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The map label for this gene is scpA [H]

Identifier: 209549086

GI number: 209549086

Start: 1517834

End: 1518691

Strand: Direct

Name: scpA [H]

Synonym: Rleg2_1485

Alternate gene names: 209549086

Gene position: 1517834-1518691 (Clockwise)

Preceding gene: 209549085

Following gene: 209549087

Centisome position: 33.45

GC content: 64.1

Gene sequence:

>858_bases
GTGATCACGGTCAAGGGCACGGAGCGTCCGCAGGCGGCAACGCCGATGGACAAGTTGTGGCAGGAGAACGGCGCCGAGCG
CGCCAGCCACGAGCCGGCGCTGGTGATCGATGTCGCCGGCTTTGAAGGCCCGCTCGATCTGTTGCTCTATCTCGCCCGAA
ACCAGAAGGTCGATCTGTCGCGCATTTCGGTGCTGGCGCTGGCCGAGCAATATTTGCAGTTCGTCGAAAGCGCCCGGCGC
ATCCGCATCGAGCTTGCCGCCGATTATCTCGTCATGGCGGCCTGGCTTGCCTATCTCAAGTCGCGGCTGCTGATACCCCA
GCAGATCAAGGATGACGGTCCTTCGGGCGAGGAGATGGCGGCAACGCTCGCCTTCCGGCTGAAACGCCTCGAAGCCATGC
GCCAGGCCGCCGAAGGCCTCGTCAACCGCAACCGCCTCGGCCGCGACATCTTCGTGCGCGGCGCCCCCGAGCATATTCCC
GACCGGCAGCAATCCGCCTATGCGGCAAGCCTCTACGATCTTCTGACCGCCTATGCGGCGCTCCGCCAGCGCAATGCCGT
CACTCAGGTGACGATCGAGAGGCGTAACGTCTGGTCGCTGACCGATGCGCGTGAATTGCTGACCCAGATGATCGGCGAGG
TCGGTGACTGGACGGCGATGGAGCATTATCTGCTGCGTTATCTCGCAACGCCCGAGGAACGCGTCACGGCGATCGCCAGC
GCTTTTGCCGCCTCGCTGGAGTTGGTGCGCGAGGGCAAGCTGGAAATCCGCCAGGACGGCGCCTTTCAGCCGATATACAT
GCGCCGCGGACCAAAATACGCCACGCTGCAGGTGGTGGAGCAGGAGCAGCCGGCTTGA

Upstream 100 bases:

>100_bases
GGAAGCAGGTTTTGCCGCGCCGGATGCCGCCGATGAGGCGGAATTGCGGGCGGAATTCGAGGCGATGTTTGCGATCGTGT
GATCGCAGAGGAGCAGGGTG

Downstream 100 bases:

>100_bases
TCGATCCGAAGAGCGACGAGGATTTCGAAGACGATTTCGAAGGCAGGAGCCGTGACCTGCAGGCCGAGATCGAGGCAGAG
CGCATCGCCGAGGCGCTGGT

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MITVKGTERPQAATPMDKLWQENGAERASHEPALVIDVAGFEGPLDLLLYLARNQKVDLSRISVLALAEQYLQFVESARR
IRIELAADYLVMAAWLAYLKSRLLIPQQIKDDGPSGEEMAATLAFRLKRLEAMRQAAEGLVNRNRLGRDIFVRGAPEHIP
DRQQSAYAASLYDLLTAYAALRQRNAVTQVTIERRNVWSLTDARELLTQMIGEVGDWTAMEHYLLRYLATPEERVTAIAS
AFAASLELVREGKLEIRQDGAFQPIYMRRGPKYATLQVVEQEQPA

Sequences:

>Translated_285_residues
MITVKGTERPQAATPMDKLWQENGAERASHEPALVIDVAGFEGPLDLLLYLARNQKVDLSRISVLALAEQYLQFVESARR
IRIELAADYLVMAAWLAYLKSRLLIPQQIKDDGPSGEEMAATLAFRLKRLEAMRQAAEGLVNRNRLGRDIFVRGAPEHIP
DRQQSAYAASLYDLLTAYAALRQRNAVTQVTIERRNVWSLTDARELLTQMIGEVGDWTAMEHYLLRYLATPEERVTAIAS
AFAASLELVREGKLEIRQDGAFQPIYMRRGPKYATLQVVEQEQPA
>Mature_285_residues
MITVKGTERPQAATPMDKLWQENGAERASHEPALVIDVAGFEGPLDLLLYLARNQKVDLSRISVLALAEQYLQFVESARR
IRIELAADYLVMAAWLAYLKSRLLIPQQIKDDGPSGEEMAATLAFRLKRLEAMRQAAEGLVNRNRLGRDIFVRGAPEHIP
DRQQSAYAASLYDLLTAYAALRQRNAVTQVTIERRNVWSLTDARELLTQMIGEVGDWTAMEHYLLRYLATPEERVTAIAS
AFAASLELVREGKLEIRQDGAFQPIYMRRGPKYATLQVVEQEQPA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32153; Mature: 32153

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVKGTERPQAATPMDKLWQENGAERASHEPALVIDVAGFEGPLDLLLYLARNQKVDLS
CEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHH
RISVLALAEQYLQFVESARRIRIELAADYLVMAAWLAYLKSRLLIPQQIKDDGPSGEEMA
HHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHH
ATLAFRLKRLEAMRQAAEGLVNRNRLGRDIFVRGAPEHIPDRQQSAYAASLYDLLTAYAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
LRQRNAVTQVTIERRNVWSLTDARELLTQMIGEVGDWTAMEHYLLRYLATPEERVTAIAS
HHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHH
AFAASLELVREGKLEIRQDGAFQPIYMRRGPKYATLQVVEQEQPA
HHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MITVKGTERPQAATPMDKLWQENGAERASHEPALVIDVAGFEGPLDLLLYLARNQKVDLS
CEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHH
RISVLALAEQYLQFVESARRIRIELAADYLVMAAWLAYLKSRLLIPQQIKDDGPSGEEMA
HHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHH
ATLAFRLKRLEAMRQAAEGLVNRNRLGRDIFVRGAPEHIPDRQQSAYAASLYDLLTAYAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
LRQRNAVTQVTIERRNVWSLTDARELLTQMIGEVGDWTAMEHYLLRYLATPEERVTAIAS
HHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHH
AFAASLELVREGKLEIRQDGAFQPIYMRRGPKYATLQVVEQEQPA
HHHHHHHHHHCCCCEEECCCCCCCHHHCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]