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The map label for this gene is yjfF [H]

Identifier: 209549319

GI number: 209549319

Start: 1759553

End: 1760521

Strand: Direct

Name: yjfF [H]

Synonym: Rleg2_1723

Alternate gene names: 209549319

Gene position: 1759553-1760521 (Clockwise)

Preceding gene: 209549318

Following gene: 209549320

Centisome position: 38.77

GC content: 59.24

Gene sequence:

>969_bases
ATGAACTCCAAATACCTGCCGCTGCTGGCGACCATCGTCATCTTCGTGCTCGCCTATGCCGGCTGCACGCTGCAATATCC
GAACATGCTGTCGACCCGCGTCATCGGCAATCTCCTGACCGACAACGCCTTCCTCGGCATTGCCGCCGTCGGCATGACCT
TCGTTATCATCTCCGGCGGCATCGATCTGTCGATCGGATCGATTATCGCTTTCACCGGCGTCTTCCTGGCGGTGATCCTG
CAGAAAACCTCGATCCATCCGCTGCTCGCCTTCGCATTGGTGCTCGTCATCACCACTGCCTTCGGCGCGGTCATGGGCGC
GATCATCCATTATCTCGAAATGCCGGCCTTCATCGTCACGCTTGCCGGCATGTTCCTGGCGCGCGGCATGGCCTTCGTGC
TCTCGATCGACAGCATTCCGATCGACCACGAATATTATTCGACGCTGACCAGCCTCTATTGGCGGCTGCCCGGCGGCGGA
CGGCTGACGCTGATCGGCGCCATCATGCTACTGGTCTTTGCCGTCGGCATTTTCATCGCCCAGCGGACCCGCTTCGGCAC
CAATGTCTATGCGCTCGGCGGCGGCCCGCAGACGGCGCGGCTGATGGGTGTGCCTGTGGGACGCACGACAATCCAGATTT
ATGCGCTGTCGGGCTTTCTGGCAGGCCTTTCCGGGATCGTTTTTTCGCTGTACACCTCTGCCGGATATTCTCTTGCAGCA
GTCGGTGTCGAACTCGATGCCATCGCGGCGGTCGTCATTGGGGGGACGCTGCTGACCGGAGGAGCGGGATTCGTGGCGGG
AACCTTGATCGGTATCCTGATCCAGGGGCTCATTCAGACCTACATCACCTTCGACGGTACGCTGTCGAGCTGGTGGACCA
AGATCCTGATTGGGCTTTTGCTGTTTGCATTCATCCTGATGCAGAAAGCCATCCTGTTCGTTTCCAGTCTGAACAAGAGG
TACGCCTGA

Upstream 100 bases:

>100_bases
AGGCGGTCATCATTATCGTCATCCTCGTCATCCAGTCGCCGGCGGTGCAATCGCTCGCCATCTTCGCCAGCCGCCGGCAG
GGCGGAAGGGAGCAGCCGAA

Downstream 100 bases:

>100_bases
GGGGAGAGGGATTGCTTGCGCAACAAATTGGACGAGACCCGCAAGACGGGGCGCAGAACCCGGACGAGCCACGCACAGGT
GGTCGACGAACTCGGCAAGG

Product: inner membrane ABC transporter permease YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MNSKYLPLLATIVIFVLAYAGCTLQYPNMLSTRVIGNLLTDNAFLGIAAVGMTFVIISGGIDLSIGSIIAFTGVFLAVIL
QKTSIHPLLAFALVLVITTAFGAVMGAIIHYLEMPAFIVTLAGMFLARGMAFVLSIDSIPIDHEYYSTLTSLYWRLPGGG
RLTLIGAIMLLVFAVGIFIAQRTRFGTNVYALGGGPQTARLMGVPVGRTTIQIYALSGFLAGLSGIVFSLYTSAGYSLAA
VGVELDAIAAVVIGGTLLTGGAGFVAGTLIGILIQGLIQTYITFDGTLSSWWTKILIGLLLFAFILMQKAILFVSSLNKR
YA

Sequences:

>Translated_322_residues
MNSKYLPLLATIVIFVLAYAGCTLQYPNMLSTRVIGNLLTDNAFLGIAAVGMTFVIISGGIDLSIGSIIAFTGVFLAVIL
QKTSIHPLLAFALVLVITTAFGAVMGAIIHYLEMPAFIVTLAGMFLARGMAFVLSIDSIPIDHEYYSTLTSLYWRLPGGG
RLTLIGAIMLLVFAVGIFIAQRTRFGTNVYALGGGPQTARLMGVPVGRTTIQIYALSGFLAGLSGIVFSLYTSAGYSLAA
VGVELDAIAAVVIGGTLLTGGAGFVAGTLIGILIQGLIQTYITFDGTLSSWWTKILIGLLLFAFILMQKAILFVSSLNKR
YA
>Mature_322_residues
MNSKYLPLLATIVIFVLAYAGCTLQYPNMLSTRVIGNLLTDNAFLGIAAVGMTFVIISGGIDLSIGSIIAFTGVFLAVIL
QKTSIHPLLAFALVLVITTAFGAVMGAIIHYLEMPAFIVTLAGMFLARGMAFVLSIDSIPIDHEYYSTLTSLYWRLPGGG
RLTLIGAIMLLVFAVGIFIAQRTRFGTNVYALGGGPQTARLMGVPVGRTTIQIYALSGFLAGLSGIVFSLYTSAGYSLAA
VGVELDAIAAVVIGGTLLTGGAGFVAGTLIGILIQGLIQTYITFDGTLSSWWTKILIGLLLFAFILMQKAILFVSSLNKR
YA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=311, Percent_Identity=63.9871382636656, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI1788896, Length=320, Percent_Identity=34.6875, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1790191, Length=286, Percent_Identity=37.4125874125874, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI145693152, Length=300, Percent_Identity=32.3333333333333, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787794, Length=291, Percent_Identity=29.553264604811, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789992, Length=135, Percent_Identity=38.5185185185185, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1790524, Length=262, Percent_Identity=29.7709923664122, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788471, Length=220, Percent_Identity=33.1818181818182, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=28.2608695652174, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34016; Mature: 34016

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKYLPLLATIVIFVLAYAGCTLQYPNMLSTRVIGNLLTDNAFLGIAAVGMTFVIISGG
CCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECC
IDLSIGSIIAFTGVFLAVILQKTSIHPLLAFALVLVITTAFGAVMGAIIHYLEMPAFIVT
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFLARGMAFVLSIDSIPIDHEYYSTLTSLYWRLPGGGRLTLIGAIMLLVFAVGIFIA
HHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QRTRFGTNVYALGGGPQTARLMGVPVGRTTIQIYALSGFLAGLSGIVFSLYTSAGYSLAA
HHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEE
VGVELDAIAAVVIGGTLLTGGAGFVAGTLIGILIQGLIQTYITFDGTLSSWWTKILIGLL
ECCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFAFILMQKAILFVSSLNKRYA
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSKYLPLLATIVIFVLAYAGCTLQYPNMLSTRVIGNLLTDNAFLGIAAVGMTFVIISGG
CCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECC
IDLSIGSIIAFTGVFLAVILQKTSIHPLLAFALVLVITTAFGAVMGAIIHYLEMPAFIVT
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGMFLARGMAFVLSIDSIPIDHEYYSTLTSLYWRLPGGGRLTLIGAIMLLVFAVGIFIA
HHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QRTRFGTNVYALGGGPQTARLMGVPVGRTTIQIYALSGFLAGLSGIVFSLYTSAGYSLAA
HHHCCCCEEEEECCCCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEE
VGVELDAIAAVVIGGTLLTGGAGFVAGTLIGILIQGLIQTYITFDGTLSSWWTKILIGLL
ECCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFAFILMQKAILFVSSLNKRYA
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]