| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209549773
Identifier: 209549773
GI number: 209549773
Start: 2238080
End: 2239264
Strand: Reverse
Name: 209549773
Synonym: Rleg2_2183
Alternate gene names: NA
Gene position: 2239264-2238080 (Counterclockwise)
Preceding gene: 209549774
Following gene: 209549771
Centisome position: 49.35
GC content: 65.49
Gene sequence:
>1185_bases ATGACGCTGTCGATGAACCGGATTTCTCTTTCCCGCCGCGGCTTTCTGACGTCGGCCTGCTGTCTGGCCGCCGCACCCGT CTTCACGCCGGTCACCTTCGCGGCAATGCCAGGCGACAACCGCTTCGTCACCATCGTGCTGCGCGGCGCGATGGACGGGC TGGATCTGGTGCAGCCCTATGGCGATGCGGGTTTTGCCGCGCTCCGGCCGACCTTGGCGCTGACGCCTGAGACCGGGCTT CTGGACCTCGATGGACGTTTCGGTCTCAATCCCGCCGCCGCGGATCTGATGCCGTTCTGGAAAAGCCGGGAACTTGCCTT CGTGCATGCGGTGTCGACGCCCTATCGCGACCAGCGCAGCCATTTCGACGGGCAGGACATGCTGGAATCCGGCGGCGAGC ACGTCGCCGAGGAAAAGACCGGCTGGCTGAACCGAGCGCTTGCCGTCATTCCGCGTTCGGACGCGCGCAAGGCGATCGAC GTCAACACCTCGACCGAACTGATCCTTTCAGGGCCGAACAATGTCGACGTCTGGGCCTCGGATTCCAATCTGGCGCCGGC GCGCGACGAGATGCAGTTCCTGGCGCGGCTCTATGCGGACGACCCGCCGTTTGCCGCAGCTCTTGCCGAGGCGACGCGAG CCGACGCCGCCTCGATGATGGTCGAGCCGGATGGCCAGCGCGGCGAGAAGGTTGCTGATGTGGCGGCGCTCGCGGCCAAC ATGCTGAAGGGCGATTACCGCATCGCCAGTTTCTCGATCACCGGTTGGGATACGCATATCGGCCAGGCGGGCCAGTTCAA GCGACCGGCACAGGATCTGGTGCAGGCGATCAACACGCTGAAGACGACGCTTGGGACCGAGATCTGGGCAAAGACCGTGG TGCTCGCCATGACCGAATTCGGCCGCACCGCCCGCCAGAATGGCTCCGCCGGCACCGACCACGGCACCGGCGGCTGCGCG CTGCTTGCCGGCGGCGCGATCAACGGCGGCCGCATTCTCGGCAAGTGGCCCGGCATCGGCGACGGCCAACTGCTCGACGA CCGCGACCTGATGCCGACCGCCGACGTGCGCGAAGTGGCGGCGGCGATGCTCTATCGGCAGTTCGATGTCGGGGTGGATG ATCTGACGGGGAAGATTTTTCCGGGTTTGGGATTTGATAAGGGATCGCAGTTTTTGCGGGGGTGA
Upstream 100 bases:
>100_bases CAAGCCAACGCTTCGTCTGCTTAGCTCATTTGTTTTGTCGCAGGTTCTGACCGGAAAACCGCTGGACACTTTTCCGGAAC CTGCCCAGGAGGCCCCCGCC
Downstream 100 bases:
>100_bases GAAGCGGTCGGGCGCAGCCCGAGCAATCGATCCAGTGAATCGATTGCTCCCGCTTTGCGGGACCGCGTCTCACCCCATCA CCACCTTGATGTGAAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTLSMNRISLSRRGFLTSACCLAAAPVFTPVTFAAMPGDNRFVTIVLRGAMDGLDLVQPYGDAGFAALRPTLALTPETGL LDLDGRFGLNPAAADLMPFWKSRELAFVHAVSTPYRDQRSHFDGQDMLESGGEHVAEEKTGWLNRALAVIPRSDARKAID VNTSTELILSGPNNVDVWASDSNLAPARDEMQFLARLYADDPPFAAALAEATRADAASMMVEPDGQRGEKVADVAALAAN MLKGDYRIASFSITGWDTHIGQAGQFKRPAQDLVQAINTLKTTLGTEIWAKTVVLAMTEFGRTARQNGSAGTDHGTGGCA LLAGGAINGGRILGKWPGIGDGQLLDDRDLMPTADVREVAAAMLYRQFDVGVDDLTGKIFPGLGFDKGSQFLRG
Sequences:
