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The map label for this gene is sufD [C]

Identifier: 209549491

GI number: 209549491

Start: 1941164

End: 1942438

Strand: Reverse

Name: sufD [C]

Synonym: Rleg2_1897

Alternate gene names: 209549491

Gene position: 1942438-1941164 (Counterclockwise)

Preceding gene: 209549492

Following gene: 209549490

Centisome position: 42.8

GC content: 63.53

Gene sequence:

>1275_bases
ATGAACATGCAGACGACGAGCCGCCTTACTGCGGCCGAAACGGCGCTGATCGAGGCTTTCAACCATCAGATCGGCGATCT
GCCGGGCAATGGTGCGGTGACGGCGCTGCGCGACCGGCTTCTCGATGATCTGAAGAAGGCCGGCCTGCCGACGCGCCGCA
TCGAAGCCTGGCACTACACCGATCTGAAAAACCTGCTGCGCACCTTGCCGCCGCAGGTCGGTGACGCCGGCTCCGACGCG
CTTGAGCCGCTCGTAGACGGCTCCACCGTGCTGGCGGTGATCCAGGGCCATGCCAGCCAGAAGGCTGCCGCCGACGGTCT
TGGCGTTTCGGCCTATAGCGAACATCTGCTCGACGGCTCTGCCGCGGACGGGCTCGATGCGCTCGGCAGCGACGATGCGG
TCGGCCGCATCAATGGCAGCTTCGTGCGCGACGGTTATGTCGTCGACGTGCCTGCCGATACCGAGCTTGACGCTCCGCTC
GAAATCCAGTTCGTCCATGCCGGCGGGCAGACACATACGCGTCTTCCTGTTGCCTTCGCCTCCGGCGTCAAAGCGACGGT
GATCGAGCGTCATCTTGCGGTGACCGGCGATCCGGCGCTCGTGTCCCACGTCAGTGACATCACTGTCGGCGAAGGTGCGG
AGCTGACCTGGATCATCCTGCAGCAGCACGGGGTCGAGGATACGCATCTCGGCCAGATCCGCATCGATCTCGGTGCCGAC
GCCAAGCTTCGCCTGTTCGTCATCAATGCCGGCGGCAAGCTGGTGCGCCAGGAGCTGCATATCAAGGTGACGGGCGAGGG
CGCCGATCTGACGCTGCGCGGGATCAATCTGCTCGGTGCCGACAGCCATACCGACGTGACGATGGTGCTCGGCCACGACG
TGCCGCACACCGGCTCGACCGAAGTGATCCGCAATGTCGTCTTCGACCGCGCCAAGGGTGTTTTCCAGGGCATGATCCGG
GTGGCGCCCGATGCGCAGAAGACCGATGCCAAAATGGCCTGCAACACGCTTCTGATGTCCGACGATGCCGAATTCTCGGT
CAAGCCTGAGCTCGAAATCTTCGCCGACGACGTGCAGTGCGGCCATGGGGCGACGGTGACCGATATCGACGCCAATCATC
TCTATTACATGATGGCGCGCGGCATTCCGGAGAACAAGGCGCGGGCGATGCTCGTCAACGCTTTTGTCGCCGAGATCGTC
GAGGAACTGGAAGACGAGGCCCTGGTCGAAGCGCTGGAAGGCGTGATTTCGGCCTGGCTCGAAAAGCACGCCTGA

Upstream 100 bases:

>100_bases
CAAGTCTGGCGACAAGACGCTGGCGCATGAGCTGGAAGCCAATGGTTATGCCGACATCATCGGCGCGGCGGCCTGATCTC
GGGTGGAAAGGACGACGTCC

Downstream 100 bases:

>100_bases
TCGGATATAGCAATGGACAAGATCGTGCCGGCCACGCCATACGATGTCGAAGCCATCCGCCGGGATTTTCCGATCCTGGC
GGAGAAGGTGCACGGCAAGC

Product: FeS assembly protein SufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MNMQTTSRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTLPPQVGDAGSDA
LEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGSAADGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPL
EIQFVHAGGQTHTRLPVAFASGVKATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGAD
AKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVVFDRAKGVFQGMIR
VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIV
EELEDEALVEALEGVISAWLEKHA

Sequences:

>Translated_424_residues
MNMQTTSRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTLPPQVGDAGSDA
LEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGSAADGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPL
EIQFVHAGGQTHTRLPVAFASGVKATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGAD
AKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVVFDRAKGVFQGMIR
VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIV
EELEDEALVEALEGVISAWLEKHA
>Mature_424_residues
MNMQTTSRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYTDLKNLLRTLPPQVGDAGSDA
LEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGSAADGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPL
EIQFVHAGGQTHTRLPVAFASGVKATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGAD
AKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGSTEVIRNVVFDRAKGVFQGMIR
VAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQCGHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIV
EELEDEALVEALEGVISAWLEKHA

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=386, Percent_Identity=28.7564766839378, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI87081955, Length=307, Percent_Identity=20.1954397394137, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45192; Mature: 45192

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMQTTSRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYT
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEEEHH
DLKNLLRTLPPQVGDAGSDALEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGS
HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHCCCC
AADGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQTHTRLPVAFA
CCCCCHHCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
SGVKATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGAD
CCCHHEEHHHHHEECCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCC
AKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGST
CEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCH
EVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCEEECCCCEEEECCCCC
GHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWL
CCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKHA
HHCC
>Mature Secondary Structure
MNMQTTSRLTAAETALIEAFNHQIGDLPGNGAVTALRDRLLDDLKKAGLPTRRIEAWHYT
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEEEHH
DLKNLLRTLPPQVGDAGSDALEPLVDGSTVLAVIQGHASQKAAADGLGVSAYSEHLLDGS
HHHHHHHHCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCHHHHHCCCCHHHHHHHHCCCC
AADGLDALGSDDAVGRINGSFVRDGYVVDVPADTELDAPLEIQFVHAGGQTHTRLPVAFA
CCCCCHHCCCCCCCCCCCCCEEECCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
SGVKATVIERHLAVTGDPALVSHVSDITVGEGAELTWIILQQHGVEDTHLGQIRIDLGAD
CCCHHEEHHHHHEECCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCC
AKLRLFVINAGGKLVRQELHIKVTGEGADLTLRGINLLGADSHTDVTMVLGHDVPHTGST
CEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCH
EVIRNVVFDRAKGVFQGMIRVAPDAQKTDAKMACNTLLMSDDAEFSVKPELEIFADDVQC
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCEEECCCCEEEECCCCC
GHGATVTDIDANHLYYMMARGIPENKARAMLVNAFVAEIVEELEDEALVEALEGVISAWL
CCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKHA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]