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The map label for this gene is yrrC [H]

Identifier: 209550097

GI number: 209550097

Start: 2547850

End: 2548977

Strand: Reverse

Name: yrrC [H]

Synonym: Rleg2_2514

Alternate gene names: 209550097

Gene position: 2548977-2547850 (Counterclockwise)

Preceding gene: 209550098

Following gene: 209550095

Centisome position: 56.17

GC content: 61.17

Gene sequence:

>1128_bases
ATGCAATTTGCGCCGCAACAAGACGAAGCCCTCAAGGCTGTTTCGAAATGGCTGAATGAAGGGCGCTCGCCGCTCTTTCG
CCTGTTCGGCTATGCCGGAACGGGGAAGACGACGCTTGCCAAGCATTTCGCCGAGAATGTCGACGGCGACGTGCTGTTTG
CAGCCTTCACCGGTAAGGCCGCACAAGTGCTGCGCTCGCGCGGCGCTTCCAACGCCAAGACGATCCATTCGCTGATCTAC
CGCCCACGCGGCGAGGAGGCGGTGGAGGACGAGGAAACTGGCAAGACCTCGATCGCACCGATGTTTTCGATCAACCGGCA
AAGCCCGGTCGCCAAGGCGGCGCTGATCATCGTCGACGAATGCTCGATGGTGGACGAGGCTCTCGGCAGGGATCTGATGA
GCTTCGGCACGCCGATCCTGGTGCTCGGCGACCCCGGCCAGCTGCCGCCGGTCAGCGGCGGCGGTTACTTCACCAATCAG
GATCCGGATTATCTGCTCACCGATATTCACCGGCAGGCCCGTGACAATCCGATCATCAAGCTCGCCATGCAGGTGCGCGA
GGGCAATGAGGTAATGTACGGCGACTACGGCACGGCCAAGGTGATCTCGAAGAACGAGGTGACGCAGGATCTCGTGATGA
AAGCCGACCAGGTACTCGTCGGCACCAACAGGACGCGGCGGCGCTACAATCAGCGCCTGCGCGAGTTGAAAGGCTTCAAT
GCCGAGTATCCGCAGACCGGCGACAAGCTCGTCTGCCTCCGCAACGATCCGGCCAAGGGCCTGCTCAACGGCTCGCTCTG
GCAGGTGATGACCTCGTCCAAGGAAACGACGAAGCCCGGCATCAATCTTCTCGTCCGGCCCGAAGACGACGACATGGATC
GGGGAGCCGCCAAGATCAAGCTCCTCAAACAGGCCTTCGAGGATGTCGAAGGGGAAATCCCCTGGAATACCCGCAAGCGC
TACGACGAGTTCGACTACGGCTATGCGCTGACAGTTCACAAGGCGCAGGGTTCACAATGGAACGACGTCGTGCTCTTCGA
CGAGAGCTGGGCGTTTCGCGATACGCGGGAACGCTGGCTTTATACGGCGATCACACGCGCGGCGGAGACGCTGACGATCG
TGCGCTGA

Upstream 100 bases:

>100_bases
AGCGGCATGGGCTGGCAACAGAACGGATGATTGTCTCACCGGGCGATTTGCGGTTTTCCGCCTTGCCTAACGCCTGCGAA
TCCTGCCAAGTCGTCCGATC

Downstream 100 bases:

>100_bases
TAGGATTGGCGGGAGGCGACGGTGGCGGCCGTCGAGAGCGTGGGCCAGGTTGTCTGCGGCGCCGTCAGGCGTTCAAGGTT
ACGCCTGCACGATGCCGAGC

Product: exodeoxyribonuclease V protein, subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MQFAPQQDEALKAVSKWLNEGRSPLFRLFGYAGTGKTTLAKHFAENVDGDVLFAAFTGKAAQVLRSRGASNAKTIHSLIY
RPRGEEAVEDEETGKTSIAPMFSINRQSPVAKAALIIVDECSMVDEALGRDLMSFGTPILVLGDPGQLPPVSGGGYFTNQ
DPDYLLTDIHRQARDNPIIKLAMQVREGNEVMYGDYGTAKVISKNEVTQDLVMKADQVLVGTNRTRRRYNQRLRELKGFN
AEYPQTGDKLVCLRNDPAKGLLNGSLWQVMTSSKETTKPGINLLVRPEDDDMDRGAAKIKLLKQAFEDVEGEIPWNTRKR
YDEFDYGYALTVHKAQGSQWNDVVLFDESWAFRDTRERWLYTAITRAAETLTIVR

Sequences:

>Translated_375_residues
MQFAPQQDEALKAVSKWLNEGRSPLFRLFGYAGTGKTTLAKHFAENVDGDVLFAAFTGKAAQVLRSRGASNAKTIHSLIY
RPRGEEAVEDEETGKTSIAPMFSINRQSPVAKAALIIVDECSMVDEALGRDLMSFGTPILVLGDPGQLPPVSGGGYFTNQ
DPDYLLTDIHRQARDNPIIKLAMQVREGNEVMYGDYGTAKVISKNEVTQDLVMKADQVLVGTNRTRRRYNQRLRELKGFN
AEYPQTGDKLVCLRNDPAKGLLNGSLWQVMTSSKETTKPGINLLVRPEDDDMDRGAAKIKLLKQAFEDVEGEIPWNTRKR
YDEFDYGYALTVHKAQGSQWNDVVLFDESWAFRDTRERWLYTAITRAAETLTIVR
>Mature_375_residues
MQFAPQQDEALKAVSKWLNEGRSPLFRLFGYAGTGKTTLAKHFAENVDGDVLFAAFTGKAAQVLRSRGASNAKTIHSLIY
RPRGEEAVEDEETGKTSIAPMFSINRQSPVAKAALIIVDECSMVDEALGRDLMSFGTPILVLGDPGQLPPVSGGGYFTNQ
DPDYLLTDIHRQARDNPIIKLAMQVREGNEVMYGDYGTAKVISKNEVTQDLVMKADQVLVGTNRTRRRYNQRLRELKGFN
AEYPQTGDKLVCLRNDPAKGLLNGSLWQVMTSSKETTKPGINLLVRPEDDDMDRGAAKIKLLKQAFEDVEGEIPWNTRKR
YDEFDYGYALTVHKAQGSQWNDVVLFDESWAFRDTRERWLYTAITRAAETLTIVR

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006345 [H]

Pfam domain/function: NA

EC number: 3.1.11.5

Molecular weight: Translated: 42035; Mature: 42035

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFAPQQDEALKAVSKWLNEGRSPLFRLFGYAGTGKTTLAKHFAENVDGDVLFAAFTGKA
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHH
AQVLRSRGASNAKTIHSLIYRPRGEEAVEDEETGKTSIAPMFSINRQSPVAKAALIIVDE
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCEECCEEECCCCCCCHHEEEEEEHH
CSMVDEALGRDLMSFGTPILVLGDPGQLPPVSGGGYFTNQDPDYLLTDIHRQARDNPIIK
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
LAMQVREGNEVMYGDYGTAKVISKNEVTQDLVMKADQVLVGTNRTRRRYNQRLRELKGFN
EEEEECCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCC
AEYPQTGDKLVCLRNDPAKGLLNGSLWQVMTSSKETTKPGINLLVRPEDDDMDRGAAKIK
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHH
LLKQAFEDVEGEIPWNTRKRYDEFDYGYALTVHKAQGSQWNDVVLFDESWAFRDTRERWL
HHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHH
YTAITRAAETLTIVR
HHHHHHHHHHEEECC
>Mature Secondary Structure
MQFAPQQDEALKAVSKWLNEGRSPLFRLFGYAGTGKTTLAKHFAENVDGDVLFAAFTGKA
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCHH
AQVLRSRGASNAKTIHSLIYRPRGEEAVEDEETGKTSIAPMFSINRQSPVAKAALIIVDE
HHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCEECCEEECCCCCCCHHEEEEEEHH
CSMVDEALGRDLMSFGTPILVLGDPGQLPPVSGGGYFTNQDPDYLLTDIHRQARDNPIIK
HHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEE
LAMQVREGNEVMYGDYGTAKVISKNEVTQDLVMKADQVLVGTNRTRRRYNQRLRELKGFN
EEEEECCCCEEEECCCCCEEEECHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCC
AEYPQTGDKLVCLRNDPAKGLLNGSLWQVMTSSKETTKPGINLLVRPEDDDMDRGAAKIK
CCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHH
LLKQAFEDVEGEIPWNTRKRYDEFDYGYALTVHKAQGSQWNDVVLFDESWAFRDTRERWL
HHHHHHHHCCCCCCCCHHHCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHH
YTAITRAAETLTIVR
HHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]