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The map label for this gene is srpB [H]

Identifier: 209549739

GI number: 209549739

Start: 2206361

End: 2207080

Strand: Direct

Name: srpB [H]

Synonym: Rleg2_2147

Alternate gene names: 209549739

Gene position: 2206361-2207080 (Clockwise)

Preceding gene: 209549736

Following gene: 209549743

Centisome position: 48.62

GC content: 62.78

Gene sequence:

>720_bases
ATGCCCTCGTTCCTGACGGACGCCATGCCGCTGGCCCCGAGCTGGTGGGATATCGCCGCACGCATCATGCTGACGGTGAT
TGCCGGCGGCCTTATCGGCCTCGACCGCGAGCGCGGCGGCCATGCCGCGGGCTTCAGGACCACGATCCTGGTGGCGCTGG
CCGCCTGCATTGCAATGGTCCAGGCGAACCTGCTTCTATCGACCTACGGAAAAACGCTGAGTTTCTTCACGCAGATGGAC
GTGCTGCGTTTTCCCCTCGGCGTCCTCACAGGCGTCGGCTTCATCGGCGGCGGAGCGATCCTCAGGCGCGGCGACATGAT
GACCGGCGTCACCACGGCTGCGACCCTGTGGTTCATGACGGTCGTCGGCCTCTGTTTCGGCGGCGGCCAGATCGTCACCG
GCACGGTGGCGACCATCGTTGCGTTCATCGTGCTGTCGCCGCTGAAACGCCTGGACAGCTGGCTGCGGTGCGAACGCAAG
GCGACAGTCGTCGTCTACGGCTCGAGTTCCGATATTCCCGACCTGTCAGCTGTGCTGGACTCTCTTGAATGCAGCGCATT
GTTCGTTTCGCTGGGACAGACCGAAGATGGCCGCATCGGCGTGACGTTCGAATTGCGCTGGCTGGCGAAAGATCCGGATG
CATCAGCACGCGCAATTCTTTTCGCCGTCTGCGAGACGTACGAGGTCGCGAATTTCTCGATGCATTCGACGACAACGTGA

Upstream 100 bases:

>100_bases
CCTGCGCCGCATGGCGTTTAGACCCATAATGCATTGAGGCCGAGGAGGATCGAATGCCCGGCGAGCTGCGAAAAGGCCGC
GATAAAGTCTGGAGCGAAAT

Downstream 100 bases:

>100_bases
ACCGGACGGCGCCACAGTCGCTGCCGCTGTTCTTCAACCTATTTCGAGGCGTGCTCCGGTTTACCCTTTCTTTTGGTGGA
TGCGAACTCCTCGAGCTGCT

Product: MgtC/SapB transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPSFLTDAMPLAPSWWDIAARIMLTVIAGGLIGLDRERGGHAAGFRTTILVALAACIAMVQANLLLSTYGKTLSFFTQMD
VLRFPLGVLTGVGFIGGGAILRRGDMMTGVTTAATLWFMTVVGLCFGGGQIVTGTVATIVAFIVLSPLKRLDSWLRCERK
ATVVVYGSSSDIPDLSAVLDSLECSALFVSLGQTEDGRIGVTFELRWLAKDPDASARAILFAVCETYEVANFSMHSTTT

Sequences:

>Translated_239_residues
MPSFLTDAMPLAPSWWDIAARIMLTVIAGGLIGLDRERGGHAAGFRTTILVALAACIAMVQANLLLSTYGKTLSFFTQMD
VLRFPLGVLTGVGFIGGGAILRRGDMMTGVTTAATLWFMTVVGLCFGGGQIVTGTVATIVAFIVLSPLKRLDSWLRCERK
ATVVVYGSSSDIPDLSAVLDSLECSALFVSLGQTEDGRIGVTFELRWLAKDPDASARAILFAVCETYEVANFSMHSTTT
>Mature_238_residues
PSFLTDAMPLAPSWWDIAARIMLTVIAGGLIGLDRERGGHAAGFRTTILVALAACIAMVQANLLLSTYGKTLSFFTQMDV
LRFPLGVLTGVGFIGGGAILRRGDMMTGVTTAATLWFMTVVGLCFGGGQIVTGTVATIVAFIVLSPLKRLDSWLRCERKA
TVVVYGSSSDIPDLSAVLDSLECSALFVSLGQTEDGRIGVTFELRWLAKDPDASARAILFAVCETYEVANFSMHSTTT

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=184, Percent_Identity=30.4347826086957, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25455; Mature: 25324

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFLTDAMPLAPSWWDIAARIMLTVIAGGLIGLDRERGGHAAGFRTTILVALAACIAMV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QANLLLSTYGKTLSFFTQMDVLRFPLGVLTGVGFIGGGAILRRGDMMTGVTTAATLWFMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHH
VVGLCFGGGQIVTGTVATIVAFIVLSPLKRLDSWLRCERKATVVVYGSSSDIPDLSAVLD
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
SLECSALFVSLGQTEDGRIGVTFELRWLAKDPDASARAILFAVCETYEVANFSMHSTTT
HHHHHHHHEECCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSFLTDAMPLAPSWWDIAARIMLTVIAGGLIGLDRERGGHAAGFRTTILVALAACIAMV
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
QANLLLSTYGKTLSFFTQMDVLRFPLGVLTGVGFIGGGAILRRGDMMTGVTTAATLWFMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHH
VVGLCFGGGQIVTGTVATIVAFIVLSPLKRLDSWLRCERKATVVVYGSSSDIPDLSAVLD
HHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
SLECSALFVSLGQTEDGRIGVTFELRWLAKDPDASARAILFAVCETYEVANFSMHSTTT
HHHHHHHHEECCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]