Click here to switch to the map view.

The map label for this gene is ybfA [H]

Identifier: 209549815

GI number: 209549815

Start: 2281991

End: 2282866

Strand: Reverse

Name: ybfA [H]

Synonym: Rleg2_2226

Alternate gene names: 209549815

Gene position: 2282866-2281991 (Counterclockwise)

Preceding gene: 209549818

Following gene: 209549812

Centisome position: 50.31

GC content: 61.53

Gene sequence:

>876_bases
ATGACGTGTGATCCAATCGCTCGCGTTCGTCGCTTCAACCGTGCCGTCACATCCGAAGTCGGCGCTCTCGACAGCTCGTT
CCTCGGACGCGGACGGCCGCTGGGGGCTGCGCGGGTGCTCAATTCGATCGGCCGGGGACAATCGGATGTTGCGGTGATCC
GCGATTGTCTGGGCCTCGACTCGGGCTTGATGAGCCGTCTGCTGCGCAGCCTGGAAGAGGAGGGTCTCATCGAGACGGTG
CCGAACGCCGAGGATGCACGTCGCCGCATCGTCAGATTGACCGAAAACGGCCGGTCCGAGTTTCAGGCCTATGAAGCGCT
TTCCAATGCGCAGGCGGAAGGATTTCTGGCGCGCCATCGCCGCCCGGAAGAACTTCTGCGCGCGATGGATATGATTGCTT
CCTCGCTGAAGCGCGACCAGATTGTGATCGAGGAGACGGACCCTCGGCACGAGGATGCCCGCTATTGCCTGAGTGAATAT
TACGGTGAACTCGCACGCCGCTTCGAGAAGGGTTTCGATGTGTCGCTGTCCCGCGATCCCGATGCCAAGGATATGATCCG
TCCGCGCGGTGCGTTTCTGGTGGCCATGTCCGATGGCCTGCCGATCGGCTGCGTCGGATTGAAGGGCGGTGGCGGCGAGG
TCGCGGAGATCAAGAGATTATGGGTCGCCCCATCCGCGCGTGGCTTGGGGCTTGCAACACGCCTGATGACGGCCGTTGAG
ACCATCGCCGGCGAACTGTCCGTCAAGCTCCTGCGCCTGGATACGAACGGCGCGCTTTCCGAGGCGCAACAGCTTTATCG
CGGAAGCGGCTGGGTCGAGATCGACCGTTTCAATGACGACCCATATCCCGACACGTTCTTTGAAAAACGCCTTTAA

Upstream 100 bases:

>100_bases
TGATGATCGGCAAGGTGGCTGCAAGCCTCCGACCGGCCATATGCCTGCTTTTAAGTGCTCTGAATTGACAGAGATAATTA
TCTGACTTAAGTCAGGTAAT

Downstream 100 bases:

>100_bases
GCGTTGCGAAGCAGCGGCGCGGCTGATGCGTGGCGGCGAGGGATTTCGGTCGGGGTCTACTGGTAGTCCAGCTGCTTCGA
CAGCTCGGCTAAAAGCCTGT

Product: MarR family transcriptional regulator with acetyltransferase activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTCDPIARVRRFNRAVTSEVGALDSSFLGRGRPLGAARVLNSIGRGQSDVAVIRDCLGLDSGLMSRLLRSLEEEGLIETV
PNAEDARRRIVRLTENGRSEFQAYEALSNAQAEGFLARHRRPEELLRAMDMIASSLKRDQIVIEETDPRHEDARYCLSEY
YGELARRFEKGFDVSLSRDPDAKDMIRPRGAFLVAMSDGLPIGCVGLKGGGGEVAEIKRLWVAPSARGLGLATRLMTAVE
TIAGELSVKLLRLDTNGALSEAQQLYRGSGWVEIDRFNDDPYPDTFFEKRL

Sequences:

>Translated_291_residues
MTCDPIARVRRFNRAVTSEVGALDSSFLGRGRPLGAARVLNSIGRGQSDVAVIRDCLGLDSGLMSRLLRSLEEEGLIETV
PNAEDARRRIVRLTENGRSEFQAYEALSNAQAEGFLARHRRPEELLRAMDMIASSLKRDQIVIEETDPRHEDARYCLSEY
YGELARRFEKGFDVSLSRDPDAKDMIRPRGAFLVAMSDGLPIGCVGLKGGGGEVAEIKRLWVAPSARGLGLATRLMTAVE
TIAGELSVKLLRLDTNGALSEAQQLYRGSGWVEIDRFNDDPYPDTFFEKRL
>Mature_290_residues
TCDPIARVRRFNRAVTSEVGALDSSFLGRGRPLGAARVLNSIGRGQSDVAVIRDCLGLDSGLMSRLLRSLEEEGLIETVP
NAEDARRRIVRLTENGRSEFQAYEALSNAQAEGFLARHRRPEELLRAMDMIASSLKRDQIVIEETDPRHEDARYCLSEYY
GELARRFEKGFDVSLSRDPDAKDMIRPRGAFLVAMSDGLPIGCVGLKGGGGEVAEIKRLWVAPSARGLGLATRLMTAVET
IAGELSVKLLRLDTNGALSEAQQLYRGSGWVEIDRFNDDPYPDTFFEKRL

Specific function: Putative DNA-binding acetyltransferase (Potential) [H]

COG id: COG0454

COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 32263; Mature: 32132

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCDPIARVRRFNRAVTSEVGALDSSFLGRGRPLGAARVLNSIGRGQSDVAVIRDCLGLD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
SGLMSRLLRSLEEEGLIETVPNAEDARRRIVRLTENGRSEFQAYEALSNAQAEGFLARHR
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
RPEELLRAMDMIASSLKRDQIVIEETDPRHEDARYCLSEYYGELARRFEKGFDVSLSRDP
CHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAKDMIRPRGAFLVAMSDGLPIGCVGLKGGGGEVAEIKRLWVAPSARGLGLATRLMTAVE
CHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TIAGELSVKLLRLDTNGALSEAQQLYRGSGWVEIDRFNDDPYPDTFFEKRL
HHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCC
>Mature Secondary Structure 
TCDPIARVRRFNRAVTSEVGALDSSFLGRGRPLGAARVLNSIGRGQSDVAVIRDCLGLD
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC
SGLMSRLLRSLEEEGLIETVPNAEDARRRIVRLTENGRSEFQAYEALSNAQAEGFLARHR
HHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
RPEELLRAMDMIASSLKRDQIVIEETDPRHEDARYCLSEYYGELARRFEKGFDVSLSRDP
CHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DAKDMIRPRGAFLVAMSDGLPIGCVGLKGGGGEVAEIKRLWVAPSARGLGLATRLMTAVE
CHHHHHCCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
TIAGELSVKLLRLDTNGALSEAQQLYRGSGWVEIDRFNDDPYPDTFFEKRL
HHHHHHEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]