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The map label for this gene is lpxC [H]

Identifier: 209550165

GI number: 209550165

Start: 2623114

End: 2624070

Strand: Reverse

Name: lpxC [H]

Synonym: Rleg2_2585

Alternate gene names: 209550165

Gene position: 2624070-2623114 (Counterclockwise)

Preceding gene: 209550166

Following gene: 209550164

Centisome position: 57.83

GC content: 61.76

Gene sequence:

>957_bases
ATGGCAATTGGCTTGCTGGGTTTTCAAACGACGGTATCGCGTCCCGTGACGCTTTCGGGCATCGGGGTCCATTCGGGTGC
TAATGTCTCGATCACGCTGAACCCGGCGGAATCGGATACCGGCGTCATTTTCCAGCGCATGCATGCCAATGGCGATGTCA
CCGAACTCAAGGCCGTCTCCTCGCAGGTCGGCAATACCGACCTCTGCACCGTACTCGGCTTCTCGCCCGCCCATTCGGTC
GCGACGATCGAGCATGTGATGGCGGCGATCTATGCGCTCGGCCTCGACAATGTGGTGATCGAGGTGCAGGGCTCCGAAAT
GCCGATCATGGACGGCAGTTCGCTGCCCTTCGTCGAGGCGATCGAGCAGGTCGGTCTTGTCTCGCTCGGCGTCAAGCGCC
GCTATATCCGTATCACCAAGCCGGTGCGAATCGAGCATGGCGGCTCCTGGAGCGAATTCCGTCCCTATGACGGCACGCGC
TTCGAAGTCGAGATCGATTTCGACTGCCCGCTGATCGGCCGGCAGAAGTGGGCGGGCGACATGACCGCGGCTGTCTTCAA
GGCCGAGCTTTCCCGCGCCCGCACCTTCGGCTTCATGCGCGATGTCGAGCGTCTCTGGGCCTCGGGCCACGCGCTCGGCT
CCTCGCTCGAAAATTCCGTCGTCATCTCGGACGACAATACCGTCATCAACGTCGAAGGGCTGCGTTACGCCAAGGACGAA
TTCGTCCGCCACAAGACGCTCGATGCTGTCGGCGATCTATCGCTTGCCAGCGCCCCGTTCATCGGCTGCTACCGTTCCTA
TCGCGGCGGCCATAAGATGAATGCCAATGCGCTGAAGGCGCTGCTTGCCGATCCTTCCGCCTATGAGGTTGTGGAGACGT
CGACGCCGCGCCAACGTGTTGCCGCCCGCGAACTGATCGCGGTAAGCGCTTCGGAATTCGCTCCCTGGTCGGCATGA

Upstream 100 bases:

>100_bases
AACTGCCCCACGAGTCCTTTCTAAAGGCTCGTTGTACAGAACGAACGATAACCGCGCCGATTGGGCAGACTGCCGGTGCG
GAAGAATAAAGGCAGAATTT

Downstream 100 bases:

>100_bases
CCTCCAGCACATTCTCAAGACCAGGCCGCCTCTTTCCCGGAGGCGGTTTTTTTTATGTCCGCCGGGTCAGATGCTTTCCT
GCCACAGGTCGGGGAAGAAG

Product: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

Products: NA

Alternate protein names: UDP-3-O-acyl-GlcNAc deacetylase [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRMHANGDVTELKAVSSQVGNTDLCTVLGFSPAHSV
ATIEHVMAAIYALGLDNVVIEVQGSEMPIMDGSSLPFVEAIEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTR
FEVEIDFDCPLIGRQKWAGDMTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLASAPFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRVAARELIAVSASEFAPWSA

Sequences:

>Translated_318_residues
MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRMHANGDVTELKAVSSQVGNTDLCTVLGFSPAHSV
ATIEHVMAAIYALGLDNVVIEVQGSEMPIMDGSSLPFVEAIEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTR
FEVEIDFDCPLIGRQKWAGDMTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
FVRHKTLDAVGDLSLASAPFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRVAARELIAVSASEFAPWSA
>Mature_317_residues
AIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRMHANGDVTELKAVSSQVGNTDLCTVLGFSPAHSVA
TIEHVMAAIYALGLDNVVIEVQGSEMPIMDGSSLPFVEAIEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRF
EVEIDFDCPLIGRQKWAGDMTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDEF
VRHKTLDAVGDLSLASAPFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRVAARELIAVSASEFAPWSA

Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]

COG id: COG0774

COG function: function code M; UDP-3-O-acyl-N-acetylglucosamine deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lpxC family [H]

Homologues:

Organism=Escherichia coli, GI1786285, Length=285, Percent_Identity=43.5087719298246, Blast_Score=246, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR004463
- InterPro:   IPR011334
- InterPro:   IPR015870 [H]

Pfam domain/function: PF03331 LpxC [H]

EC number: 3.5.1.-

Molecular weight: Translated: 34347; Mature: 34216

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRMHANGDVTELKAVS
CEEEEEECHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHH
SQVGNTDLCTVLGFSPAHSVATIEHVMAAIYALGLDNVVIEVQGSEMPIMDGSSLPFVEA
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCHHHH
IEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
HHHCCHHEECCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHCCCH
MTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCEEEEECCCCHHHHH
FVRHKTLDAVGDLSLASAPFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRV
HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEEECCCCHHHH
AARELIAVSASEFAPWSA
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AIGLLGFQTTVSRPVTLSGIGVHSGANVSITLNPAESDTGVIFQRMHANGDVTELKAVS
EEEEEECHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHH
SQVGNTDLCTVLGFSPAHSVATIEHVMAAIYALGLDNVVIEVQGSEMPIMDGSSLPFVEA
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEECCCCCCHHHH
IEQVGLVSLGVKRRYIRITKPVRIEHGGSWSEFRPYDGTRFEVEIDFDCPLIGRQKWAGD
HHHCCHHEECCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCHHCCCH
MTAAVFKAELSRARTFGFMRDVERLWASGHALGSSLENSVVISDDNTVINVEGLRYAKDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEECCCEEEEECCCCHHHHH
FVRHKTLDAVGDLSLASAPFIGCYRSYRGGHKMNANALKALLADPSAYEVVETSTPRQRV
HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCHHEEEECCCCHHHH
AARELIAVSASEFAPWSA
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on carbon-nitrogen bonds, other than peptide bonds; In linear amides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA