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The map label for this gene is yieP [H]

Identifier: 209549320

GI number: 209549320

Start: 1760537

End: 1761322

Strand: Direct

Name: yieP [H]

Synonym: Rleg2_1724

Alternate gene names: 209549320

Gene position: 1760537-1761322 (Clockwise)

Preceding gene: 209549319

Following gene: 209549321

Centisome position: 38.8

GC content: 61.83

Gene sequence:

>786_bases
TTGCGCAACAAATTGGACGAGACCCGCAAGACGGGGCGCAGAACCCGGACGAGCCACGCACAGGTGGTCGACGAACTCGG
CAAGGAAATCGTCGCCGGCACCTATCCCGTCGGCACCATCCTGCCGGGCGACACCGAACTGGCGCAGCGCTTCAAGGTGT
CCCGTACCGTCTTGCGTGAGACGATGAAGACGCTTGCCGCCAAGGGCATGGTCGTCGCCAAGGCGCGGGTCGGCACGCGT
GTGACCGAAAAGAACCTTTGGAACATGTTCGACAGCGAGATCATCGCCTGGCATTTCGACAATGGCGTGACGGAAGAGTT
CCTGCTGCAGCTCTACGATATTCGTCTCGCCATCGAACCCTTCGCCGCCGGTCTCGTCGCCGAACGGGCGAATGCCGAGG
ATATCGAGACGCTACGCGCATTGGCGCTCGAGATGGCGGCGAGCGGCCATACCGCCGACAGCCTTGCGCTCGCCGACCTT
AACTTTCACCTGGCGCTCGCCGAAGCTTCCCACAATCCCTTCATGCGCACCTTGGGCAGCCTCATCGAAGCGGCCCTCGT
CGGCATGTTCCGCATGAGCACGCCGCCATCCGAAAACGGGTTTGCCAATATCGCCGACACCCATATGCGCATCGTCGACG
CGATCGTTTCCGGCGACAGCCTTGCTGCGCGCCGCGCCATGGAGCTCGTCATTCTGGATGGCCGCCATCATGTGCACGAG
GCCTTCGTCGCCCGTGGTTCCGAGACCGTCATAGTGCCGATTTCGACCGAAATTTCACATCAGTAA

Upstream 100 bases:

>100_bases
CCTGATTGGGCTTTTGCTGTTTGCATTCATCCTGATGCAGAAAGCCATCCTGTTCGTTTCCAGTCTGAACAAGAGGTACG
CCTGAGGGGAGAGGGATTGC

Downstream 100 bases:

>100_bases
AGGCATTGCTGACTGCGGCGCCATGCATCTTTTGGGGCGCGCAAAGCACGCTGCAAGGCTTTCAATCCGCGCCGCGTGCT
TTCCGAAAATCGATTCCGAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRNKLDETRKTGRRTRTSHAQVVDELGKEIVAGTYPVGTILPGDTELAQRFKVSRTVLRETMKTLAAKGMVVAKARVGTR
VTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAIEPFAAGLVAERANAEDIETLRALALEMAASGHTADSLALADL
NFHLALAEASHNPFMRTLGSLIEAALVGMFRMSTPPSENGFANIADTHMRIVDAIVSGDSLAARRAMELVILDGRHHVHE
AFVARGSETVIVPISTEISHQ

Sequences:

>Translated_261_residues
MRNKLDETRKTGRRTRTSHAQVVDELGKEIVAGTYPVGTILPGDTELAQRFKVSRTVLRETMKTLAAKGMVVAKARVGTR
VTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAIEPFAAGLVAERANAEDIETLRALALEMAASGHTADSLALADL
NFHLALAEASHNPFMRTLGSLIEAALVGMFRMSTPPSENGFANIADTHMRIVDAIVSGDSLAARRAMELVILDGRHHVHE
AFVARGSETVIVPISTEISHQ
>Mature_261_residues
MRNKLDETRKTGRRTRTSHAQVVDELGKEIVAGTYPVGTILPGDTELAQRFKVSRTVLRETMKTLAAKGMVVAKARVGTR
VTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAIEPFAAGLVAERANAEDIETLRALALEMAASGHTADSLALADL
NFHLALAEASHNPFMRTLGSLIEAALVGMFRMSTPPSENGFANIADTHMRIVDAIVSGDSLAARRAMELVILDGRHHVHE
AFVARGSETVIVPISTEISHQ

Specific function: Repressor For The Dgorkat Operon. Binds D-Galactonate As An Inducer. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994961, Length=216, Percent_Identity=36.1111111111111, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI48994955, Length=206, Percent_Identity=29.6116504854369, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1786303, Length=219, Percent_Identity=31.9634703196347, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790032, Length=217, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790780, Length=215, Percent_Identity=31.6279069767442, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28641; Mature: 28641

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKLDETRKTGRRTRTSHAQVVDELGKEIVAGTYPVGTILPGDTELAQRFKVSRTVLRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHH
TMKTLAAKGMVVAKARVGTRVTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAIEP
HHHHHHHCCEEEEEHHHCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
FAAGLVAERANAEDIETLRALALEMAASGHTADSLALADLNFHLALAEASHNPFMRTLGS
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCCHHHHHHHH
LIEAALVGMFRMSTPPSENGFANIADTHMRIVDAIVSGDSLAARRAMELVILDGRHHVHE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHH
AFVARGSETVIVPISTEISHQ
HHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRNKLDETRKTGRRTRTSHAQVVDELGKEIVAGTYPVGTILPGDTELAQRFKVSRTVLRE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHH
TMKTLAAKGMVVAKARVGTRVTEKNLWNMFDSEIIAWHFDNGVTEEFLLQLYDIRLAIEP
HHHHHHHCCEEEEEHHHCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
FAAGLVAERANAEDIETLRALALEMAASGHTADSLALADLNFHLALAEASHNPFMRTLGS
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECEEEEEEECCCCCHHHHHHHH
LIEAALVGMFRMSTPPSENGFANIADTHMRIVDAIVSGDSLAARRAMELVILDGRHHVHE
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCHHHHH
AFVARGSETVIVPISTEISHQ
HHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]