Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

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The map label for this gene is treS [H]

Identifier: 209549502

GI number: 209549502

Start: 1952174

End: 1953835

Strand: Direct

Name: treS [H]

Synonym: Rleg2_1908

Alternate gene names: 209549502

Gene position: 1952174-1953835 (Clockwise)

Preceding gene: 209549500

Following gene: 209549504

Centisome position: 43.02

GC content: 59.99

Gene sequence:

>1662_bases
ATGATCAACGACCTCTGGTATAAGAACGCCGTCATCTACTGCCTCTCGGTCGAGACCTTCATGGATGCGAACGGTGACGG
CGTCGGTGATTTTCAGGGGCTGATGCGGCGCCTCGATTATCTCTCCGGCCTTGGCGTGACGGCGATCTGGTTGATGCCCT
TCCAGACGTCGCCCGGCCGCGACGACGGCTATGATGTTTCCGACTATTACAATGTCGACCCGCGCTATGGTTCGCTCGGC
GATTTCGTCGAGTTCACCCATGGCGCCAAGCAGCGCGGTATCCGCGTGCTGATCGACCTGGTGATCAACCACACCTCCAA
GGACCATCCCTGGTTTCAAGGCGCCAGAAGCGACCCGCACTCACCCTATCGCGACTGGTACGTCTGGTCTGAGAAAAAAC
CTGCGAATGCCGATCAGGGCATGGTCTTCCCTGGCGTCCAGAAGACCACCTGGACCCATGACGAAAAGGCCAGGGCCTAT
TATTTTCACCGCTTCTACGACCACCAGCCCGATCTCAACACCTCCAATCCCGAGGTGCAGGCCGAGATCCTCAAGATCAT
GGGCTTCTGGATCCAGCTCGGCGTCTCCGGCTTCCGGATGGATGCCGCCCCCTTCATCATCGCGACGAAAGGCGCAGACG
TTTCCAAGCCCGTCGAGCAGTTCGACATGCTGAGGAAGTTTCGCGAATTCCTGCAATGGCGCCTGGGCGATTCCATTATC
CTCGCCGAGGCCAATATCCTGCCGAAGGACAATTTTGAATATTTCGGCAACGACGGCGACCGCATGCAGATGATGTTCAA
TTTCCAGGTCAATCAGGCGCTGTTTTATGCTCTCGCCAGCGCCGATACGCGGCCGCTGAAGAAGGCGATGGAGACGACGA
AACCGCGCCCGGCCACCGCCCAATGGGGTCTTTTTCTGCGCAATCACGACGAACTGGATCTCGGCCGGCTGTCGGAAAAG
CAGCGCGGCGCGGTCTTTGCCGCCTTCGGACCCGAAAAGGACATGCAGCTTTACGACAGGGGCATTCGCCGTCGGCTGGC
GCCGATGCTCGGCGGCGACCGCCGCAGGATCGAGATGGCTTACAGCCTGCTGTTCTCGCTGCCCGGAACGCCTGTCATCC
GCTACGGCGACGAGATCGGCATGGGCGACGATCTGACTTTGCCGGAGCGCAACTGCGCCCGCACGCCGATGCAGTGGTCG
ACGGAACCGGAAGGCGGTTTCACCAAGAGTAGAAAGCCTGTTTCGCCTGTAATCAAGGACGGCCCCTACGGTTTCCAGCA
TGTCAACGTCGCCGAGCAGCGGCGCGATCCCAATTCGCTGCTGAACTGGACCGAACGGATGATCCGGATGCGCAAGGAAG
CTCCGGAAATCGGCTGGGGCGACTTCGCTGTTGTCGATACCGGGGACGACGGGGTGCTGGCGCTTCGTTACGACTGGCGC
GGCAATTCCGTGTTGATCCTGCACAATCTGCATGGGCAGCCGTCAGAAGTGACCTTCGATCCCGATGTCGGCGAAGACGG
GCGGCAGCTGATCGACATCGCCGATGGCGCCAGCAGCGAGGCGGACGAGAAAGGCTTTCATACCGTCAGGCTCGATGCCT
ACGGCTACCGCTGGTATCGCGTCGGAGGCCTAGACTATCTCCTCAGGCGCAGAGAAATTTAA

Upstream 100 bases:

