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The map label for this gene is yvrB [H]

Identifier: 209549861

GI number: 209549861

Start: 2330436

End: 2331476

Strand: Reverse

Name: yvrB [H]

Synonym: Rleg2_2274

Alternate gene names: 209549861

Gene position: 2331476-2330436 (Counterclockwise)

Preceding gene: 209549862

Following gene: 209549860

Centisome position: 51.38

GC content: 66.19

Gene sequence:

>1041_bases
GTGAAGGCAGTGTCGCTCAGGCAACAGGGATGGTGGGCGCTTGGCGCGCTCACCATTTCAGCCATTCTCCTTCTCGGACT
GATGATCAGCCTTGCCGTTTCGATCGGCGAGATCGCGATCCCGCTAGCGACGACGGCGGAGGCGGTGTCGAACCGGCTTT
TCGGAACGCAATTCGAGCTCAGCCGCATCCACCAGGGCATCGTCTGGGATTATCGATTGAGCCGGGCGCTGGTTGCGGCG
AGCGCCGGCGCGTCGCTCTCGCTCTGCGGCGCCGTCCTGCAGGCGCTGCTGCGCAATCCGCTGGCCGAGCCCTATGTGCT
CGGCATCTCCGCCGGCGCCTCGACGGGAGCCGTCTGCGTGATGATCCTCGGCCTCGGCTACGGTGTTCTCGGCCTGTCCA
GCGGCGCCTTCATCGGCGCGGTCATTGCCTTTCTGCTGGTCGGCTTCCTTGCGACGGGTGCGGGAGGAACCGGCGAGCGC
ATCATCCTGTGCGGTGTTGCCGGTTCGCAGCTCTTCAATGCGCTGACCTCCTACATCGTGACGACATCGGCGAATGCCGA
GCAGGCGCGCGGTATTCTGTTCTGGCTTCTGGGTTCGCTCAGCGGCGTGCGATGGCCGGATGTCTATATCTCGGTGCCGA
TCGCGTTTGCCGGTTTCCTCATCTGCATGGCCCATGTCCGGGCGCTCGATGCTTTCGCCTTCGGCACGGATGCGGCCGCC
TCGCTCGGCATTGCCGTGCGCCGCGTTCAGATCCTGCTGTTCGGCCTGACGGCGGCGATGACGGCGAGCGTCGTCAGCAT
GGTGGGCTCGATCGGCTTCGTCGGCCTGGTCATTCCGCATGCGGCCCGCTTCCTCGTCGGACCGGGCCATCGGCGGCTGC
TGCCGGCAACGGCGCTCGGCGGCGCGATCTACATGGTCGGCGCCGATATCGTCTCGCGCATCATCATCCCGCAGCAGGTC
CTGCCGATCGGCGTCGTCACGGCGCTCTTCGCCGCACCGGCCTTCGCCGTCATCCTCTATCGCGTACGGAGAAGCGCATG
A

Upstream 100 bases:

>100_bases
ACTTCGTGATGATGGACGCGCAATCGATGAACCCGACGATCCGGACGATCGACGGCATCGAGACCTTGGCGAAGGGCATC
AAATCCTTCGGCCTGTCGCA

Downstream 100 bases:

>100_bases
GCATTACCATCGACGCGGTGAGTTTCGCCGCCGGCGACACGGTCATCGTCAACGGCGTCAGCCTGACGGTGACAAAGGGC
AAGGTTCTCGGTCTGCTCGG

Product: transporter permease

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MKAVSLRQQGWWALGALTISAILLLGLMISLAVSIGEIAIPLATTAEAVSNRLFGTQFELSRIHQGIVWDYRLSRALVAA
SAGASLSLCGAVLQALLRNPLAEPYVLGISAGASTGAVCVMILGLGYGVLGLSSGAFIGAVIAFLLVGFLATGAGGTGER
IILCGVAGSQLFNALTSYIVTTSANAEQARGILFWLLGSLSGVRWPDVYISVPIAFAGFLICMAHVRALDAFAFGTDAAA
SLGIAVRRVQILLFGLTAAMTASVVSMVGSIGFVGLVIPHAARFLVGPGHRRLLPATALGGAIYMVGADIVSRIIIPQQV
LPIGVVTALFAAPAFAVILYRVRRSA

