| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209549843
Identifier: 209549843
GI number: 209549843
Start: 2311610
End: 2313100
Strand: Reverse
Name: 209549843
Synonym: Rleg2_2256
Alternate gene names: NA
Gene position: 2313100-2311610 (Counterclockwise)
Preceding gene: 209549844
Following gene: 209549840
Centisome position: 50.97
GC content: 59.09
Gene sequence:
>1491_bases ATGACAGTCTATTATGTGAACTCGGCGACAGGCGCCAACAACAACAGCGGCACGAGCGAGGATGCGCCTTTTGCATCCTT CTGGGCGGTGGAAAATTTGAAGCTGCAGCCCGGCGACACCGTGCTGCTCGCCGCCGGAAGCGTTTATAACGATCAGCTCG ACCTGAAATATTCCGGCACCGCCAGCGCCCCGATCACCATCGGCAGCTACGGGATCGGCGATGCGCCGGTCATCCATAGT CCAGGCGACGGCATTCACAGCCTTTATGCCTCGAACATCGTCATCGAGAACATCAAGATCTCGGATACCGGCGGTGCCGC CATCTATGGCGGTTATGTTTCGAACTGGACGGTGCGCAATGTCGAGGTCGATCACACCGGTTTGGCGGGCAAGTCCGGTT CCGTCACCTTCCGGACGGGCTCGAACATCACCATCGAAAACAGCACGATCAACGACGTGAATGGCGACGGCGTCTGGATC GAGAAGATCAACGGCGTCACCCTTCTCAACAATACCGTCACCAATGCGCACGGCACCACGGCAGATGCCGTGCAGATGAA CGACAGCAGCAACATCCTGATCAGCGGCAATTATCTCGACCAGACGGGCGCCGTTAGCCCGAAAGGCGTGCTGGCGCTCG TCCGGCCTGTGAATGCCGTGATCGAGGACAATACGCTGGTTGGCGGCGGCTTCGGGGTGGCCGCCCAGGCGGGCACGAAT ATCGCCATCCACGACAACGACATATCGGGATATGGCGGCTACAGCTGGTCCTACGCCGTCGGTCTCGGCGACCAGGGCGA TACGAGGGACTATGATATCTCAGGCAACTACATCCATGACGGCGTATGGGGCGTGGTGGTCAGCTCTGCCGGCACCACCA GTTACGTTCGCGAAGATATCGACGTCCACAACAACGTTTTCGACGACCTTTCGCAGGCGGCGCTCAAGGTCGACAGGCCT GCATCCGGGGCTTTCCACGACAATGTCATCGCCAGCGATGTGACGCCGTACAGCATATCGCCCGCCATCATCGCCGCGAA CACCTTTCCCGTCAGCAACAATACGACGCTCGAGGAGGCTGACGCCCTGTTTGTCAGCCTTGATAGTCACGTTGCCGGCG ATACAACGCATGTGGGCGCGGCCCCGATAATTGTCGCGGCCCACGACAGCTTGAAAATCTCAGCCGACACGGATGGCGCC CATCATGGCAATCTCTTGGAAAACGACAGTTCGGCCAATGGGATCCTGCTGCTTCGCCGCTTCGAGGGTGAGGTCGTCGG CAAGAACGGTCTGACGCTGACCGGCCAATACGGCACCATCCATGTCGACGATCACGGCGACTACAGCTACACGCTCGATG CGGCGAAGCTCGCCGGCGTTAGTGCAGATGTGAGCGAGACGTTCCACTATAAGATCTCCGATGGGGCTGCGCATCATTTC GATACGGATACGCTGAGCATCTCCATCGATGTGGATGGCGTGCTGATCTGA
Upstream 100 bases:
>100_bases AATCGAAGATTGTCCTATGGCCTTTCGCCCCGACCGCATCCGATCCACTCATCGCAGCTGATCCCCAAACAGCTGCGCGA CAATGCGAGCATATGGCGAT
Downstream 100 bases:
