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The map label for this gene is ygiX [C]

Identifier: 209549806

GI number: 209549806

Start: 2275914

End: 2276585

Strand: Reverse

Name: ygiX [C]

Synonym: Rleg2_2217

Alternate gene names: 209549806

Gene position: 2276585-2275914 (Counterclockwise)

Preceding gene: 209549808

Following gene: 209549805

Centisome position: 50.17

GC content: 62.35

Gene sequence:

>672_bases
ATGCGGATATTGTTGATAGAAGACGAGAGGGAGTTGGCCAAGGCGCTGTCGGCAGCGCTCGGCAAACATGGGATTGTCAC
CGACCACACGATGCATCTGGCCGATGCCGTCGAGCTTACGCGGCAGAACCTCTATGACGCGATCCTGCTCGACCGGCGCC
TGCCCGATGGAGAGGGGCTGAGCTTCATTCCGCAGCTGAGGCGGACGGGCAAGGATACGCCGATCATCGTGCTGACGGCG
CTGAATGAGCCTAAGGAGCGGGTGGAAGGGCTCGATCTCGGCTCCGACGATTATCTTGGCAAGCCGTTTCTGGTGGAGGA
GCTGATGGCGCGGCTGAGAGCCGTGCTGCGGCGGCCGCCGAACCTTGCCGAACTCAAGATTACCGCCGGGCGGATGGTGA
TCGATCCTTTGCATCTCAGCGTAACGGTCGATGACGCGCCGCTCGATCTGCCCCGGCGCGAGCTTCTGGTGCTGGCGGCC
CTTGCCAAGCGCAAGGAGAAGACCGTGCTGCGTGCGACGCTCGAGGCGGCCGTCTACAACTACGAAGAGGAAATCCAGTC
GAATGCGCTCGATGCGCACATTTCGCGACTGCGCAGGCGGCTTGCCGAGGCCGGCGCCGAGGTTTCGATCCACAATATCC
GCGGCGTCGGCTATCTCCTGAAGGAAGAATGA

Upstream 100 bases:

>100_bases
CCCAACAATTGCGGCAGCATGACCGGCTGCCTTGCAAGCTCCGCAATGCTGCCGCAACCCTTGTGGCGGACAGAGGGAAG
GTTACGAGAACAGGCGGGCG

Downstream 100 bases:

>100_bases
TGGGCGAAAAACGCAAGCCTAACCCTTCGCTCTGGTGGCGGCTCAGCTGGCAGCTCAGCCTGGTCTTCGTCGGCGTGGTG
ACGGCTGTCACCATCGGGCT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRILLIEDERELAKALSAALGKHGIVTDHTMHLADAVELTRQNLYDAILLDRRLPDGEGLSFIPQLRRTGKDTPIIVLTA
LNEPKERVEGLDLGSDDYLGKPFLVEELMARLRAVLRRPPNLAELKITAGRMVIDPLHLSVTVDDAPLDLPRRELLVLAA
LAKRKEKTVLRATLEAAVYNYEEEIQSNALDAHISRLRRRLAEAGAEVSIHNIRGVGYLLKEE

Sequences:

>Translated_223_residues
MRILLIEDERELAKALSAALGKHGIVTDHTMHLADAVELTRQNLYDAILLDRRLPDGEGLSFIPQLRRTGKDTPIIVLTA
LNEPKERVEGLDLGSDDYLGKPFLVEELMARLRAVLRRPPNLAELKITAGRMVIDPLHLSVTVDDAPLDLPRRELLVLAA
LAKRKEKTVLRATLEAAVYNYEEEIQSNALDAHISRLRRRLAEAGAEVSIHNIRGVGYLLKEE
>Mature_223_residues
MRILLIEDERELAKALSAALGKHGIVTDHTMHLADAVELTRQNLYDAILLDRRLPDGEGLSFIPQLRRTGKDTPIIVLTA
LNEPKERVEGLDLGSDDYLGKPFLVEELMARLRAVLRRPPNLAELKITAGRMVIDPLHLSVTVDDAPLDLPRRELLVLAA
LAKRKEKTVLRATLEAAVYNYEEEIQSNALDAHISRLRRRLAEAGAEVSIHNIRGVGYLLKEE

Specific function: Probable Member Of A Two-Component Regulatory System Ygix/Ygiy. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=35.8744394618834, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=36.5296803652968, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=32.4324324324324, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=33.6363636363636, Blast_Score=122, Evalue=1e-29,
Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=33.6363636363636, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=30.7692307692308, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=30.6306306306306, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=33.1818181818182, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=31.2775330396476, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=32.034632034632, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1786911, Length=238, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=33.6448598130841, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24955; Mature: 24955

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILLIEDERELAKALSAALGKHGIVTDHTMHLADAVELTRQNLYDAILLDRRLPDGEGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SFIPQLRRTGKDTPIIVLTALNEPKERVEGLDLGSDDYLGKPFLVEELMARLRAVLRRPP
HHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
NLAELKITAGRMVIDPLHLSVTVDDAPLDLPRRELLVLAALAKRKEKTVLRATLEAAVYN
CCEEEEEECCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEEEIQSNALDAHISRLRRRLAEAGAEVSIHNIRGVGYLLKEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECC
>Mature Secondary Structure
MRILLIEDERELAKALSAALGKHGIVTDHTMHLADAVELTRQNLYDAILLDRRLPDGEGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SFIPQLRRTGKDTPIIVLTALNEPKERVEGLDLGSDDYLGKPFLVEELMARLRAVLRRPP
HHHHHHHHCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
NLAELKITAGRMVIDPLHLSVTVDDAPLDLPRRELLVLAALAKRKEKTVLRATLEAAVYN
CCEEEEEECCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEEEIQSNALDAHISRLRRRLAEAGAEVSIHNIRGVGYLLKEE
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]