| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is treS [H]
Identifier: 209549502
GI number: 209549502
Start: 1952174
End: 1953835
Strand: Direct
Name: treS [H]
Synonym: Rleg2_1908
Alternate gene names: 209549502
Gene position: 1952174-1953835 (Clockwise)
Preceding gene: 209549500
Following gene: 209549504
Centisome position: 43.02
GC content: 59.99
Gene sequence:
>1662_bases ATGATCAACGACCTCTGGTATAAGAACGCCGTCATCTACTGCCTCTCGGTCGAGACCTTCATGGATGCGAACGGTGACGG CGTCGGTGATTTTCAGGGGCTGATGCGGCGCCTCGATTATCTCTCCGGCCTTGGCGTGACGGCGATCTGGTTGATGCCCT TCCAGACGTCGCCCGGCCGCGACGACGGCTATGATGTTTCCGACTATTACAATGTCGACCCGCGCTATGGTTCGCTCGGC GATTTCGTCGAGTTCACCCATGGCGCCAAGCAGCGCGGTATCCGCGTGCTGATCGACCTGGTGATCAACCACACCTCCAA GGACCATCCCTGGTTTCAAGGCGCCAGAAGCGACCCGCACTCACCCTATCGCGACTGGTACGTCTGGTCTGAGAAAAAAC CTGCGAATGCCGATCAGGGCATGGTCTTCCCTGGCGTCCAGAAGACCACCTGGACCCATGACGAAAAGGCCAGGGCCTAT TATTTTCACCGCTTCTACGACCACCAGCCCGATCTCAACACCTCCAATCCCGAGGTGCAGGCCGAGATCCTCAAGATCAT GGGCTTCTGGATCCAGCTCGGCGTCTCCGGCTTCCGGATGGATGCCGCCCCCTTCATCATCGCGACGAAAGGCGCAGACG TTTCCAAGCCCGTCGAGCAGTTCGACATGCTGAGGAAGTTTCGCGAATTCCTGCAATGGCGCCTGGGCGATTCCATTATC CTCGCCGAGGCCAATATCCTGCCGAAGGACAATTTTGAATATTTCGGCAACGACGGCGACCGCATGCAGATGATGTTCAA TTTCCAGGTCAATCAGGCGCTGTTTTATGCTCTCGCCAGCGCCGATACGCGGCCGCTGAAGAAGGCGATGGAGACGACGA AACCGCGCCCGGCCACCGCCCAATGGGGTCTTTTTCTGCGCAATCACGACGAACTGGATCTCGGCCGGCTGTCGGAAAAG CAGCGCGGCGCGGTCTTTGCCGCCTTCGGACCCGAAAAGGACATGCAGCTTTACGACAGGGGCATTCGCCGTCGGCTGGC GCCGATGCTCGGCGGCGACCGCCGCAGGATCGAGATGGCTTACAGCCTGCTGTTCTCGCTGCCCGGAACGCCTGTCATCC GCTACGGCGACGAGATCGGCATGGGCGACGATCTGACTTTGCCGGAGCGCAACTGCGCCCGCACGCCGATGCAGTGGTCG ACGGAACCGGAAGGCGGTTTCACCAAGAGTAGAAAGCCTGTTTCGCCTGTAATCAAGGACGGCCCCTACGGTTTCCAGCA TGTCAACGTCGCCGAGCAGCGGCGCGATCCCAATTCGCTGCTGAACTGGACCGAACGGATGATCCGGATGCGCAAGGAAG CTCCGGAAATCGGCTGGGGCGACTTCGCTGTTGTCGATACCGGGGACGACGGGGTGCTGGCGCTTCGTTACGACTGGCGC GGCAATTCCGTGTTGATCCTGCACAATCTGCATGGGCAGCCGTCAGAAGTGACCTTCGATCCCGATGTCGGCGAAGACGG GCGGCAGCTGATCGACATCGCCGATGGCGCCAGCAGCGAGGCGGACGAGAAAGGCTTTCATACCGTCAGGCTCGATGCCT ACGGCTACCGCTGGTATCGCGTCGGAGGCCTAGACTATCTCCTCAGGCGCAGAGAAATTTAA
Upstream 100 bases:
>100_bases ATAGGTCTGAAGCAGCGGACAAGCCGCACGACAATGACCGCTTTATCGGAACCTTTTCCGCCCGCCGGGATTTGCGACCA GATTGAATTGGAGCGCCGGC
Downstream 100 bases:
>100_bases TCCAGTCGCCCGGAAGCGTGCAGCGGTTCCGGGATAACGACATGCATCAAAACAAAGAGCTGAAGCGCGTCGTATGAATC AAGTTTGATTCGACACGCTT
Product: alpha amylase catalytic protein
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI
Sequences:
>Translated_553_residues MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI >Mature_553_residues MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGRDDGYDVSDYYNVDPRYGSLG DFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPHSPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAY YFHRFYDHQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATAQWGLFLRNHDELDLGRLSEK QRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMAYSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWS TEPEGGFTKSRKPVSPVIKDGPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYRVGGLDYLLRRREI
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=211, Percent_Identity=35.0710900473934, Blast_Score=154, Evalue=3e-37, Organism=Escherichia coli, GI1790687, Length=540, Percent_Identity=30.3703703703704, Blast_Score=215, Evalue=6e-57, Organism=Escherichia coli, GI1786604, Length=114, Percent_Identity=39.4736842105263, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081873, Length=360, Percent_Identity=21.9444444444444, Blast_Score=85, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25147709, Length=467, Percent_Identity=23.7687366167024, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI32565753, Length=468, Percent_Identity=24.1452991452991, Blast_Score=89, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6322245, Length=571, Percent_Identity=27.1453590192644, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321726, Length=554, Percent_Identity=27.6173285198556, Blast_Score=176, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319776, Length=204, Percent_Identity=39.7058823529412, Blast_Score=160, Evalue=7e-40, Organism=Saccharomyces cerevisiae, GI6321731, Length=204, Percent_Identity=39.7058823529412, Blast_Score=159, Evalue=7e-40, Organism=Saccharomyces cerevisiae, GI6322241, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6322021, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6324416, Length=212, Percent_Identity=36.7924528301887, Blast_Score=157, Evalue=4e-39, Organism=Drosophila melanogaster, GI24586587, Length=486, Percent_Identity=31.4814814814815, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI24586589, Length=554, Percent_Identity=28.7003610108303, Blast_Score=198, Evalue=1e-50, Organism=Drosophila melanogaster, GI24586593, Length=545, Percent_Identity=28.8073394495413, Blast_Score=195, Evalue=6e-50, Organism=Drosophila melanogaster, GI45549022, Length=579, Percent_Identity=27.979274611399, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI221330053, Length=576, Percent_Identity=27.4305555555556, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24586591, Length=542, Percent_Identity=28.7822878228782, Blast_Score=193, Evalue=3e-49, Organism=Drosophila melanogaster, GI24586597, Length=548, Percent_Identity=27.3722627737226, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24586599, Length=588, Percent_Identity=26.1904761904762, Blast_Score=178, Evalue=7e-45, Organism=Drosophila melanogaster, GI24583745, Length=575, Percent_Identity=25.9130434782609, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583749, Length=512, Percent_Identity=28.125, Blast_Score=169, Evalue=6e-42, Organism=Drosophila melanogaster, GI24583747, Length=512, Percent_Identity=28.125, Blast_Score=168, Evalue=7e-42, Organism=Drosophila melanogaster, GI281360393, Length=490, Percent_Identity=26.734693877551, Blast_Score=140, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 63316; Mature: 63316
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGR CCCCCEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC DDGYDVSDYYNVDPRYGSLGDFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPH CCCCCCCCEECCCCCCCCHHHHHHHHCCHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCC SPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAYYFHRFYDHQPDLNTSNPEVQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCCCCCCCCHHH AEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATA EEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC QWGLFLRNHDELDLGRLSEKQRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMA CCEEEEECCCCCCHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH YSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWSTEPEGGFTKSRKPVSPVIKD HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR CCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECC GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYR CCEEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECEEEEE VGGLDYLLRRREI ECCHHHHHHHCCC >Mature Secondary Structure MINDLWYKNAVIYCLSVETFMDANGDGVGDFQGLMRRLDYLSGLGVTAIWLMPFQTSPGR CCCCCEECCEEEEEEEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC DDGYDVSDYYNVDPRYGSLGDFVEFTHGAKQRGIRVLIDLVINHTSKDHPWFQGARSDPH CCCCCCCCEECCCCCCCCHHHHHHHHCCHHHCCHHEEEHHHHCCCCCCCCCCCCCCCCCC SPYRDWYVWSEKKPANADQGMVFPGVQKTTWTHDEKARAYYFHRFYDHQPDLNTSNPEVQ CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHHCCCCCCCCCCCHHH AEILKIMGFWIQLGVSGFRMDAAPFIIATKGADVSKPVEQFDMLRKFREFLQWRLGDSII HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE LAEANILPKDNFEYFGNDGDRMQMMFNFQVNQALFYALASADTRPLKKAMETTKPRPATA EEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC QWGLFLRNHDELDLGRLSEKQRGAVFAAFGPEKDMQLYDRGIRRRLAPMLGGDRRRIEMA CCEEEEECCCCCCHHHCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH YSLLFSLPGTPVIRYGDEIGMGDDLTLPERNCARTPMQWSTEPEGGFTKSRKPVSPVIKD HHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPYGFQHVNVAEQRRDPNSLLNWTERMIRMRKEAPEIGWGDFAVVDTGDDGVLALRYDWR CCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEECC GNSVLILHNLHGQPSEVTFDPDVGEDGRQLIDIADGASSEADEKGFHTVRLDAYGYRWYR CCEEEEEECCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECEEEEE VGGLDYLLRRREI ECCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9042362 [H]