>100_bases CAGAGTACCGGCAGCAGCTCATCGGCCGCCAAACAGGATCCTGGTGACGTCGATTTCGATTTCGGCGCAGATGATCTCGT ATTCGGTGACGATCGCCGGG
Product: carbohydrate-binding and sugar hydrolysis protein
Products: NA
Alternate protein names: Polysaccharidase
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MTVYYVNSATGANNNSGTSEDAPFASFWAVENLKLQPGDTVLLAAGSVYNDQLDLKYSGTASAPITIGSYGIGDAPVIHS PGDGIHSLYASNIVIENIKISDTGGAAIYGGYVSNWTVRNVEVDHTGLAGKSGSVTFRTGSNITIENSTINDVNGDGVWI EKINGVTLLNNTVTNAHGTTADAVQMNDSSNILISGNYLDQTGAVSPKGVLALVRPVNAVIEDNTLVGGGFGVAAQAGTN IAIHDNDISGYGGYSWSYAVGLGDQGDTRDYDISGNYIHDGVWGVVVSSAGTTSYVREDIDVHNNVFDDLSQAALKVDRP ASGAFHDNVIASDVTPYSISPAIIAANTFPVSNNTTLEEADALFVSLDSHVAGDTTHVGAAPIIVAAHDSLKISADTDGA HHGNLLENDSSANGILLLRRFEGEVVGKNGLTLTGQYGTIHVDDHGDYSYTLDAAKLAGVSADVSETFHYKISDGAAHHF DTDTLSISIDVDGVLI
Sequences:
>Translated_496_residues MTVYYVNSATGANNNSGTSEDAPFASFWAVENLKLQPGDTVLLAAGSVYNDQLDLKYSGTASAPITIGSYGIGDAPVIHS PGDGIHSLYASNIVIENIKISDTGGAAIYGGYVSNWTVRNVEVDHTGLAGKSGSVTFRTGSNITIENSTINDVNGDGVWI EKINGVTLLNNTVTNAHGTTADAVQMNDSSNILISGNYLDQTGAVSPKGVLALVRPVNAVIEDNTLVGGGFGVAAQAGTN IAIHDNDISGYGGYSWSYAVGLGDQGDTRDYDISGNYIHDGVWGVVVSSAGTTSYVREDIDVHNNVFDDLSQAALKVDRP ASGAFHDNVIASDVTPYSISPAIIAANTFPVSNNTTLEEADALFVSLDSHVAGDTTHVGAAPIIVAAHDSLKISADTDGA HHGNLLENDSSANGILLLRRFEGEVVGKNGLTLTGQYGTIHVDDHGDYSYTLDAAKLAGVSADVSETFHYKISDGAAHHF DTDTLSISIDVDGVLI >Mature_495_residues TVYYVNSATGANNNSGTSEDAPFASFWAVENLKLQPGDTVLLAAGSVYNDQLDLKYSGTASAPITIGSYGIGDAPVIHSP GDGIHSLYASNIVIENIKISDTGGAAIYGGYVSNWTVRNVEVDHTGLAGKSGSVTFRTGSNITIENSTINDVNGDGVWIE KINGVTLLNNTVTNAHGTTADAVQMNDSSNILISGNYLDQTGAVSPKGVLALVRPVNAVIEDNTLVGGGFGVAAQAGTNI AIHDNDISGYGGYSWSYAVGLGDQGDTRDYDISGNYIHDGVWGVVVSSAGTTSYVREDIDVHNNVFDDLSQAALKVDRPA SGAFHDNVIASDVTPYSISPAIIAANTFPVSNNTTLEEADALFVSLDSHVAGDTTHVGAAPIIVAAHDSLKISADTDGAH HGNLLENDSSANGILLLRRFEGEVVGKNGLTLTGQYGTIHVDDHGDYSYTLDAAKLAGVSADVSETFHYKISDGAAHHFD TDTLSISIDVDGVLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51627; Mature: 51496
