| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is murI [H]
Identifier: 209549543
GI number: 209549543
Start: 1993198
End: 1993998
Strand: Reverse
Name: murI [H]
Synonym: Rleg2_1949
Alternate gene names: 209549543
Gene position: 1993998-1993198 (Counterclockwise)
Preceding gene: 209549544
Following gene: 209549542
Centisome position: 43.94
GC content: 63.3
Gene sequence:
>801_bases ATGACAGCGACGACGCGTGAGCTGAAACCTATCCTTCTCTTCGATTCCGGCATCGGCGGGCTGACCGTCTTGCGCGAGGC GCGCGTCTTGATGCCTGAGCGCGGCTTCATCTATGTCGCCGACGATGCCGGTTTTCCCTATGGCGGCTGGGAAGAACAGG CGCTGAAGGAGCGGGTTATCGGGCTCTTCGCCAAGCTGCTGGCGGATTATGACCCTGAAGTCTGCATCATCGCCTGCAAC ACCGCCTTCACGCTTGTTGGAGCTGACCTGCGCGCCGCCTTTCCCCAGATGATCTTTGTCGGCACCGTGCCGGCGATCAA GCCGGCGGCGGAGCGCACGCGCTCGGGCCTGGTCTCGGTGCTTGCCACCCCCGGCACGGTGAGGCGGGCCTATACGCGCG ATCTCATCCAATCCTTTGCGCAGCAATGCCATGTCCGCCTCGTCGGCTCTGAGAACCTGGCGCGCATGGCCGAAGCCTAT ATTCGCGGCGACACCGTCTCCGACGACGCCGTGCTTGCGGAAATCGACCAATGTTTCGTCGAGAAGGACGGACACAAGAC CGATATCGTCGTGCTGGCCTGCACCCATTATCCGTTCATGGCCAATCTTTTCCGCCGGCTTGCACCCTGGCCGGTCGACT GGCTTGATCCGGCCGAAGCAATCGCCCGCCGCGCCCGCACGCTGGTGCCGGCGGCGGCCGATGCGGTGCATCCCGACAAT TTCGACTTCGCTGTCTTCACGTCCGGCCACCAGGATTTCGCGACAAGACGGCTGATGCAGGGTTTCGGCCTGAGGGCATG A
Upstream 100 bases:
>100_bases ATTAGCGTGCTGCGCGGCGTCATCTCCTCCCTCGACCGCTTTTCGCGCAAGAGCCCGCGCGGTGGCAGGTTCCCGACACC GGCCAAGGAAACACCGCCAG
Downstream 100 bases:
>100_bases AGGGAATTGTCCTGTGGGTTGGCGAAATCCGGCCCTGAAAATCAGCAGATTCTTTGATAGACGGGGCGTTGCCGTTTCGG AAGAATGGCGCTTCACTCAT
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTATTRELKPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLADYDPEVCIIACN TAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAYTRDLIQSFAQQCHVRLVGSENLARMAEAY IRGDTVSDDAVLAEIDQCFVEKDGHKTDIVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDN FDFAVFTSGHQDFATRRLMQGFGLRA
Sequences:
>Translated_266_residues MTATTRELKPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLADYDPEVCIIACN TAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAYTRDLIQSFAQQCHVRLVGSENLARMAEAY IRGDTVSDDAVLAEIDQCFVEKDGHKTDIVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDN FDFAVFTSGHQDFATRRLMQGFGLRA >Mature_265_residues TATTRELKPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVIGLFAKLLADYDPEVCIIACNT AFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSVLATPGTVRRAYTRDLIQSFAQQCHVRLVGSENLARMAEAYI RGDTVSDDAVLAEIDQCFVEKDGHKTDIVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDNF DFAVFTSGHQDFATRRLMQGFGLRA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=225, Percent_Identity=40.4444444444444, Blast_Score=157, Evalue=6e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29277; Mature: 29146
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTRELKPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVI CCCCCHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHH GLFAKLLADYDPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSV HHHHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH LATPGTVRRAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFV HCCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EKDGHKTDIVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDN HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC FDFAVFTSGHQDFATRRLMQGFGLRA CCEEEEECCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TATTRELKPILLFDSGIGGLTVLREARVLMPERGFIYVADDAGFPYGGWEEQALKERVI CCCCHHCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHH GLFAKLLADYDPEVCIIACNTAFTLVGADLRAAFPQMIFVGTVPAIKPAAERTRSGLVSV HHHHHHHHCCCCCEEEEEECCEEEEECCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHH LATPGTVRRAYTRDLIQSFAQQCHVRLVGSENLARMAEAYIRGDTVSDDAVLAEIDQCFV HCCCCHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH EKDGHKTDIVVLACTHYPFMANLFRRLAPWPVDWLDPAEAIARRARTLVPAAADAVHPDN HCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCC FDFAVFTSGHQDFATRRLMQGFGLRA CCEEEEECCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]