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The map label for this gene is petB [H]

Identifier: 209550356

GI number: 209550356

Start: 2820513

End: 2821793

Strand: Reverse

Name: petB [H]

Synonym: Rleg2_2777

Alternate gene names: 209550356

Gene position: 2821793-2820513 (Counterclockwise)

Preceding gene: 209550357

Following gene: 209550355

Centisome position: 62.18

GC content: 58.86

Gene sequence:

>1281_bases
ATGAGTGGCCATTCCAGCTACGAGCCATCAACCGGCCTTGAGAAATGGGTCGATGCGCGCCTGCCTTTGCCGCGCATGGT
CTATGACAGCTTCATTGCATATCCGGTTCCCAGAAACCTGAACTATGCCTATACCTTCGGCGCCATGCTCGCCGTCATGC
TGATCGTACAGATCCTGACGGGTGTCACGCTCGCCATGCATTATGCCGCCGACACGACGATCGCCTTCAACTCCGTTGAA
AAAATCATGCGCGACGTCAACCATGGCTGGCTGCTGCGCTACATGCATGCCAACGGCGCCTCGTTCTTCTTCGTCGCCGT
TTACCTGCACATTGCTCGCGGCCTCTATTACGGTTCCTACAAGGCGCCGCGCGAAATCCTCTGGATCCTCGGCGTCGTCA
TCTACCTCCTGATGATGGCGACCGGCTTCATGGGCTATGTTCTGCCCTGGGGCCAGATGTCCTTCTGGGGCGCGACCGTC
ATCACCGGCTTCTTCTCGGCCTTTCCGCTGGTCGGCGAATGGATCCAGCAGTTCCTGCTTGGCGGCTTCGCCGTCGATCA
GCCGACGCTGAACCGCTTCTTCTCGCTGCACTACCTGCTGCCTTTCATGATCGCCGGCGTCGTCGTTCTGCACATCTGGG
CGCTGCACGTCACCGGCCAGACGAACCCGACCGGCATCGAGGTCAAGACGAAGACGGACACGGTGCGTTTCACGCCTTAT
GCGACGATGAAGGATGCGCTCGGCGTCTCCGTCTTCCTGCTGGTCTATGCCTATTTCGTCTTCTACCTGCCGAACTTCCT
CGGCCATGCAGACAACTATATCCCGGCAGACCCGTTGAAGACGCCGGCCCATATCGTTCCGGAATGGTACTTCCTGCCGT
TCTACGCGATGCTGCGTTCGATCACCTTCAATGTCGGCCCGATCGATTCCAAGCTCGGCGGCGTGCTCGTCATGTTCGGT
GCGATCATCGTGCTGTTCTTCCTGCCCTGGCTCGACACCTCCAAGGTTCGCTCGGCGGTCTACCGTCCGTGGTACAAGGT
GTTCTTCTGGTTGTTCGTGATCAATGCGATCATCCTCGGCTGGCTCGGTTCGCAGCCTGCGGAAGGTAAGTTCGTCATGG
TCTCGCAGTTCTGCACGCTGCTCTACTTCGCTTTCTTCCTGGTCGCGATGCCAGTTCTCGGCCTGGTGGAAACGCCGCGC
CGCATCCCGAACTCGATCACCGAAGCGGTGCTCGAAAAGCGCAACAAGACAGTTGCTGCCAATGCAGCGGCCAATGCGTA
A

Upstream 100 bases:

>100_bases
GCCGCATCCGTAAGGGGCCTGCGCCGCAGAATCTGGCGATTCCGACCTTTTCATTTATATCCGATACCAAGATCAAGATC
GGTTGAGGGGAGACTGATTA

Downstream 100 bases:

>100_bases
GCGAGCGGCGGAAGGAAACAGAAATATGAAAACGCTTGTTGCAAGCATTCTTTCGCTCGCAGTCGCTGCCGTTCTCGGCA
GCGCAGCCTTGGCCCAGGAA

Product: cytochrome b/b6 domain

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MSGHSSYEPSTGLEKWVDARLPLPRMVYDSFIAYPVPRNLNYAYTFGAMLAVMLIVQILTGVTLAMHYAADTTIAFNSVE
KIMRDVNHGWLLRYMHANGASFFFVAVYLHIARGLYYGSYKAPREILWILGVVIYLLMMATGFMGYVLPWGQMSFWGATV
ITGFFSAFPLVGEWIQQFLLGGFAVDQPTLNRFFSLHYLLPFMIAGVVVLHIWALHVTGQTNPTGIEVKTKTDTVRFTPY
ATMKDALGVSVFLLVYAYFVFYLPNFLGHADNYIPADPLKTPAHIVPEWYFLPFYAMLRSITFNVGPIDSKLGGVLVMFG
AIIVLFFLPWLDTSKVRSAVYRPWYKVFFWLFVINAIILGWLGSQPAEGKFVMVSQFCTLLYFAFFLVAMPVLGLVETPR
RIPNSITEAVLEKRNKTVAANAAANA

Sequences:

>Translated_426_residues
MSGHSSYEPSTGLEKWVDARLPLPRMVYDSFIAYPVPRNLNYAYTFGAMLAVMLIVQILTGVTLAMHYAADTTIAFNSVE
KIMRDVNHGWLLRYMHANGASFFFVAVYLHIARGLYYGSYKAPREILWILGVVIYLLMMATGFMGYVLPWGQMSFWGATV
ITGFFSAFPLVGEWIQQFLLGGFAVDQPTLNRFFSLHYLLPFMIAGVVVLHIWALHVTGQTNPTGIEVKTKTDTVRFTPY
ATMKDALGVSVFLLVYAYFVFYLPNFLGHADNYIPADPLKTPAHIVPEWYFLPFYAMLRSITFNVGPIDSKLGGVLVMFG
AIIVLFFLPWLDTSKVRSAVYRPWYKVFFWLFVINAIILGWLGSQPAEGKFVMVSQFCTLLYFAFFLVAMPVLGLVETPR
RIPNSITEAVLEKRNKTVAANAAANA
>Mature_425_residues
SGHSSYEPSTGLEKWVDARLPLPRMVYDSFIAYPVPRNLNYAYTFGAMLAVMLIVQILTGVTLAMHYAADTTIAFNSVEK
IMRDVNHGWLLRYMHANGASFFFVAVYLHIARGLYYGSYKAPREILWILGVVIYLLMMATGFMGYVLPWGQMSFWGATVI
TGFFSAFPLVGEWIQQFLLGGFAVDQPTLNRFFSLHYLLPFMIAGVVVLHIWALHVTGQTNPTGIEVKTKTDTVRFTPYA
TMKDALGVSVFLLVYAYFVFYLPNFLGHADNYIPADPLKTPAHIVPEWYFLPFYAMLRSITFNVGPIDSKLGGVLVMFGA
IIVLFFLPWLDTSKVRSAVYRPWYKVFFWLFVINAIILGWLGSQPAEGKFVMVSQFCTLLYFAFFLVAMPVLGLVETPRR
IPNSITEAVLEKRNKTVAANAAANA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=377, Percent_Identity=47.4801061007958, Blast_Score=342, Evalue=3e-94,
Organism=Saccharomyces cerevisiae, GI6226529, Length=374, Percent_Identity=50, Blast_Score=351, Evalue=1e-97,
Organism=Saccharomyces cerevisiae, GI6226532, Length=244, Percent_Identity=50.8196721311475, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6226531, Length=157, Percent_Identity=53.5031847133758, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6226530, Length=136, Percent_Identity=50.7352941176471, Blast_Score=143, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 48046; Mature: 47915

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSSYEPSTGLEKWVDARLPLPRMVYDSFIAYPVPRNLNYAYTFGAMLAVMLIVQILT
CCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVTLAMHYAADTTIAFNSVEKIMRDVNHGWLLRYMHANGASFFFVAVYLHIARGLYYGSY
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
KAPREILWILGVVIYLLMMATGFMGYVLPWGQMSFWGATVITGFFSAFPLVGEWIQQFLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGFAVDQPTLNRFFSLHYLLPFMIAGVVVLHIWALHVTGQTNPTGIEVKTKTDTVRFTPY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCEEEECCC
ATMKDALGVSVFLLVYAYFVFYLPNFLGHADNYIPADPLKTPAHIVPEWYFLPFYAMLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHH
ITFNVGPIDSKLGGVLVMFGAIIVLFFLPWLDTSKVRSAVYRPWYKVFFWLFVINAIILG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGSQPAEGKFVMVSQFCTLLYFAFFLVAMPVLGLVETPRRIPNSITEAVLEKRNKTVAA
HCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHCCCEEEC
NAAANA
CCCCCC
>Mature Secondary Structure 
SGHSSYEPSTGLEKWVDARLPLPRMVYDSFIAYPVPRNLNYAYTFGAMLAVMLIVQILT
CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
GVTLAMHYAADTTIAFNSVEKIMRDVNHGWLLRYMHANGASFFFVAVYLHIARGLYYGSY
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
KAPREILWILGVVIYLLMMATGFMGYVLPWGQMSFWGATVITGFFSAFPLVGEWIQQFLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGFAVDQPTLNRFFSLHYLLPFMIAGVVVLHIWALHVTGQTNPTGIEVKTKTDTVRFTPY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEECCCEEEECCC
ATMKDALGVSVFLLVYAYFVFYLPNFLGHADNYIPADPLKTPAHIVPEWYFLPFYAMLRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHH
ITFNVGPIDSKLGGVLVMFGAIIVLFFLPWLDTSKVRSAVYRPWYKVFFWLFVINAIILG
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLGSQPAEGKFVMVSQFCTLLYFAFFLVAMPVLGLVETPRRIPNSITEAVLEKRNKTVAA
HCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHCHHHHHHHHHHHCCCEEEC
NAAANA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2560136 [H]