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYYVNSATGANNNSGTSEDAPFASFWAVENLKLQPGDTVLLAAGSVYNDQLDLKYSGT CEEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEECCCCEEEEEECCEECCEEEEEECCC ASAPITIGSYGIGDAPVIHSPGDGIHSLYASNIVIENIKISDTGGAAIYGGYVSNWTVRN CCCCEEEECCCCCCCCEEECCCCCHHHHEECCEEEEEEEEECCCCCEEECCEECCEEEEE VEVDHTGLAGKSGSVTFRTGSNITIENSTINDVNGDGVWIEKINGVTLLNNTVTNAHGTT EEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCC ADAVQMNDSSNILISGNYLDQTGAVSPKGVLALVRPVNAVIEDNTLVGGGFGVAAQAGTN EEEEEECCCCCEEEECCEECCCCCCCCCCEEEEEECCEEEEECCEEEECCCCEEECCCCE IAIHDNDISGYGGYSWSYAVGLGDQGDTRDYDISGNYIHDGVWGVVVSSAGTTSYVREDI EEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEECCEEEEEEECCCCHHHHHHHH DVHNNVFDDLSQAALKVDRPASGAFHDNVIASDVTPYSISPAIIAANTFPVSNNTTLEEA HHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCHHCC DALFVSLDSHVAGDTTHVGAAPIIVAAHDSLKISADTDGAHHGNLLENDSSANGILLLRR CEEEEEECCCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCCCEECCCCCCCCEEEEEE FEGEVVGKNGLTLTGQYGTIHVDDHGDYSYTLDAAKLAGVSADVSETFHYKISDGAAHHF ECCEEECCCCCEEEECCCEEEEECCCCEEEEECHHHHCCCCCCCCCEEEEEECCCCCEEE DTDTLSISIDVDGVLI CCCEEEEEEECCEEEC >Mature Secondary Structure TVYYVNSATGANNNSGTSEDAPFASFWAVENLKLQPGDTVLLAAGSVYNDQLDLKYSGT EEEEEECCCCCCCCCCCCCCCCCEEEEEEECEEECCCCEEEEEECCEECCEEEEEECCC ASAPITIGSYGIGDAPVIHSPGDGIHSLYASNIVIENIKISDTGGAAIYGGYVSNWTVRN CCCCEEEECCCCCCCCEEECCCCCHHHHEECCEEEEEEEEECCCCCEEECCEECCEEEEE VEVDHTGLAGKSGSVTFRTGSNITIENSTINDVNGDGVWIEKINGVTLLNNTVTNAHGTT EEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCEEEEEEECCEEEEECCCCCCCCCC ADAVQMNDSSNILISGNYLDQTGAVSPKGVLALVRPVNAVIEDNTLVGGGFGVAAQAGTN EEEEEECCCCCEEEECCEECCCCCCCCCCEEEEEECCEEEEECCEEEECCCCEEECCCCE IAIHDNDISGYGGYSWSYAVGLGDQGDTRDYDISGNYIHDGVWGVVVSSAGTTSYVREDI EEEECCCCCCCCCCEEEEEEECCCCCCCCEEECCCCEEECCEEEEEEECCCCHHHHHHHH DVHNNVFDDLSQAALKVDRPASGAFHDNVIASDVTPYSISPAIIAANTFPVSNNTTLEEA HHHHHHHHHHHHHHEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEECCCCCCHHCC DALFVSLDSHVAGDTTHVGAAPIIVAAHDSLKISADTDGAHHGNLLENDSSANGILLLRR CEEEEEECCCCCCCCEECCCCEEEEEECCCEEEEECCCCCCCCCEECCCCCCCCEEEEEE FEGEVVGKNGLTLTGQYGTIHVDDHGDYSYTLDAAKLAGVSADVSETFHYKISDGAAHHF ECCEEECCCCCEEEECCCEEEEECCCCEEEEECHHHHCCCCCCCCCEEEEEECCCCCEEE DTDTLSISIDVDGVLI CCCEEEEEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA