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The map label for this gene is scpB [H]

Identifier: 209549087

GI number: 209549087

Start: 1518688

End: 1519404

Strand: Direct

Name: scpB [H]

Synonym: Rleg2_1486

Alternate gene names: 209549087

Gene position: 1518688-1519404 (Clockwise)

Preceding gene: 209549086

Following gene: 209549088

Centisome position: 33.47

GC content: 64.57

Gene sequence:

>717_bases
TTGATCGATCCGAAGAGCGACGAGGATTTCGAAGACGATTTCGAAGGCAGGAGCCGTGACCTGCAGGCCGAGATCGAGGC
AGAGCGCATCGCCGAGGCGCTGGTCTTTGCCTCCTCGCAACCGGTCTCCGAAGGCTTCCTCGCCGAGCGCCTGCCCGAGA
AGACCGATGTCCGCGCCATCATGCTGCGCCTGAAGGCGCACTATGCGCCGCGCGGCGTCAACCTCGTGCAGATCGAGGGC
GCCTGGGCCTTCCGCACCGCCGCCGATCTCTCCGTCGTCATCCGCCGCGATGACAACGAGGTGAAGAAGCTCTCGCGCGC
CGCATTGGAAGTGCTGGCGATCATTGCCTATCACCAGCCGGTGACGCGCGCCGAGATCGAGGATATCCGCGGCGTCCAGA
CCTCGCGCGGCACGCTCGACGTGCTGATGGAAGCCGGCTGGGTGCGGTTCCGCGGCCGCCGGCGTACGCCGGGCCGGCCG
GTGACATTGGGCACCACACGCGATTTCCTCGACCATTTCGGTCTCGAAGAGCTGCGTGACCTGCCCGGTCTCGAAGAATT
GAAGGGCGCGGGCTTGCTGTCGGGCCGCATTCCGGCGAATTTCAATATTCCCTCGCCGTTGATGAACGACGAACTGACCG
AGGACGAGGATCCGATCACCCAGATGGATCTCGAGGAATTAGGGTTGCTGGCGCCGCGCGGCACCTCCGAAGATTGA

Upstream 100 bases:

>100_bases
GCAAGCTGGAAATCCGCCAGGACGGCGCCTTTCAGCCGATATACATGCGCCGCGGACCAAAATACGCCACGCTGCAGGTG
GTGGAGCAGGAGCAGCCGGC

Downstream 100 bases:

>100_bases
AGGACTTCGTCTTGCTTTCGCCATGCATGGCGAAAACAATGGCGGCCATCACTTTTCGACCGGTCAATGGCTTGTCACAA
AGGGCGATACCGTGACATTA

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MIDPKSDEDFEDDFEGRSRDLQAEIEAERIAEALVFASSQPVSEGFLAERLPEKTDVRAIMLRLKAHYAPRGVNLVQIEG
AWAFRTAADLSVVIRRDDNEVKKLSRAALEVLAIIAYHQPVTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRP
VTLGTTRDFLDHFGLEELRDLPGLEELKGAGLLSGRIPANFNIPSPLMNDELTEDEDPITQMDLEELGLLAPRGTSED

Sequences:

>Translated_238_residues
MIDPKSDEDFEDDFEGRSRDLQAEIEAERIAEALVFASSQPVSEGFLAERLPEKTDVRAIMLRLKAHYAPRGVNLVQIEG
AWAFRTAADLSVVIRRDDNEVKKLSRAALEVLAIIAYHQPVTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRP
VTLGTTRDFLDHFGLEELRDLPGLEELKGAGLLSGRIPANFNIPSPLMNDELTEDEDPITQMDLEELGLLAPRGTSED
>Mature_238_residues
MIDPKSDEDFEDDFEGRSRDLQAEIEAERIAEALVFASSQPVSEGFLAERLPEKTDVRAIMLRLKAHYAPRGVNLVQIEG
AWAFRTAADLSVVIRRDDNEVKKLSRAALEVLAIIAYHQPVTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRP
VTLGTTRDFLDHFGLEELRDLPGLEELKGAGLLSGRIPANFNIPSPLMNDELTEDEDPITQMDLEELGLLAPRGTSED

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 26619; Mature: 26619

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDPKSDEDFEDDFEGRSRDLQAEIEAERIAEALVFASSQPVSEGFLAERLPEKTDVRAI
CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
MLRLKAHYAPRGVNLVQIEGAWAFRTAADLSVVIRRDDNEVKKLSRAALEVLAIIAYHQP
HHHHHHHCCCCCCEEEEECCCEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
VTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRPVTLGTTRDFLDHFGLEELRD
CHHHHHHHHCCCCCCCCHHHHHHHCCHHEECCCCCCCCCCEEECCHHHHHHHCCHHHHHH
LPGLEELKGAGLLSGRIPANFNIPSPLMNDELTEDEDPITQMDLEELGLLAPRGTSED
CCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIDPKSDEDFEDDFEGRSRDLQAEIEAERIAEALVFASSQPVSEGFLAERLPEKTDVRAI
CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
MLRLKAHYAPRGVNLVQIEGAWAFRTAADLSVVIRRDDNEVKKLSRAALEVLAIIAYHQP
HHHHHHHCCCCCCEEEEECCCEEEHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
VTRAEIEDIRGVQTSRGTLDVLMEAGWVRFRGRRRTPGRPVTLGTTRDFLDHFGLEELRD
CHHHHHHHHCCCCCCCCHHHHHHHCCHHEECCCCCCCCCCEEECCHHHHHHHCCHHHHHH
LPGLEELKGAGLLSGRIPANFNIPSPLMNDELTEDEDPITQMDLEELGLLAPRGTSED
CCCHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]