| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is glsA [H]
Identifier: 209549540
GI number: 209549540
Start: 1989599
End: 1990528
Strand: Reverse
Name: glsA [H]
Synonym: Rleg2_1946
Alternate gene names: 209549540
Gene position: 1990528-1989599 (Counterclockwise)
Preceding gene: 209549541
Following gene: 209549539
Centisome position: 43.86
GC content: 63.55
Gene sequence:
>930_bases ATGGCGGATCTGCAGGCAATCCTCGATAGTATCCATACCGATATCCTCCCGCGCATCGGCGAGGGCAAGGTCGCCGACTA TATTCCCGAGCTTGCCAAGGTCGATCCACGGCAGTTCGGCATGGCGATCGTCACCGTCGACGGCAAGGTCTATCGTGTCG GCGATGCCGACATTGCCTTCTCGATCCAGAGCATCTCCAAGGTCTTTATGCTGACCTTGGCGCTCGGCAAGGTCGGCGAG AGCCTCTGGAAGCGCGTCGGGCGAGAACCATCCGGATCGGCCTTCAATTCCATCGTCCAGCTCGAGCACGAGGGCGGCAT CCCGCGCAATCCCTTCATCAATGCCGGCGCGATCGCCGTTTCCGACGTCGTCATGGCCGGCCATGCGCCGCGTGAGGCGA TCGGCGAATTGCTGCGCTTCGTGCGTTATCTCGCCGATGACGAATCGATCACCATCGACGACAAGGTGGCGCGCTCGGAA ACGCAGACAGGATACCGCAATGTCGCGCTTGCCAATTTCATGCGCGCCTACCGCAATCTCGACCATCCCGTCGACCATGT GCTCGGCGTCTATTTCCATCAATGCGCGCTGTCGATGAGCTGCGAACAGCTGGCCCGCGCCGGGCTGTTCCTGGCGGCCC GCGGCAGCAATCCGATGACCGGCCATTCGGTGGTCTCGCCGAAGCGGGCGCGGCGCATCAATGCGCTGATGCTGACCTGC GGCCATTACGACGGCTCGGGCGATTTCGCCTATCATGTCGGCCTGCCCGGCAAGAGCGGTGTAGGCGGCGGCATCTTCGC GGTTGCGCCGGGCATCGCCTCGATCGCCGTCTGGTCGCCGGGCTTGAACAAGGTCGGCAATTCGCAGCTCGGCGCCGTGG CGCTGGAAATGCTGGCGGCGCGCACCGGCTGGTCGGTTTTCGGCGATTGA
Upstream 100 bases:
>100_bases CTGGTCGTCGAATTCTATTCGCGTTAATAAGAACCAGGCGTTTTCGCTTATGGAAAAGCCGCTCTTTCGGGCGGCTTTTT TTGTTATCCGGAGAGAAGCG
Downstream 100 bases:
>100_bases CGCTGTGTTGGCGAACTCGTTTCTGCTAAGGCAGACAGACCTCGATAGGACGACGCAATGAATATCGCAGCCAATATTGC GGATGATCTGGAAAGCGGCG
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MADLQAILDSIHTDILPRIGEGKVADYIPELAKVDPRQFGMAIVTVDGKVYRVGDADIAFSIQSISKVFMLTLALGKVGE SLWKRVGREPSGSAFNSIVQLEHEGGIPRNPFINAGAIAVSDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSE TQTGYRNVALANFMRAYRNLDHPVDHVLGVYFHQCALSMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTC GHYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAARTGWSVFGD
Sequences:
>Translated_309_residues MADLQAILDSIHTDILPRIGEGKVADYIPELAKVDPRQFGMAIVTVDGKVYRVGDADIAFSIQSISKVFMLTLALGKVGE SLWKRVGREPSGSAFNSIVQLEHEGGIPRNPFINAGAIAVSDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSE TQTGYRNVALANFMRAYRNLDHPVDHVLGVYFHQCALSMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTC GHYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAARTGWSVFGD >Mature_308_residues ADLQAILDSIHTDILPRIGEGKVADYIPELAKVDPRQFGMAIVTVDGKVYRVGDADIAFSIQSISKVFMLTLALGKVGES LWKRVGREPSGSAFNSIVQLEHEGGIPRNPFINAGAIAVSDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSET QTGYRNVALANFMRAYRNLDHPVDHVLGVYFHQCALSMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTCG HYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAARTGWSVFGD
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=273, Percent_Identity=38.8278388278388, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI20336214, Length=296, Percent_Identity=36.8243243243243, Blast_Score=192, Evalue=5e-49, Organism=Escherichia coli, GI1787804, Length=304, Percent_Identity=51.9736842105263, Blast_Score=293, Evalue=8e-81, Organism=Escherichia coli, GI1786693, Length=305, Percent_Identity=40.655737704918, Blast_Score=199, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507019, Length=291, Percent_Identity=37.8006872852234, Blast_Score=192, Evalue=1e-49, Organism=Caenorhabditis elegans, GI193204073, Length=286, Percent_Identity=37.4125874125874, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193204075, Length=288, Percent_Identity=37.1527777777778, Blast_Score=187, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17532727, Length=301, Percent_Identity=34.21926910299, Blast_Score=180, Evalue=8e-46, Organism=Drosophila melanogaster, GI24653162, Length=307, Percent_Identity=35.5048859934853, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI281363241, Length=307, Percent_Identity=35.5048859934853, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24653166, Length=307, Percent_Identity=35.5048859934853, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24653156, Length=307, Percent_Identity=35.5048859934853, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI116008307, Length=307, Percent_Identity=35.5048859934853, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI24653164, Length=307, Percent_Identity=35.5048859934853, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI24653158, Length=307, Percent_Identity=35.5048859934853, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI281363239, Length=307, Percent_Identity=35.5048859934853, Blast_Score=189, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 32977; Mature: 32846
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLQAILDSIHTDILPRIGEGKVADYIPELAKVDPRQFGMAIVTVDGKVYRVGDADIAF CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCEEEEEECCEEEEECCCHHHH SIQSISKVFMLTLALGKVGESLWKRVGREPSGSAFNSIVQLEHEGGIPRNPFINAGAIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCCCCCCCCCHHHH SDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSETQTGYRNVALANFMRAYRNL HHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHCC DHPVDHVLGVYFHQCALSMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTC CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEE GHYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAA CCCCCCCCEEEEECCCCCCCCCCCHHHHCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHH RTGWSVFGD HCCCCCCCC >Mature Secondary Structure ADLQAILDSIHTDILPRIGEGKVADYIPELAKVDPRQFGMAIVTVDGKVYRVGDADIAF CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCEEEEEECCEEEEECCCHHHH SIQSISKVFMLTLALGKVGESLWKRVGREPSGSAFNSIVQLEHEGGIPRNPFINAGAIAV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEEECCCCCCCCCCCCCCCHHHH SDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSETQTGYRNVALANFMRAYRNL HHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHCCHHHHHHHHHHHHHHCC DHPVDHVLGVYFHQCALSMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTC CCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEE GHYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAA CCCCCCCCEEEEECCCCCCCCCCCHHHHCCCHHEEEEECCCCCCCCCCHHHHHHHHHHHH RTGWSVFGD HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA