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The map label for this gene is yffB [H]

Identifier: 209550103

GI number: 209550103

Start: 2553509

End: 2553997

Strand: Reverse

Name: yffB [H]

Synonym: Rleg2_2520

Alternate gene names: 209550103

Gene position: 2553997-2553509 (Counterclockwise)

Preceding gene: 209550107

Following gene: 209550098

Centisome position: 56.28

GC content: 64.83

Gene sequence:

>489_bases
ATGATCCTGAAAAGCCAGGTCGAGTGGGCGCTCCACTGTTGCGCCATTCTCGCGGGCCTGCCCGAGGGCAGGTATCTCTC
CACCAAGGCGCTCGCGGAGCTTCATGGCCTGCCGAAGGAATATCTCTCCAAGGCGCTGCAGAGCCTTTCGCAGGCATCGC
TGGTCGATACAACGCTCGGCCCGAGCGGCGGTTACAGGCTTGCCAGGCCCTCGTCCGAGATCAATTTCCTCGACATCGTC
GAAGCGGTCGAGGGCAAGGCGCGCAGCTTCACCTGCACGAACATCCGCGACAACAACCCCTGCCGGCCGGCCGGCTATTG
CGACAGCAAGCCCTGCGCGGTCGCCCGCATCATGTGGGAAGCCGACGAGGCCTGGCGCGATACGCTGCGGCGCGTCCGGC
TTTCCGATCTGGTCGGCACCTTGTCCGAGGAAGTACCGGCCGAGCTTTGGCGGAGTACCTTCGAATGGGTGCTCAAGCGC
GCCGGCTGA

Upstream 100 bases:

>100_bases
CGCAACAACTGCTTTTGCAGGTCGTTTACACCATTTCAGTTTGCGGATATGATGTATCCTTAATTCCGTTCGCAGAACCA
GCCATCACGCGAGTTGCTGA

Downstream 100 bases:

>100_bases
TTGCCGGGCCGTGCGTATTATTGGACGTATTGAATCTACGCATCGTGCTAGCCCCTGAAGATTGTCCTGATGGTTTTCAG
AATGGCATGCGCGCTGTGGG

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQASLVDTTLGPSGGYRLARPSSEINFLDIV
EAVEGKARSFTCTNIRDNNPCRPAGYCDSKPCAVARIMWEADEAWRDTLRRVRLSDLVGTLSEEVPAELWRSTFEWVLKR
AG

Sequences:

>Translated_162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQASLVDTTLGPSGGYRLARPSSEINFLDIV
EAVEGKARSFTCTNIRDNNPCRPAGYCDSKPCAVARIMWEADEAWRDTLRRVRLSDLVGTLSEEVPAELWRSTFEWVLKR
AG
>Mature_162_residues
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQASLVDTTLGPSGGYRLARPSSEINFLDIV
EAVEGKARSFTCTNIRDNNPCRPAGYCDSKPCAVARIMWEADEAWRDTLRRVRLSDLVGTLSEEVPAELWRSTFEWVLKR
AG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17983; Mature: 17983

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQASLVDTTLG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PSGGYRLARPSSEINFLDIVEAVEGKARSFTCTNIRDNNPCRPAGYCDSKPCAVARIMWE
CCCCEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
ADEAWRDTLRRVRLSDLVGTLSEEVPAELWRSTFEWVLKRAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILKSQVEWALHCCAILAGLPEGRYLSTKALAELHGLPKEYLSKALQSLSQASLVDTTLG
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
PSGGYRLARPSSEINFLDIVEAVEGKARSFTCTNIRDNNPCRPAGYCDSKPCAVARIMWE
CCCCEEECCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
ADEAWRDTLRRVRLSDLVGTLSEEVPAELWRSTFEWVLKRAG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773380; 11337471 [H]