Sequences:

>Translated_346_residues
MKAVSLRQQGWWALGALTISAILLLGLMISLAVSIGEIAIPLATTAEAVSNRLFGTQFELSRIHQGIVWDYRLSRALVAA
SAGASLSLCGAVLQALLRNPLAEPYVLGISAGASTGAVCVMILGLGYGVLGLSSGAFIGAVIAFLLVGFLATGAGGTGER
IILCGVAGSQLFNALTSYIVTTSANAEQARGILFWLLGSLSGVRWPDVYISVPIAFAGFLICMAHVRALDAFAFGTDAAA
SLGIAVRRVQILLFGLTAAMTASVVSMVGSIGFVGLVIPHAARFLVGPGHRRLLPATALGGAIYMVGADIVSRIIIPQQV
LPIGVVTALFAAPAFAVILYRVRRSA
>Mature_346_residues
MKAVSLRQQGWWALGALTISAILLLGLMISLAVSIGEIAIPLATTAEAVSNRLFGTQFELSRIHQGIVWDYRLSRALVAA
SAGASLSLCGAVLQALLRNPLAEPYVLGISAGASTGAVCVMILGLGYGVLGLSSGAFIGAVIAFLLVGFLATGAGGTGER
IILCGVAGSQLFNALTSYIVTTSANAEQARGILFWLLGSLSGVRWPDVYISVPIAFAGFLICMAHVRALDAFAFGTDAAA
SLGIAVRRVQILLFGLTAAMTASVVSMVGSIGFVGLVIPHAARFLVGPGHRRLLPATALGGAIYMVGADIVSRIIIPQQV
LPIGVVTALFAAPAFAVILYRVRRSA

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=295, Percent_Identity=36.271186440678, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1788004, Length=280, Percent_Identity=37.1428571428571, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1786805, Length=291, Percent_Identity=38.1443298969072, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=33.9160839160839, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1786804, Length=279, Percent_Identity=30.8243727598566, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786347, Length=281, Percent_Identity=32.0284697508897, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35648; Mature: 35648

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVSLRQQGWWALGALTISAILLLGLMISLAVSIGEIAIPLATTAEAVSNRLFGTQFEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
SRIHQGIVWDYRLSRALVAASAGASLSLCGAVLQALLRNPLAEPYVLGISAGASTGAVCV
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
MILGLGYGVLGLSSGAFIGAVIAFLLVGFLATGAGGTGERIILCGVAGSQLFNALTSYIV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
TTSANAEQARGILFWLLGSLSGVRWPDVYISVPIAFAGFLICMAHVRALDAFAFGTDAAA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SLGIAVRRVQILLFGLTAAMTASVVSMVGSIGFVGLVIPHAARFLVGPGHRRLLPATALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
GAIYMVGADIVSRIIIPQQVLPIGVVTALFAAPAFAVILYRVRRSA
CCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKAVSLRQQGWWALGALTISAILLLGLMISLAVSIGEIAIPLATTAEAVSNRLFGTQFEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH
SRIHQGIVWDYRLSRALVAASAGASLSLCGAVLQALLRNPLAEPYVLGISAGASTGAVCV
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
MILGLGYGVLGLSSGAFIGAVIAFLLVGFLATGAGGTGERIILCGVAGSQLFNALTSYIV
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHH
TTSANAEQARGILFWLLGSLSGVRWPDVYISVPIAFAGFLICMAHVRALDAFAFGTDAAA
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
SLGIAVRRVQILLFGLTAAMTASVVSMVGSIGFVGLVIPHAARFLVGPGHRRLLPATALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHC
GAIYMVGADIVSRIIIPQQVLPIGVVTALFAAPAFAVILYRVRRSA
CCCEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]