD CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCHHCCCCCCC WEISDSGFFPLDSLPEGTTEATHRRLAELRGEREPDHRW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVDKEKRPLHIRTALRLLHVYFSFARGMTMGVRAACFDAEGRIFLVRHSYIGGWHMPGGG CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEECCCCCEECCCCC LERNETVEEALAKELREEGNLRIIGKPQLVQVYFNTTNTRRDHVVFYRANVEQTAPRPPD CCCHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCHHCCCCCCC WEISDSGFFPLDSLPEGTTEATHRRLAELRGEREPDHRW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA