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The map label for this gene is ybdA [C]

Identifier: 209549268

GI number: 209549268

Start: 1700492

End: 1702090

Strand: Direct

Name: ybdA [C]

Synonym: Rleg2_1670

Alternate gene names: 209549268

Gene position: 1700492-1702090 (Clockwise)

Preceding gene: 209549267

Following gene: 209549276

Centisome position: 37.47

GC content: 60.29

Gene sequence:

>1599_bases
ATGAGTGCCGCTAAAACGTCCGGGGGCACTTTCGCTCCTCTTGCGCAGCCCGTCTTTGCGGTTCTCTGGATCGCTACGGT
TCTCGGCAACACCGGCAGCTTCATGCGCGACGTCGCCAGTTCCTGGCTGATGACGGATCTTTCTGCATCGCCTGCCGCAG
TTGCCATGGTTCAGGCGGCCGGAACCCTGCCGATTTTCCTGCTTGCCATTCCGGCAGGCGTTCTCACGGACATTCTCGAT
CGCCGCAAATTCCTGATCGCCGTCCAGCTTTTGCTGGCATCAGTCAGCATTTCGCTGATGGTTCTGTCGCAGACGGGGAT
GTTGTCGGTCAGCGCGCTGATCGGTCTGACCTTCCTTGGCGGCATCGGTGCCGCTCTGATGGGACCGACCTGGCAGGCGA
TCGTGCCGGAACTGGTGAAACGCGAGGATGTGAAGAGCGCGGTCGCTCTCAATTCGCTCGGCATCAATATCGCCCGCTCT
ATCGGGCCAGCTGCTGGTGGCCTGCTTCTAGCAGCCTTTGGAGCCGGGATCACTTATGGGGCGGACGTTGCCAGCTACTT
CGCCGTGATCGCGGCTCTGGTCTGGTGGCCAAGAGCAAAGAATGCCGACGACGTGCTTCAGGAGAACTTCTTCGGTGCGT
TTCGGGCCGGACTTCGCTACACCCGCTCAAGCACCACGCTCCATGTGGTTCTGCTGCGCGCCGCAATCTTTTTCGCCTTC
GCCAGTGCTGTTTGGGCTCTTCTTCCCCTCGTTGCCCGGCAACTGCTCGACGGTGGCGCCAGCTTCTACGGTATCCTGCT
TGGTGCCGTCGGCACAGGCGCGATCGGCGGTGCCTTGGTCATGCCCAAGCTGCGCCAACGCCTGAGTTCTGATGGTTTGC
TTCTCGGCGCAGCACTCGTCACTGCAGTCGTCATGGGTGTCCTGTCGCTTGCCCCGCCGAAGATTGTCGCCATCATTGTT
CTTCTTTTCCTCGGTGGCGCATGGATCACCGCGCTCACAACGCTCAACGGCGCAGCGCAGGCAGTGCTTCCCAACTGGGT
GCGCGGTCGTGGCCTTGCCGTCTATCTGACTGTCTTCAACGGTGCGATGACAGCCGGAAGCCTAGGCTGGGGTGCGGTCG
GCGAGGCTGTCGGCATCCAGGCTACCTTGCTTATCGGAGCCGTCGGACTGCTCGTTGCCGGTTTCATCATGCACCGCCTG
AAGCTTCCGACCGGTGATGCCGACATGGTGCCCTCAAACCATTGGCCCGAGCCGCTGGTGGCTGAACCTGTTGCCCACGA
TCGAGGCCCGGTTCTGATCTTGATCGAATACAAGGTCGAAAAGGAGCACCGCAGCGCATTCCTGCACGCCATCGATCATC
TCTCCAAGGAGCGTCGCCGCGATGGTGCCTATGGATGGGGTATCACGGAGGATTCGGCCGACCCAGAAAAGATCGTCGAA
TGGTTCATGGTGGAATCCTGGGCCGAACATCTTCGCCAGCATAAGAGGGTTTCCAACGCTGACGCCGACCTGCAAAGCAA
AGTGCTCGGCTACCATATCGGTCCCGACAAACCAGTTGTCCGTCACTTCCTGACGATTAATCGGCCTGATGCCGCATAA

Upstream 100 bases:

>100_bases
TGGATCGCATGATGGCGACCAACGCCTTCTTCGAACACCTTGGCCTCGCAGGCGCATTCGTCTTCGTTGCAGCATTTGAT
CTCACCAATGGAGGAGACAA

Downstream 100 bases:

>100_bases
CAAACGCGTAGGGCATGGCGGCTTCGGCCGCCATTTCATCATCTCGGCGGACGCAATGAAGTGAAATTGACGCATTTGCG
ACTGGCAGCATTCAGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; MFS Permease; Integral Membrane Efflux Protein; MFS Family Transporter; Facilitator Superfamily Permease; Multidrug ABC Transporter; MFS Transporter; Permease; Permeases Of Facilitator Superfamily; Transporter Facilitator Family; Facilitator Superfamily; Arabinose Efflux Permease Family Protein; Facilitator Superfamily Transporter; Transmembrane Efflux Protein; Transport Transmembrane Protein; MFS Family Transporter Protein; Mfs Transporter; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Permease Of Facilitator Superfamily Protein; ABC Transporter Permease Protein; Facilitator Transpoter; Macrolide-Efflux Protein; Facilitator Superfamily Multidrug Efflux Transporter; Permease Of Facilitator Superfamily; Transporter Facilitator Family Protein; Dioxygenase; MFS Family Diterpenoid Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter

Number of amino acids: Translated: 532; Mature: 531

Protein sequence:

>532_residues
MSAAKTSGGTFAPLAQPVFAVLWIATVLGNTGSFMRDVASSWLMTDLSASPAAVAMVQAAGTLPIFLLAIPAGVLTDILD
RRKFLIAVQLLLASVSISLMVLSQTGMLSVSALIGLTFLGGIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARS
IGPAAGGLLLAAFGAGITYGADVASYFAVIAALVWWPRAKNADDVLQENFFGAFRAGLRYTRSSTTLHVVLLRAAIFFAF
ASAVWALLPLVARQLLDGGASFYGILLGAVGTGAIGGALVMPKLRQRLSSDGLLLGAALVTAVVMGVLSLAPPKIVAIIV
LLFLGGAWITALTTLNGAAQAVLPNWVRGRGLAVYLTVFNGAMTAGSLGWGAVGEAVGIQATLLIGAVGLLVAGFIMHRL
KLPTGDADMVPSNHWPEPLVAEPVAHDRGPVLILIEYKVEKEHRSAFLHAIDHLSKERRRDGAYGWGITEDSADPEKIVE
WFMVESWAEHLRQHKRVSNADADLQSKVLGYHIGPDKPVVRHFLTINRPDAA

Sequences:

>Translated_532_residues
MSAAKTSGGTFAPLAQPVFAVLWIATVLGNTGSFMRDVASSWLMTDLSASPAAVAMVQAAGTLPIFLLAIPAGVLTDILD
RRKFLIAVQLLLASVSISLMVLSQTGMLSVSALIGLTFLGGIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARS
IGPAAGGLLLAAFGAGITYGADVASYFAVIAALVWWPRAKNADDVLQENFFGAFRAGLRYTRSSTTLHVVLLRAAIFFAF
ASAVWALLPLVARQLLDGGASFYGILLGAVGTGAIGGALVMPKLRQRLSSDGLLLGAALVTAVVMGVLSLAPPKIVAIIV
LLFLGGAWITALTTLNGAAQAVLPNWVRGRGLAVYLTVFNGAMTAGSLGWGAVGEAVGIQATLLIGAVGLLVAGFIMHRL
KLPTGDADMVPSNHWPEPLVAEPVAHDRGPVLILIEYKVEKEHRSAFLHAIDHLSKERRRDGAYGWGITEDSADPEKIVE
WFMVESWAEHLRQHKRVSNADADLQSKVLGYHIGPDKPVVRHFLTINRPDAA
>Mature_531_residues
SAAKTSGGTFAPLAQPVFAVLWIATVLGNTGSFMRDVASSWLMTDLSASPAAVAMVQAAGTLPIFLLAIPAGVLTDILDR
RKFLIAVQLLLASVSISLMVLSQTGMLSVSALIGLTFLGGIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARSI
GPAAGGLLLAAFGAGITYGADVASYFAVIAALVWWPRAKNADDVLQENFFGAFRAGLRYTRSSTTLHVVLLRAAIFFAFA
SAVWALLPLVARQLLDGGASFYGILLGAVGTGAIGGALVMPKLRQRLSSDGLLLGAALVTAVVMGVLSLAPPKIVAIIVL
LFLGGAWITALTTLNGAAQAVLPNWVRGRGLAVYLTVFNGAMTAGSLGWGAVGEAVGIQATLLIGAVGLLVAGFIMHRLK
LPTGDADMVPSNHWPEPLVAEPVAHDRGPVLILIEYKVEKEHRSAFLHAIDHLSKERRRDGAYGWGITEDSADPEKIVEW
FMVESWAEHLRQHKRVSNADADLQSKVLGYHIGPDKPVVRHFLTINRPDAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56032; Mature: 55901

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAKTSGGTFAPLAQPVFAVLWIATVLGNTGSFMRDVASSWLMTDLSASPAAVAMVQAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GTLPIFLLAIPAGVLTDILDRRKFLIAVQLLLASVSISLMVLSQTGMLSVSALIGLTFLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
GIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARSIGPAAGGLLLAAFGAGITYG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCH
ADVASYFAVIAALVWWPRAKNADDVLQENFFGAFRAGLRYTRSSTTLHVVLLRAAIFFAF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASAVWALLPLVARQLLDGGASFYGILLGAVGTGAIGGALVMPKLRQRLSSDGLLLGAALV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TAVVMGVLSLAPPKIVAIIVLLFLGGAWITALTTLNGAAQAVLPNWVRGRGLAVYLTVFN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCEEEEEEECC
GAMTAGSLGWGAVGEAVGIQATLLIGAVGLLVAGFIMHRLKLPTGDADMVPSNHWPEPLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AEPVAHDRGPVLILIEYKVEKEHRSAFLHAIDHLSKERRRDGAYGWGITEDSADPEKIVE
CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
WFMVESWAEHLRQHKRVSNADADLQSKVLGYHIGPDKPVVRHFLTINRPDAA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SAAKTSGGTFAPLAQPVFAVLWIATVLGNTGSFMRDVASSWLMTDLSASPAAVAMVQAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
GTLPIFLLAIPAGVLTDILDRRKFLIAVQLLLASVSISLMVLSQTGMLSVSALIGLTFLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHH
GIGAALMGPTWQAIVPELVKREDVKSAVALNSLGINIARSIGPAAGGLLLAAFGAGITYG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCH
ADVASYFAVIAALVWWPRAKNADDVLQENFFGAFRAGLRYTRSSTTLHVVLLRAAIFFAF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
ASAVWALLPLVARQLLDGGASFYGILLGAVGTGAIGGALVMPKLRQRLSSDGLLLGAALV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TAVVMGVLSLAPPKIVAIIVLLFLGGAWITALTTLNGAAQAVLPNWVRGRGLAVYLTVFN
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCEEEEEEECC
GAMTAGSLGWGAVGEAVGIQATLLIGAVGLLVAGFIMHRLKLPTGDADMVPSNHWPEPLV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
AEPVAHDRGPVLILIEYKVEKEHRSAFLHAIDHLSKERRRDGAYGWGITEDSADPEKIVE
CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
WFMVESWAEHLRQHKRVSNADADLQSKVLGYHIGPDKPVVRHFLTINRPDAA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA