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The map label for this gene is yfiO [C]

Identifier: 209550164

GI number: 209550164

Start: 2621999

End: 2622844

Strand: Reverse

Name: yfiO [C]

Synonym: Rleg2_2584

Alternate gene names: 209550164

Gene position: 2622844-2621999 (Counterclockwise)

Preceding gene: 209550165

Following gene: 209550163

Centisome position: 57.8

GC content: 59.69

Gene sequence:

>846_bases
ATGATGAAGACAGCGCGTGCTTTGTTCGCATCGCTTCTGGTGCTCAGCGCAGGCGCCTCGATATCCGGTTGCCAGTCGGA
TCCCGATATCGACATCACCAAGCTCGGCCTCGAAACCGATCCGCCGGATGTGCTCTACACCCAGGGCCTTGCCAACATGA
AGGCCGGCAACATGGCGGAAGCGGCGCGCAAGTTCGACGCCATCGACCGCGAGAACCCGTTCTCCGAATGGGCGCGCAAG
GCGCTTGTAATGAGCACCTTCGTCAAATACCGCCAGGGCCGCCTGGACGATGCGCTTACATCCGGCAACCGCTACATGTC
GCAATATCCGAAATCGCAGGATGCGGCCTATGTGCAGTATCTCATCGGTCTCACCTATTCCAAGCAGATCGTCGACGTGA
CCCAGGATCAGCGCGCCTCGGCCAAGACGATCGAAGCGATGCAGGCCGTCATCGACAATTATCCGAACTCCGAATATGTC
GACGACGCGCAGGCCAAGATCCGCTTTGCGCGCGACCAGCTCGCCGGCAAGGAAATGCAGATCGGCCGCTACTACATGGA
GCGGAAGGAATATCTCGCCGCGATCTCGCGCTTCCGTATTGTCGTCGAGAAATATCCGAATACGAACCAGATCGAAGAGG
CCTTGGCGCGTCTCGTCGAGGCTTATTACGCCATGGGCATCGTCGACGAGGCGCAGACGGCGGCTGCCGTCCTCGGTCAC
AATTATCCCGACAGCCAGTGGTACGCCGATTCCTACAAGCTGCTGCAGACCGGCGGTGCCGAGCCGCGTGAAAACAAGGG
CTCGTGGATCGCTGCGGCAGGCAAGAAACTCCTGCTCGGTTCCTGA

Upstream 100 bases:

>100_bases
GATGCACATTTATGGCTAGAAACGCCAGCGAGGCGTGGCTGCCGTGGAGCGAGCGGCGGCAGTGGGGTTCTTTCGAATGG
GTTATGCAGGATCTGACGGT

Downstream 100 bases:

>100_bases
GGCCAATGCTGATCCAGCTTTCGATCCGCGATATCGTCCTGATCGAGCGGCTGGATCTTGCCTTCGAGACCGGCCTCTCC
GTGCTGACCGGCGAGACCGG

Product: outer membrane assembly lipoprotein YfiO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MMKTARALFASLLVLSAGASISGCQSDPDIDITKLGLETDPPDVLYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARK
ALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYV
DDAQAKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLGH
NYPDSQWYADSYKLLQTGGAEPRENKGSWIAAAGKKLLLGS

Sequences:

>Translated_281_residues
MMKTARALFASLLVLSAGASISGCQSDPDIDITKLGLETDPPDVLYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARK
ALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYV
DDAQAKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLGH
NYPDSQWYADSYKLLQTGGAEPRENKGSWIAAAGKKLLLGS
>Mature_281_residues
MMKTARALFASLLVLSAGASISGCQSDPDIDITKLGLETDPPDVLYTQGLANMKAGNMAEAARKFDAIDRENPFSEWARK
ALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQYLIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYV
DDAQAKIRFARDQLAGKEMQIGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLGH
NYPDSQWYADSYKLLQTGGAEPRENKGSWIAAAGKKLLLGS

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=243, Percent_Identity=24.2798353909465, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31284; Mature: 31284

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTARALFASLLVLSAGASISGCQSDPDIDITKLGLETDPPDVLYTQGLANMKAGNMAE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCHHH
AARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQY
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHH
LIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH
IGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NYPDSQWYADSYKLLQTGGAEPRENKGSWIAAAGKKLLLGS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHCCC
>Mature Secondary Structure
MMKTARALFASLLVLSAGASISGCQSDPDIDITKLGLETDPPDVLYTQGLANMKAGNMAE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCHHH
AARKFDAIDRENPFSEWARKALVMSTFVKYRQGRLDDALTSGNRYMSQYPKSQDAAYVQY
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHCCCCCHHHHHHH
LIGLTYSKQIVDVTQDQRASAKTIEAMQAVIDNYPNSEYVDDAQAKIRFARDQLAGKEMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHH
IGRYYMERKEYLAAISRFRIVVEKYPNTNQIEEALARLVEAYYAMGIVDEAQTAAAVLGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NYPDSQWYADSYKLLQTGGAEPRENKGSWIAAAGKKLLLGS
CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]