>100_bases
ATAGGTCTGAAGCAGCGGACAAGCCGCACGACAATGACCGCTTTATCGGAACCTTTTCCGCCCGCCGGGATTTGCGACCA
GATTGAATTGGAGCGCCGGC

Downstream 100 bases:

>100_bases
TCCAGTCGCCCGGAAGCGTGCAGCGGTTCCGGGATAACGACATGCATCAAAACAAAGAGCTGAAGCGCGTCGTATGAATC
AAGTTTGATTCGACACGCTT

Product: alpha amylase catalytic protein

Products: NA

Alternate protein names: Maltose alpha-D-glucosyltransferase [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG
DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY
YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII
LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK
QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS
TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR
GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI

Sequences:

>Translated_553_residues
MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG
DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY
YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII
LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK
QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS
TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR
GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI
>Mature_553_residues
MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG
DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY
YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII
LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK
QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS
TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR
GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI

Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=211, Percent_Identity=35.0710900473934, Blast_Score=154, Evalue=3e-37,
Organism=Escherichia coli, GI1790687, Length=540, Percent_Identity=30.3703703703704, Blast_Score=215, Evalue=6e-57,
Organism=Escherichia coli, GI1786604, Length=114, Percent_Identity=39.4736842105263, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081873, Length=360, Percent_Identity=21.9444444444444, Blast_Score=85, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI25147709, Length=467, Percent_Identity=23.7687366167024, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32565753, Length=468, Percent_Identity=24.1452991452991, Blast_Score=89, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6322245, Length=571, Percent_Identity=27.1453590192644, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6321726, Length=554, Percent_Identity=27.6173285198556, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6319776, Length=204, Percent_Identity=39.7058823529412, Blast_Score=160, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6321731, Length=204, Percent_Identity=39.7058823529412, Blast_Score=159, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6322241, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6322021, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6324416, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24586587, Length=486, Percent_Identity=31.4814814814815, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24586589, Length=554, Percent_Identity=28.7003610108303, Blast_Score=198, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24586593, Length=545, Percent_Identity=28.8073394495413, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI45549022, Length=579, Percent_Identity=27.979274611399, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI221330053, Length=576, Percent_Identity=27.4305555555556, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24586591, Length=542, Percent_Identity=28.7822878228782, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24586597, Length=548, Percent_Identity=27.3722627737226, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24586599, Length=588, Percent_Identity=26.1904761904762, Blast_Score=178, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24583745, Length=575, Percent_Identity=25.9130434782609, Blast_Score=174, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24583749, Length=512, Percent_Identity=28.125, Blast_Score=169, Evalue=6e-42,
Organism=Drosophila melanogaster, GI24583747, Length=512, Percent_Identity=28.125, Blast_Score=168, Evalue=7e-42,
Organism=Drosophila melanogaster, GI281360393, Length=490, Percent_Identity=26.734693877551, Blast_Score=140, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012810 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =5.4.99.16 [H]

Molecular weight: Translated: 63316; Mature: 63316

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGR
CCCCCEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
DDGYDVSDYYNVDPRYGSLGDFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPH
CCCCCCCCEECCCCCCCCHHHHHHHHCCHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCC
SPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAYYFHRFYDHQPDLNTSNPEVQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCCCCCCCCHHH
AEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII
HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATA
EEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
QWGLFLRNHDELDLGRLSEKQRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMA
CCEEEEECCCCCCHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
YSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWSTEPEGGFTKSRKPVSPVIKD
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR
CCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECC
GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYR
CCEEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECEEEEE
VGGLDYLLRRREI
ECCHHHHHHHCCC
>Mature Secondary Structure
MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGR
CCCCCEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
DDGYDVSDYYNVDPRYGSLGDFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPH
CCCCCCCCEECCCCCCCCHHHHHHHHCCHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCC
SPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAYYFHRFYDHQPDLNTSNPEVQ
CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCCCCCCCCHHH
AEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII
HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATA
EEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
QWGLFLRNHDELDLGRLSEKQRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMA
CCEEEEECCCCCCHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
YSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWSTEPEGGFTKSRKPVSPVIKD
HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR
CCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECC
GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYR
CCEEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECEEEEE
VGGLDYLLRRREI
ECCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9042362 [H]