>Translated_394_residues MTLSMNRISLSRRGFLTSACCLAAAPVFTPVTFAAMPGDNRFVTIVLRGAMDGLDLVQPYGDAGFAALRPTLALTPETGL LDLDGRFGLNPAAADLMPFWKSRELAFVHAVSTPYRDQRSHFDGQDMLESGGEHVAEEKTGWLNRALAVIPRSDARKAID VNTSTELILSGPNNVDVWASDSNLAPARDEMQFLARLYADDPPFAAALAEATRADAASMMVEPDGQRGEKVADVAALAAN MLKGDYRIASFSITGWDTHIGQAGQFKRPAQDLVQAINTLKTTLGTEIWAKTVVLAMTEFGRTARQNGSAGTDHGTGGCA LLAGGAINGGRILGKWPGIGDGQLLDDRDLMPTADVREVAAAMLYRQFDVGVDDLTGKIFPGLGFDKGSQFLRG >Mature_393_residues TLSMNRISLSRRGFLTSACCLAAAPVFTPVTFAAMPGDNRFVTIVLRGAMDGLDLVQPYGDAGFAALRPTLALTPETGLL DLDGRFGLNPAAADLMPFWKSRELAFVHAVSTPYRDQRSHFDGQDMLESGGEHVAEEKTGWLNRALAVIPRSDARKAIDV NTSTELILSGPNNVDVWASDSNLAPARDEMQFLARLYADDPPFAAALAEATRADAASMMVEPDGQRGEKVADVAALAANM LKGDYRIASFSITGWDTHIGQAGQFKRPAQDLVQAINTLKTTLGTEIWAKTVVLAMTEFGRTARQNGSAGTDHGTGGCAL LAGGAINGGRILGKWPGIGDGQLLDDRDLMPTADVREVAAAMLYRQFDVGVDDLTGKIFPGLGFDKGSQFLRG
Specific function: Unknown
COG id: COG4102
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42036; Mature: 41905
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSMNRISLSRRGFLTSACCLAAAPVFTPVTFAAMPGDNRFVTIVLRGAMDGLDLVQPY CCCCCCHHHHHHCCCHHHHHHHHHCHHHCCEEEEECCCCCCEEEEEEECCCCCHHHHCCC GDAGFAALRPTLALTPETGLLDLDGRFGLNPAAADLMPFWKSRELAFVHAVSTPYRDQRS CCCCHHHHCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHC HFDGQDMLESGGEHVAEEKTGWLNRALAVIPRSDARKAIDVNTSTELILSGPNNVDVWAS CCCCHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCEEEEECCCCEEEEEC DSNLAPARDEMQFLARLYADDPPFAAALAEATRADAASMMVEPDGQRGEKVADVAALAAN CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH MLKGDYRIASFSITGWDTHIGQAGQFKRPAQDLVQAINTLKTTLGTEIWAKTVVLAMTEF HHCCCEEEEEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRTARQNGSAGTDHGTGGCALLAGGAINGGRILGKWPGIGDGQLLDDRDLMPTADVREVA HHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHH AAMLYRQFDVGVDDLTGKIFPGLGFDKGSQFLRG HHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCC >Mature Secondary Structure TLSMNRISLSRRGFLTSACCLAAAPVFTPVTFAAMPGDNRFVTIVLRGAMDGLDLVQPY CCCCCHHHHHHCCCHHHHHHHHHCHHHCCEEEEECCCCCCEEEEEEECCCCCHHHHCCC GDAGFAALRPTLALTPETGLLDLDGRFGLNPAAADLMPFWKSRELAFVHAVSTPYRDQRS CCCCHHHHCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHC HFDGQDMLESGGEHVAEEKTGWLNRALAVIPRSDARKAIDVNTSTELILSGPNNVDVWAS CCCCHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCCCEEECCCCCEEEEECCCCEEEEEC DSNLAPARDEMQFLARLYADDPPFAAALAEATRADAASMMVEPDGQRGEKVADVAALAAN CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHH MLKGDYRIASFSITGWDTHIGQAGQFKRPAQDLVQAINTLKTTLGTEIWAKTVVLAMTEF HHCCCEEEEEEEEECCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRTARQNGSAGTDHGTGGCALLAGGAINGGRILGKWPGIGDGQLLDDRDLMPTADVREVA HHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHH AAMLYRQFDVGVDDLTGKIFPGLGFDKGSQFLRG HHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA