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The map label for this gene is sufC [C]

Identifier: 209549492

GI number: 209549492

Start: 1942463

End: 1943251

Strand: Reverse

Name: sufC [C]

Synonym: Rleg2_1898

Alternate gene names: 209549492

Gene position: 1943251-1942463 (Counterclockwise)

Preceding gene: 209549493

Following gene: 209549491

Centisome position: 42.82

GC content: 61.09

Gene sequence:

>789_bases
ATGAGCTACGCAGAGAAAACGCAGGAACCAAAGATGCTTGAAATCAGAAACCTCCATGCCCGTATTGCCGAAGACGGCAC
CGAGATCATCCGTGGCCTGAACCTGACGGTGAAGGCCGGCGAAGTGGCCGCGATCATGGGGCCGAACGGCTCCGGCAAGT
CGACGCTCTCCTACGTGCTGTCCGGCCGCAGCGACTACGAAGTCACCGAGGGCGACATTCTCTATAATGGCGAGAGCATT
CTTGAGCTCGATCCGGCCGAACGCGCCGCCAAGGGTGTCTTCCTCGCCTTCCAGTATCCTGTGGAAATTCCGGGTGTCGC
CACCATGCAGTTCCTGAAGGTGGCGATGAACGAGCAGCGCAAGGCGCGGGGCGAGGACGAGCTGACGACGCCGGATTTCA
TGCGCCGCGTCAAGGATGCTGCCGGCAAACTGCAGATCAACACCGAGATGCTGAAGCGGCCGCTCAATGTCGGCTTTTCC
GGCGGCGAGAAGAAGCGGGCCGAGATCCTGCAGATGGCGCTGCTGGAGCCGAAGCTCTGCGTGCTCGACGAAACCGATTC
CGGCCTCGACATCGACGCGCTGAAGATCGTTGCCGATGGTGTCAACGCACTGCGTTCGCCTGATCGCGCCGTCGTCGTCA
TCACCCACTACCAGCGCCTGCTCGACTATATCGTGCCGGATACCGTCCACGTGCTCTACAAGGGCCAGGTGATCAAGTCT
GGCGACAAGACGCTGGCGCATGAGCTGGAAGCCAATGGTTATGCCGACATCATCGGCGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
TTTGGCTCGTAACGGTCGCGGTTTTCCGCGTTTTCCGTTTTTTGGGGCGATAGCGCCGAGCACAACATGTCGATGTCCTT
AGAAATTACGCGAGGCTCCG

Downstream 100 bases:

>100_bases
TCTCGGGTGGAAAGGACGACGTCCATGAACATGCAGACGACGAGCCGCCTTACTGCGGCCGAAACGGCGCTGATCGAGGC
TTTCAACCATCAGATCGGCG

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSYAEKTQEPKMLEIRNLHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYVLSGRSDYEVTEGDILYNGESI
LELDPAERAAKGVFLAFQYPVEIPGVATMQFLKVAMNEQRKARGEDELTTPDFMRRVKDAAGKLQINTEMLKRPLNVGFS
GGEKKRAEILQMALLEPKLCVLDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKS
GDKTLAHELEANGYADIIGAAA

Sequences:

>Translated_262_residues
MSYAEKTQEPKMLEIRNLHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYVLSGRSDYEVTEGDILYNGESI
LELDPAERAAKGVFLAFQYPVEIPGVATMQFLKVAMNEQRKARGEDELTTPDFMRRVKDAAGKLQINTEMLKRPLNVGFS
GGEKKRAEILQMALLEPKLCVLDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKS
GDKTLAHELEANGYADIIGAAA
>Mature_261_residues
SYAEKTQEPKMLEIRNLHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYVLSGRSDYEVTEGDILYNGESIL
ELDPAERAAKGVFLAFQYPVEIPGVATMQFLKVAMNEQRKARGEDELTTPDFMRRVKDAAGKLQINTEMLKRPLNVGFSG
GEKKRAEILQMALLEPKLCVLDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKSG
DKTLAHELEANGYADIIGAAA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=222, Percent_Identity=29.2792792792793, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI42741659, Length=252, Percent_Identity=26.5873015873016, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI156105685, Length=242, Percent_Identity=26.8595041322314, Blast_Score=68, Evalue=7e-12,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=56.9672131147541, Blast_Score=293, Evalue=1e-80,
Organism=Escherichia coli, GI1787370, Length=241, Percent_Identity=27.3858921161826, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87082267, Length=164, Percent_Identity=31.0975609756098, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789672, Length=224, Percent_Identity=25.8928571428571, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081709, Length=271, Percent_Identity=23.9852398523985, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789891, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=28.3720930232558, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1790162, Length=214, Percent_Identity=28.0373831775701, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=24.3697478991597, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI87081791, Length=253, Percent_Identity=24.901185770751, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI48994883, Length=250, Percent_Identity=26.8, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787758, Length=236, Percent_Identity=26.6949152542373, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789963, Length=227, Percent_Identity=28.1938325991189, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=25.6756756756757, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788897, Length=220, Percent_Identity=30, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788053, Length=212, Percent_Identity=28.3018867924528, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI87081834, Length=226, Percent_Identity=28.3185840707965, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI48995001, Length=218, Percent_Identity=25.6880733944954, Blast_Score=60, Evalue=1e-10,
Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=26.530612244898, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=29.646017699115, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=249, Percent_Identity=28.9156626506024, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17558664, Length=227, Percent_Identity=28.1938325991189, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71992290, Length=237, Percent_Identity=28.6919831223629, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=28.310502283105, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71984940, Length=224, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=216, Percent_Identity=25.9259259259259, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=190, Percent_Identity=26.8421052631579, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=221, Percent_Identity=28.5067873303167, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85724864, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580555, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI85816269, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24580553, Length=237, Percent_Identity=26.1603375527426, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28631; Mature: 28500

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAEKTQEPKMLEIRNLHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYVL
CCCCHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHH
SGRSDYEVTEGDILYNGESILELDPAERAAKGVFLAFQYPVEIPGVATMQFLKVAMNEQR
CCCCCCEECCCCEEECCCCEEEECCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
KARGEDELTTPDFMRRVKDAAGKLQINTEMLKRPLNVGFSGGEKKRAEILQMALLEPKLC
HHCCCCCCCCHHHHHHHHHHHCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEE
VLDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKS
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECEEEEC
GDKTLAHELEANGYADIIGAAA
CCHHHHHHHCCCCCHHHCCCCC
>Mature Secondary Structure 
SYAEKTQEPKMLEIRNLHARIAEDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYVL
CCCHHCCCCCHHHHHHHHHHHHCCHHHHHHCCCEEEECCCEEEEECCCCCCHHHHHHHH
SGRSDYEVTEGDILYNGESILELDPAERAAKGVFLAFQYPVEIPGVATMQFLKVAMNEQR
CCCCCCEECCCCEEECCCCEEEECCHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
KARGEDELTTPDFMRRVKDAAGKLQINTEMLKRPLNVGFSGGEKKRAEILQMALLEPKLC
HHCCCCCCCCHHHHHHHHHHHCEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEE
VLDETDSGLDIDALKIVADGVNALRSPDRAVVVITHYQRLLDYIVPDTVHVLYKGQVIKS
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCEEEEEECEEEEC
GDKTLAHELEANGYADIIGAAA
CCHHHHHHHCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]